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Carg02095 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02095
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytoplasmic tRNA 2-thiolation protein 1
Genome locationCarg_Chr15:664433..664684
RNA-Seq ExpressionCarg02095
SyntenyCarg02095
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351382.1 hypothetical protein G4B88_028221 [Cannabis sativa]2.6e-2068.66Show/hide
Query:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPS
        G ++FQMPLHYPRY+K DY++MPEWKLDRLL EYGLPTHG+L YKR FA+GAFLW  + P  K   S
Subjt:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPS

KAG6578420.1 hypothetical protein SDJN03_22868, partial [Cucurbita argyrosperma subsp. sororia]1.3e-43100Show/hide
Query:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKLM
        MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKLM
Subjt:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKLM

PON37357.1 hypothetical protein PanWU01x14_320780 [Parasponia andersonii]2.6e-2069.86Show/hide
Query:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKL
        G ++FQMPLHYPRY+K DY++MPEWKLDRLL EYGL THG+L YKR FA+GAFLW DY  TF  D SLL+ K+
Subjt:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKL

PON65649.1 cytoplasmic tRNA 2-thiolation protein [Trema orientale]1.5e-2070.59Show/hide
Query:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSL
        G ++FQMPLHYPRY+K DY++MPEWKLDRLL EYGL THG+L YKR FA+GAFLW DYH   K   SL
Subjt:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSL

XP_010108400.1 uncharacterized protein LOC21393700 [Morus notabilis]3.1e-2158.14Show/hide
Query:  EKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYH------PTFKL--DPSLLNNKL
        +K + G ++FQMPLHYPRY+K DY++MPEWKLD+LL +YGLPTHG+L YKR FA+GAFLW D+H      P ++   D SLL+ K+
Subjt:  EKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYH------PTFKL--DPSLLNNKL

TrEMBL top hitse value%identityAlignment
A0A200R4Z5 Uncharacterized protein1.6e-2068.12Show/hide
Query:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHP
        MEN +K     ++FQMPLHYPRYS+ DYE+MPEWKLDRLL+EYGLP  G+L YKR++AMGAFLW D  P
Subjt:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHP

A0A2P5ALC9 Uncharacterized protein1.3e-2069.86Show/hide
Query:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKL
        G ++FQMPLHYPRY+K DY++MPEWKLDRLL EYGL THG+L YKR FA+GAFLW DY  TF  D SLL+ K+
Subjt:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKL

A0A2P5CX72 Cytoplasmic tRNA 2-thiolation protein7.4e-2170.59Show/hide
Query:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSL
        G ++FQMPLHYPRY+K DY++MPEWKLDRLL EYGL THG+L YKR FA+GAFLW DYH   K   SL
Subjt:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSL

A0A7J6DZ12 Uncharacterized protein1.3e-2068.66Show/hide
Query:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPS
        G ++FQMPLHYPRY+K DY++MPEWKLDRLL EYGLPTHG+L YKR FA+GAFLW  + P  K   S
Subjt:  GDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPS

W9SNS4 Uncharacterized protein1.5e-2158.14Show/hide
Query:  EKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYH------PTFKL--DPSLLNNKL
        +K + G ++FQMPLHYPRY+K DY++MPEWKLD+LL +YGLPTHG+L YKR FA+GAFLW D+H      P ++   D SLL+ K+
Subjt:  EKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYH------PTFKL--DPSLLNNKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein2.8e-1250.7Show/hide
Query:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYG-LPTHGN-LPYKRQFAMGAFLWHDYHP
        ++ N   +   + F+MPLHYPRY+K DYE M EW+LD LL EYG L  H N L  KR FA+  F+W  +HP
Subjt:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYG-LPTHGN-LPYKRQFAMGAFLWHDYHP

AT3G11405.1 unknown protein4.7e-1263.46Show/hide
Query:  FQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTH-GNLPYKRQFAMGAFLW
        FQMPL YP Y+K  Y+ M E +LDRLL  YGLPT  GNL  K++FA+GAFLW
Subjt:  FQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTH-GNLPYKRQFAMGAFLW

AT3G55570.1 unknown protein6.2e-2052.44Show/hide
Query:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKL
        M+    K G  + F+MPLHYPRYSK DY++MPEWKLDR+L +YGL T+G+L +KR FA+GAFLW             +N+KL
Subjt:  MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKL

AT5G41761.1 unknown protein1.2e-1862.9Show/hide
Query:  NNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLW
        N++K Q   + FQ+PLHYP+Y+K DYE MPEW+LDRLL EYGLP  G+   KR+FA+GAFLW
Subjt:  NNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLW

AT5G55620.1 unknown protein6.2e-1252.46Show/hide
Query:  KKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHD
        KK+   + FQ+PLHYP+YSK DYE M + +LD LL +YG    G+L  KR FA+ +FLW D
Subjt:  KKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAACGAGAAGAAACAAGGAGGAGACAACTTCTTTCAAATGCCACTTCACTATCCCAGATATTCGAAGATGGACTACGAGAACATGCCTGAATGGAAGCTCGA
CCGCCTTCTCCTCGAGTACGGTCTCCCAACACATGGCAACTTGCCCTACAAACGACAATTCGCAATGGGTGCTTTCCTCTGGCATGATTACCACCCTACCTTTAAATTAG
ATCCCTCCCTTCTCAATAACAAACTTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAACGAGAAGAAACAAGGAGGAGACAACTTCTTTCAAATGCCACTTCACTATCCCAGATATTCGAAGATGGACTACGAGAACATGCCTGAATGGAAGCTCGA
CCGCCTTCTCCTCGAGTACGGTCTCCCAACACATGGCAACTTGCCCTACAAACGACAATTCGCAATGGGTGCTTTCCTCTGGCATGATTACCACCCTACCTTTAAATTAG
ATCCCTCCCTTCTCAATAACAAACTTATGTAG
Protein sequenceShow/hide protein sequence
MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKLM