; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02252 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02252
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L34
Genome locationCarg_Chr15:1473282..1474330
RNA-Seq ExpressionCarg02252
SyntenyCarg02252
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939767.1 60S ribosomal protein L34 [Cucurbita moschata]1.1e-56100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKSSK
        KIVKKVLKIQKAKEKLAAKSSK
Subjt:  KIVKKVLKIQKAKEKLAAKSSK

XP_022993685.1 60S ribosomal protein L34 [Cucurbita maxima]9.6e-5699.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHR+VKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_023550590.1 60S ribosomal protein L34 [Cucurbita pepo subsp. pepo]1.5e-5699.18Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRT+NRAYGGVLSGSAVRERIMRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKSSK
        KIVKKVLKIQKAKEKLAAKSSK
Subjt:  KIVKKVLKIQKAKEKLAAKSSK

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]2.8e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]2.1e-5599.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

TrEMBL top hitse value%identityAlignment
A0A1S3BV34 60S ribosomal protein L343.0e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A5A7UWQ0 60S ribosomal protein L343.0e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6J1FHR3 60S ribosomal protein L345.5e-57100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKSSK
        KIVKKVLKIQKAKEKLAAKSSK
Subjt:  KIVKKVLKIQKAKEKLAAKSSK

A0A6J1JZ78 60S ribosomal protein L344.7e-5699.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHR+VKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

A0A6P6V549 60S ribosomal protein L341.4e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L345.0e-5592.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQK KEK AAK+
Subjt:  KIVKKVLKIQKAKEKLAAKS

P41098 60S ribosomal protein L345.3e-5796.67Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLKIQKAKEKLAAKS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q42351 60S ribosomal protein L34-11.1e-5490.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

Q9FE65 60S ribosomal protein L34-25.5e-5491.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

Q9LJW6 60S ribosomal protein L34-33.6e-5390.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein7.9e-5690.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLAAKS

AT1G26880.2 Ribosomal protein L34e superfamily protein1.2e-4391.3Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIM
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIM

AT1G69620.1 ribosomal protein L343.9e-5591.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLAAK

AT3G28900.1 Ribosomal protein L34e superfamily protein2.5e-5490.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLAAKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLAAKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTCAAGACTCCGGGTGGAAAGTTGATCTATCAAACCACCAAGAA
GAGGGCCAGCGGTCCCAAATGTCCTGTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGAAGAACTG
TAAACCGGGCATATGGTGGCGTGTTGTCAGGAAGTGCTGTTAGAGAGAGGATCATGCGGGCTTTTCTTGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAA
AAGGCAAAGGAAAAGCTAGCTGCCAAGAGTTCAAAATGA
mRNA sequenceShow/hide mRNA sequence
CTCGATTTTTCTTAGAGACGCATAGATACCCGAAATCAAGGTTAATTGAAGATGGTTCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCA
CCGCGTTGTCAAGACTCCGGGTGGAAAGTTGATCTATCAAACCACCAAGAAGAGGGCCAGCGGTCCCAAATGTCCTGTTACCGGGAAGAGAATCCAAGGGATTCCGCACT
TGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGAAGAACTGTAAACCGGGCATATGGTGGCGTGTTGTCAGGAAGTGCTGTTAGAGAGAGGATCATGCGG
GCTTTTCTTGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAAAAGGCAAAGGAAAAGCTAGCTGCCAAGAGTTCAAAATGAGTATTTTGGCTTGAATTTGC
GAATTTTAGTGTTGATAGTGGTTAGATGTTTCTGGGTTCTTCCTTAAATGGGTCATTGTTGACAAATCAATCCCCCAAGTGTCCTGTTTTGTGATATCATGAATGCGGAT
TTCAGGAAACAATGTTCTTGTGATGTTCTTCAGTATGAACTGGGAATTGACGTGATATTAACAACGTTGAATTACTACAAGAAAGCCACTAATTT
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIMRAFLVEEQKIVKKVLKIQ
KAKEKLAAKSSK