CuGenDBv2

Gene ID	Carg02260
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Translation factor GUF1 homolog, mitochondrial
Genome location	Carg_Chr15:1515250..1516881
RNA-Seq Expression	Carg02260
Synteny	Carg02260
Gene Ontology terms	GO:0045727 - positive regulation of translation (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005759 - mitochondrial matrix (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0097177 - mitochondrial ribosome binding (molecular function)
InterPro domains	IPR006297 - Elongation factor 4 IPR013842 - GTP-binding protein LepA, C-terminal IPR038363 - LepA, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7016148.1 Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-30

100

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_022964900.1 translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita moschata]

3.3e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_022991182.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima]

3.3e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_023553579.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]

3.3e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

XP_023553581.1 translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]

3.3e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

TrEMBL top hits

e value

%identity

Alignment

A0A1U7YWP0 Translation factor GUF1 homolog, mitochondrial

3.6e-27

91.78

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSK+IARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1HK65 Translation factor GUF1 homolog, mitochondrial

1.6e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1HM47 Translation factor GUF1 homolog, mitochondrial

1.6e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1JL24 Translation factor GUF1 homolog, mitochondrial

1.6e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

A0A6J1JU42 Translation factor GUF1 homolog, mitochondrial

1.6e-27

94.52

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSKIIARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HEILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

SwissProt top hits

e value

%identity

Alignment

B8B2R1 Translation factor GUF1 homolog, mitochondrial

6.2e-29

86.3

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAA+GSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

B9RUN8 Translation factor GUF1 homolog, mitochondrial

1.3e-29

90.41

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSK++ARETISA RKNVLAKCYGGDVTRKRKLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

C5Z3W1 Translation factor GUF1 homolog, mitochondrial

4.8e-29

87.67

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAAIGSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Q5VQ69 Translation factor GUF1 homolog, mitochondrial

6.2e-29

86.3

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFEITIQAA+GSK+IARET+SA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIPQEA HE+LKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Q9FLE4 Translation factor GUF1 homolog, mitochondrial

1.3e-26

83.56

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFE+ IQAAIGSKIIAR+TISA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIP EA  +ILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Arabidopsis top hits

e value

%identity

Alignment

AT5G08650.1 Small GTP-binding protein

1.1e-20

63.89

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKV
        MF++ IQA IGSK+IA E +SA RK+VLAKCYGGD++RK+KLL+KQ  GKK MK +G VD+PQEA   +LK+
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKV

AT5G39900.1 Small GTP-binding protein

9.2e-28

83.56

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Query:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS
        MFE+ IQAAIGSKIIAR+TISA RKNVLAKCYGGD+TRK+KLLEKQKEGKK MK VGSVDIP EA  +ILKVS
Subjt:  MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Sequences

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CDS sequence

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ATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTAC
TCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCAT
AG

mRNA sequence

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CTGTAAATCCTTCATTTTCTTTTGCTACTTTGGTGTCTGCAATGGTTTGTCTGTTTCGTTTGCTACCTCTTAGTGACATTTGTCCTTGTAGGTTTTAAGCCTGTAAAGCA
CAGGGTTTTCTCTGGTCTATAACCAGCTGACGGGTCAGATTTTGATGCACTCAACCATGCAATAGAGAGACTTACATGTAATGATGCCAGCGTCTCTGTAACAGCATTAG
GGCTTGATTTTAGTCAAAGGCATTTATGAATTATCGCGTACCTTTAAGGGAATTGTTGTTGACTTTTACAATGAATTAAAGAGTATAACGTCGGGATATGCATCATTCGA
TTACGAGGATTCAGAGTATCAACAAGCAGATTTGGTGAAACTAGATAGCCTATTGAATGGGCAGCCAGTTTTCATAATTTGAAGGCGCAAAGGGTCGGACGCGAATTGGT
GGAAAAACTGAAGAAGTTCATTGACAGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGATCTCGGCCACGAGGAAAAATG
TTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAG
GAAGCAATTCATGAAATTCTGAAGGTTTCATAG

Protein sequence

Show/hide protein sequence

MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS

Carg02260 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome