; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02108 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02108
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-CH-type domain-containing protein
Genome locationCarg_Chr15:717305..719602
RNA-Seq ExpressionCarg02108
SyntenyCarg02108
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578436.1 hypothetical protein SDJN03_22884, partial [Cucurbita argyrosperma subsp. sororia]3.6e-9996.94Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQPRRTS AGADALLASNDVRQCSGQSRAEIVGAAAE+RRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTAT----AAAAAAAVVVPPHSTEARNFWQGH
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTAT    AAAAAAAVVVPPHSTEARNFWQGH
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTAT----AAAAAAAVVVPPHSTEARNFWQGH

KAG7015997.1 hypothetical protein SDJN02_21101 [Cucurbita argyrosperma subsp. argyrosperma]6.4e-128100Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGHSEKLHLSL
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGHSEKLHLSL
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGHSEKLHLSL

Query:  HSATARKLDYIVSLPARKLPEMEASLMFEKMLEPLSLAG
        HSATARKLDYIVSLPARKLPEMEASLMFEKMLEPLSLAG
Subjt:  HSATARKLDYIVSLPARKLPEMEASLMFEKMLEPLSLAG

XP_022938531.1 uncharacterized protein LOC111444740 [Cucurbita moschata]5.2e-9896.88Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECS+EMDLECGLAEIK+HLTKMERDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATY+PDSTEQRNDSNDATTAT   AAAAVVVPPHSTEARNFWQGH
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

XP_022993070.1 uncharacterized protein LOC111489196 [Cucurbita maxima]3.0e-9392.71Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQP RTSAAGADALLAS+DVRQCSGQSRAEIVGAAAEKRRESS SECS+EMDLECGL+EIKVHLTKM RDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT TY+PDSTEQRNDSND TTAT    AAAVVVPPHS EARNFWQGH
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

XP_023550950.1 uncharacterized protein LOC111808933 [Cucurbita pepo subsp. pepo]5.6e-8494.35Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLAS+DVR    +SRAEIVGAAAEKRR SSVSECS+EMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVV
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATY+PDSTEQRNDSNDATTATAAAAAA VV
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVV

TrEMBL top hitse value%identityAlignment
A0A5A7TJA4 E3 ubiquitin-protein ligase MARCH82.2e-7374.75Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEI---------VGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRIC
        MTT Q SHVVAMEV + +Q  RT          S++VR+CS  SRA+I         V AAAEKRR SSVSECS+EMDLECGLAEIKVHL K+ERDCRIC
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEI---------VGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRIC

Query:  HLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQG
        HLSLDASN ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT TY+ DSTEQRN+ N+ATTAT   A AA+V+PPHSTEARNFWQG
Subjt:  HLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQG

Query:  HS
        HS
Subjt:  HS

A0A6J1FEB0 uncharacterized protein LOC1114447402.5e-9896.88Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECS+EMDLECGLAEIK+HLTKMERDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATY+PDSTEQRNDSNDATTAT   AAAAVVVPPHSTEARNFWQGH
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

A0A6J1GZN3 uncharacterized protein LOC1114589381.2e-7679.27Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAA-EKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASN
        M+T +++HVVAME  + E+P R S AG  A  AS+DVR+CS QS AEIVGAAA EKRR SSVSECS+EMDLECGL EIKVHL KMERDCRICHLSLDA+N
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAA-EKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASN

Query:  QESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
         ESGIPIELGCSCKDDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVT+T + DSTEQ N+SND TTAT    AAAVVVPPHSTEARNFWQGH
Subjt:  QESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

A0A6J1JQX9 uncharacterized protein LOC1114875354.5e-7980.21Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        M+T QN+HVVAME  + E+P R S AG DA  AS+DVR+CS QS AEIVGAA EKRR SSVSECS+EMDLECGL EIKVHL KMERDCRICHLSLDA+N 
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
        ESGIPIELGCSCKDDLAAAHKHCAEAWFK+KGDITCEICGSIAHNVT+T + DSTEQ N+SND TTAT    AAAVVVPPHSTE RNFWQGH
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

A0A6J1JXH7 uncharacterized protein LOC1114891961.4e-9392.71Show/hide
Query:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ
        MTTTQNSHVVAMEVGEVEQP RTSAAGADALLAS+DVRQCSGQSRAEIVGAAAEKRRESS SECS+EMDLECGL+EIKVHLTKM RDCRICHLSLDASNQ
Subjt:  MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQ

Query:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
        ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT TY+PDSTEQRNDSND TTAT    AAAVVVPPHS EARNFWQGH
Subjt:  ESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34200.1 RING/FYVE/PHD zinc finger superfamily protein1.1e-1637.59Show/hide
Query:  SNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKM----ERDCRICHLSLDASNQESGIP-------IELGCSCKDDLAAAHKH
        + DV  CS    A +V         ++VS    E D+    A+ + H   +    ER CRICH   D S + SG         IE+GC CK++L  AH H
Subjt:  SNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKM----ERDCRICHLSLDASNQESGIP-------IELGCSCKDDLAAAHKH

Query:  CAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSND
        CAEAWFK++G+  CEICG  A NVT     D + +R+++ D
Subjt:  CAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSND

AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein2.7e-2053.68Show/hide
Query:  ERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQ--PDSTEQRNDSNDATTATAAAAAAAVV
        E+DCRICHL ++ S    G  IELGCSCKDDLA AH+ CAE WFKIKGD TCEIC S+A NV    +    + E+R   N   TA      A VV
Subjt:  ERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQ--PDSTEQRNDSNDATTATAAAAAAAVV

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein2.1e-2067.21Show/hide
Query:  ERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHN
        E+DCRICHL L++S  E G P+ LGCSCKDDL   HK CA+ WFKIKG+ TCEIC SIA N
Subjt:  ERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHN

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein3.7e-4152.05Show/hide
Query:  SAAGADALLASNDVRQCSG--QSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHK
        S++G D      + R+ SG  +   EIV    ++ R S+ S CS+E+DLE GL E  VHL++ ERDCRICH+SLDA+N ESG+PIELGCSCK DLAAAHK
Subjt:  SAAGADALLASNDVRQCSG--QSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHK

Query:  HCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH
        HCAE WFKIKG+  CE+CGSIA NV  + + +S E RN++N     T   +       P   E R+FWQGH
Subjt:  HCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGH

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein8.8e-1937.96Show/hide
Query:  RDCRICHLSLDASNQES-------------------------------GIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDS
        RDCRICHL L+ + +                                 G+P++LGCSCK DL  AH  CAE WFKIKG++TCEICG++A NV        
Subjt:  RDCRICHLSLDASNQES-------------------------------GIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDS

Query:  TEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQG
         EQ N  + A+T + AAA  ++      TE R  W G
Subjt:  TEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCACCCAAAACTCCCACGTTGTCGCAATGGAGGTAGGAGAAGTAGAACAGCCTCGCCGGACTTCAGCCGCCGGCGCTGACGCCTTACTAGCCTCCAATGATGT
GCGGCAGTGCTCGGGGCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGAGAAAAGAAGGGAATCCTCTGTGTCGGAGTGCTCTTTAGAGATGGATCTGGAATGTGGGT
TGGCTGAGATTAAGGTACATTTGACGAAAATGGAGAGGGATTGTCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCAGGAATCTGGAATCCCCATTGAGTTGGGTTGT
TCTTGCAAGGATGACTTGGCTGCTGCTCATAAGCACTGTGCTGAAGCTTGGTTCAAGATCAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTAC
TGCTACTTATCAACCTGATTCGACAGAGCAACGCAACGACTCAAACGACGCAACAACAGCAACCGCAGCAGCAGCAGCAGCAGCTGTGGTAGTGCCACCACACTCTACAG
AGGCTCGGAACTTCTGGCAGGGCCATAGTGAAAAGCTTCATCTATCTCTTCATTCTGCAACAGCTCGAAAGCTCGACTATATCGTGTCGTTACCAGCTCGAAAGCTCCCT
GAAATGGAAGCATCTTTGATGTTCGAAAAGATGCTGGAACCACTCAGCCTAGCTGGATAA
mRNA sequenceShow/hide mRNA sequence
TAATGATGTCTTCGAAATATTTCTTCGTCTTTTTCCCCTCTGCAACTCTGCGACTGTTATAGCCTGCACGTCGCCACTGACACCCAACAAAGCAGCTGAAATAGGGACAC
CCACCGCAGTTGCTTCTACTTCTCACGCCATTACTGATTATCGCACCAAAATCCACCCTAAACCGAATTTCTACTCTTTTGCTTGATGGGAGTCTCTTTTCTTTGTGGGT
ATTCACGGTTCTGGCCTCACAGAGCCATTACATGAGGTTTCTCTTTCTGGGTCTTTGCGATGACGACCACCCAAAACTCCCACGTTGTCGCAATGGAGGTAGGAGAAGTA
GAACAGCCTCGCCGGACTTCAGCCGCCGGCGCTGACGCCTTACTAGCCTCCAATGATGTGCGGCAGTGCTCGGGGCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGA
GAAAAGAAGGGAATCCTCTGTGTCGGAGTGCTCTTTAGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGACGAAAATGGAGAGGGATTGTCGGATTT
GCCATCTGAGTTTGGATGCTTCTAATCAGGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGACTTGGCTGCTGCTCATAAGCACTGTGCTGAAGCTTGG
TTCAAGATCAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGCTACTTATCAACCTGATTCGACAGAGCAACGCAACGACTCAAACGACGC
AACAACAGCAACCGCAGCAGCAGCAGCAGCAGCTGTGGTAGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGCCATAGTGAAAAGCTTCATCTATCTCTTC
ATTCTGCAACAGCTCGAAAGCTCGACTATATCGTGTCGTTACCAGCTCGAAAGCTCCCTGAAATGGAAGCATCTTTGATGTTCGAAAAGATGCTGGAACCACTCAGCCTA
GCTGGATAA
Protein sequenceShow/hide protein sequence
MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGC
SCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAVVVPPHSTEARNFWQGHSEKLHLSLHSATARKLDYIVSLPARKLP
EMEASLMFEKMLEPLSLAG