; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02037 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02037
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionferredoxin-thioredoxin reductase, variable chain
Genome locationCarg_Chr04:7919615..7920148
RNA-Seq ExpressionCarg02037
SyntenyCarg02037
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0030148 - sphingolipid biosynthetic process (biological process)
GO:0003951 - NAD+ kinase activity (molecular function)
GO:0017050 - D-erythro-sphingosine kinase activity (molecular function)
InterPro domainsIPR004207 - Ferredoxin thioredoxin reductase, alpha chain
IPR008990 - Electron transport accessory-like domain superfamily
IPR044166 - Ferredoxin-thioredoxin reductase, variable chain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601079.1 hypothetical protein SDJN03_06312, partial [Cucurbita argyrosperma subsp. sororia]5.3e-8799.44Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLK+YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

KAG7031885.1 hypothetical protein SDJN02_05926, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-87100Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

XP_022957590.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita moschata]6.9e-8798.87Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

XP_022999561.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita maxima]1.1e-8497.18Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAA TSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPL VYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

XP_023549490.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]3.4e-8698.31Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+ RGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

TrEMBL top hitse value%identityAlignment
A0A0A0KV36 FeThRed_A domain-containing protein6.1e-7384.53Show/hide
Query:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA
        MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCS+ RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain3.9e-7283.43Show/hide
Query:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA
        MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCS+ RGRR FSEV+V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A5D3D039 Sphingoid long-chain bases kinase 13.9e-7283.43Show/hide
Query:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA
        MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCS+ RGRR FSEV+V+SDSGT SSA AVSAATTSLSE+ETDEA
Subjt:  MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A6J1H0Z6 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like3.3e-8798.87Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

A0A6J1KDF2 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like5.3e-8597.18Show/hide
Query:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR
        MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGRRFFSEVTVKSDSGTLSSAAAVSAA TSLSEDETDEAAAAR
Subjt:  MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        IGARVRVKVPL VYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

SwissProt top hitse value%identityAlignment
P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic1.2e-1736.93Show/hide
Query:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR-RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIG
        M   + V+ +    +   A +        F S  + S +  S++       + TR R     EV +KSDS T       S++++   EDE  +    ++G
Subjt:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR-RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIG

Query:  ARVRVKVPLKVYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
         +V+VK PLKVYHV KLPE +L   M GV+K YV  WKGK +S N P+KVE+ + V  R  VK + HLKEEEFE +
Subjt:  ARVRVKVPLKVYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

P80680 Ferredoxin-thioredoxin reductase, variable chain3.5e-2564.71Show/hide
Query:  DEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFLAHLKEEEFEYV
        + AAA +IG RVRV  PL+VYHV K P+ D++GMEGV+K YV VWKGKRV+AN P+KVEF + VEG+P PV+F AHL+E+EFE+V
Subjt:  DEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFLAHLKEEEFEYV

Q55781 Ferredoxin-thioredoxin reductase, variable chain7.6e-0437.33Show/hide
Query:  IGARVRVKVPLKVYH--VAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEE
        +G RVRV   + VYH    K    DL+GMEG +   +  W+G+ +SANLP  V+F          +F AH + +E
Subjt:  IGARVRVKVPLKVYH--VAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEE

Arabidopsis top hitse value%identityAlignment
AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 22.4e-2944.86Show/hide
Query:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR--------RFFSEVTVKSDSGTLSSAAAVSAATTSLS---EDE
        M NS  + P     A RP  S     +     S   S++S SS +  P + S + GR        R   + T++ D    S+A+  + A  S S   E E
Subjt:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR--------RFFSEVTVKSDSGTLSSAAAVSAATTSLS---EDE

Query:  TDEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
         DE A  +IGARVRV VPLKVYHV ++PE +L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR PVKF  HLKE+EFE +
Subjt:  TDEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 11.8e-2943.48Show/hide
Query:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR------RFFSEVTVKSDSGTLSSAAAVSA----ATTSLSEDET
        M++ I + P  A    RP+ S    S++   ++ +P   +L S +V P +   ++ +      R  S  T++ D   + SA +++A    +++  SE+E 
Subjt:  MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR------RFFSEVTVKSDSGTLSSAAAVSA----ATTSLSEDET

Query:  DEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
        +  A A+IG+RVRV  PLKVYHV ++PE DLEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  VKF++HLKE+EFE++
Subjt:  DEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTA
TTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTA
CTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCT
TTGAAGGTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCT
TCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTA
TTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTA
CTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCT
TTGAAGGTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCT
TCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA
Protein sequenceShow/hide protein sequence
MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVP
LKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV