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Carg02216 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02216
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:1318258..1320561
RNA-Seq ExpressionCarg02216
SyntenyCarg02216
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016104.1 hypothetical protein SDJN02_21208, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-144100Show/hide
Query:  MKAKVQVASLFSSSVQEQKSPALRHLSFNRLRLHYFLLHSGGLNVCFRIRDCRQPRRYMFSRRFFPNLPKSRPQLSLLDKWKFGNRVGKWDFFSSSYIPR
        MKAKVQVASLFSSSVQEQKSPALRHLSFNRLRLHYFLLHSGGLNVCFRIRDCRQPRRYMFSRRFFPNLPKSRPQLSLLDKWKFGNRVGKWDFFSSSYIPR
Subjt:  MKAKVQVASLFSSSVQEQKSPALRHLSFNRLRLHYFLLHSGGLNVCFRIRDCRQPRRYMFSRRFFPNLPKSRPQLSLLDKWKFGNRVGKWDFFSSSYIPR

Query:  NLFSSAGTRETIFNIRSTCKALDRPQIFLCFHYIQYITLCSAGEVSTEVCGPSHVMNIPSCNVRQCFEGRLLKSLKPLTLTYLGYSNPSKRPWEVFTSIA
        NLFSSAGTRETIFNIRSTCKALDRPQIFLCFHYIQYITLCSAGEVSTEVCGPSHVMNIPSCNVRQCFEGRLLKSLKPLTLTYLGYSNPSKRPWEVFTSIA
Subjt:  NLFSSAGTRETIFNIRSTCKALDRPQIFLCFHYIQYITLCSAGEVSTEVCGPSHVMNIPSCNVRQCFEGRLLKSLKPLTLTYLGYSNPSKRPWEVFTSIA

Query:  HIQIFISTYLPQRWQPKALVNEFPVRTSLIGGKIKKMRRRNRTSTSLALINQT
        HIQIFISTYLPQRWQPKALVNEFPVRTSLIGGKIKKMRRRNRTSTSLALINQT
Subjt:  HIQIFISTYLPQRWQPKALVNEFPVRTSLIGGKIKKMRRRNRTSTSLALINQT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCAAAGGTACAAGTAGCATCCTTGTTTTCGAGTTCTGTTCAGGAGCAAAAGTCTCCAGCACTGAGACATCTCAGTTTTAATCGTTTGAGGCTCCACTACTTCCT
CCTTCACAGTGGAGGGCTCAATGTCTGCTTCAGGATCAGGGATTGCAGGCAACCAAGAAGGTATATGTTCTCCAGGAGGTTCTTCCCCAATTTGCCAAAAAGTAGGCCTC
AACTTTCGCTCCTTGACAAATGGAAATTTGGGAACAGAGTAGGCAAATGGGATTTCTTCAGCTCGAGCTACATACCGAGAAATCTCTTTAGCAGTGCCGGAACTCGCGAG
ACAATATTCAATATCCGAAGCACCTGCAAAGCCTTGGACAGACCCCAAATCTTCCTGTGCTTTCATTATATCCAATACATTACACTCTGTTCTGCCGGCGAAGTTAGCAC
AGAAGTTTGCGGCCCTTCCCATGTTATGAACATACCGAGCTGCAACGTCCGCCAGTGTTTCGAGGGCAGACTGTTGAAAAGTTTGAAACCCCTCACTCTCACATATTTGG
GATACAGCAATCCTAGCAAGCGCCCGTGGGAAGTCTTCACCTCCATCGCTCATATTCAAATATTCATATCAACTTATCTGCCGCAAAGATGGCAACCAAAAGCACTCGTG
AATGAATTCCCCGTTCGCACTTCGCTCATCGGCGGAAAGATCAAGAAAATGAGACGAAGAAATCGCACAAGTACTTCGCTGGCGCTCATAAATCAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCAAAGGTACAAGTAGCATCCTTGTTTTCGAGTTCTGTTCAGGAGCAAAAGTCTCCAGCACTGAGACATCTCAGTTTTAATCGTTTGAGGCTCCACTACTTCCT
CCTTCACAGTGGAGGGCTCAATGTCTGCTTCAGGATCAGGGATTGCAGGCAACCAAGAAGGTATATGTTCTCCAGGAGGTTCTTCCCCAATTTGCCAAAAAGTAGGCCTC
AACTTTCGCTCCTTGACAAATGGAAATTTGGGAACAGAGTAGGCAAATGGGATTTCTTCAGCTCGAGCTACATACCGAGAAATCTCTTTAGCAGTGCCGGAACTCGCGAG
ACAATATTCAATATCCGAAGCACCTGCAAAGCCTTGGACAGACCCCAAATCTTCCTGTGCTTTCATTATATCCAATACATTACACTCTGTTCTGCCGGCGAAGTTAGCAC
AGAAGTTTGCGGCCCTTCCCATGTTATGAACATACCGAGCTGCAACGTCCGCCAGTGTTTCGAGGGCAGACTGTTGAAAAGTTTGAAACCCCTCACTCTCACATATTTGG
GATACAGCAATCCTAGCAAGCGCCCGTGGGAAGTCTTCACCTCCATCGCTCATATTCAAATATTCATATCAACTTATCTGCCGCAAAGATGGCAACCAAAAGCACTCGTG
AATGAATTCCCCGTTCGCACTTCGCTCATCGGCGGAAAGATCAAGAAAATGAGACGAAGAAATCGCACAAGTACTTCGCTGGCGCTCATAAATCAGACTTAA
Protein sequenceShow/hide protein sequence
MKAKVQVASLFSSSVQEQKSPALRHLSFNRLRLHYFLLHSGGLNVCFRIRDCRQPRRYMFSRRFFPNLPKSRPQLSLLDKWKFGNRVGKWDFFSSSYIPRNLFSSAGTRE
TIFNIRSTCKALDRPQIFLCFHYIQYITLCSAGEVSTEVCGPSHVMNIPSCNVRQCFEGRLLKSLKPLTLTYLGYSNPSKRPWEVFTSIAHIQIFISTYLPQRWQPKALV
NEFPVRTSLIGGKIKKMRRRNRTSTSLALINQT