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Carg02208 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02208
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF3317)
Genome locationCarg_Chr15:1278321..1278775
RNA-Seq ExpressionCarg02208
SyntenyCarg02208
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024512 - Small subunit of serine palmitoyltransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578536.1 hypothetical protein SDJN03_22984, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2298.15Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
KAG7016096.1 hypothetical protein SDJN02_21200, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-32100Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRYCVYLCSTFSSSKSEN
        MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRYCVYLCSTFSSSKSEN
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRYCVYLCSTFSSSKSEN
XP_004141475.1 uncharacterized protein LOC101207494 [Cucumis sativus]3.3e-2192.59Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+ KRY
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
XP_022939543.1 uncharacterized protein LOC111445419 [Cucurbita moschata]3.0e-2298.15Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
XP_023550233.1 uncharacterized protein LOC111808468 [Cucurbita pepo subsp. pepo]6.7e-2296.3Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVV+LMWFMFYNGSRYVNDLYKR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
TrEMBL top hitse value%identityAlignment
A0A1S3C9L1 uncharacterized protein LOC1034985481.6e-2192.59Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRK+YLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+ KRY
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
A0A1U8JXD8 uncharacterized protein LOC1079101677.5e-1981.48Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNW+QRK+YLYNVTFGLYMLDWWER LFNTLV+VLMWF+FYN SRYV + YKR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
A0A6J1BY20 uncharacterized protein LOC1110067548.0e-2194.34Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKR
        MNWIQRK+YLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGS+YVNDL KR
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKR
A0A6J1FLX2 uncharacterized protein LOC1114454191.5e-2298.15Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
A0A6J1JYU1 uncharacterized protein LOC1114891121.5e-2298.15Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06515.1 Protein of unknown function (DUF3317)6.1e-2175.93Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNW+QRK+YLYNVTFGLYMLDWWER LFN+LVVVLMWF+ YNG+RY ++L++R+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
AT1G06515.2 Protein of unknown function (DUF3317)6.1e-2175.93Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNW+QRK+YLYNVTFGLYMLDWWER LFN+LVVVLMWF+ YNG+RY ++L++R+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
AT2G30942.1 Protein of unknown function (DUF3317)1.0e-2075.93Show/hide
Query:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY
        MNW+QRK+YLYNVTFGLYMLDWWER LFN+LV++LMWF+ YNGSRY ++L KR+
Subjt:  MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGGATACAAAGGAAGGTATACCTTTACAATGTCACTTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACGTTGGTGGTTGTGCTGATGTG
GTTCATGTTTTACAATGGATCGCGATACGTAAATGATTTGTACAAGAGGTATTGTGTTTACCTTTGCTCTACCTTTTCATCTTCAAAATCAGAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGGATACAAAGGAAGGTATACCTTTACAATGTCACTTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACGTTGGTGGTTGTGCTGATGTG
GTTCATGTTTTACAATGGATCGCGATACGTAAATGATTTGTACAAGAGGTATTGTGTTTACCTTTGCTCTACCTTTTCATCTTCAAAATCAGAAAATTAA
Protein sequenceShow/hide protein sequence
MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRYCVYLCSTFSSSKSEN