; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02293 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02293
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin-protein ligase ATL4-like
Genome locationCarg_Chr15:1687207..1687623
RNA-Seq ExpressionCarg02293
SyntenyCarg02293
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578641.1 putative RING-H2 finger protein ATL50, partial [Cucurbita argyrosperma subsp. sororia]1.9e-71100Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS
        HSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS
Subjt:  HSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS

ONI19519.1 hypothetical protein PRUPE_3G282900 [Prunus persica]4.5e-3356.83Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRAL-RGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPIC
        M +  S+IL+ +GI  L+L++VWIVGRA  RGGF N +     S+      T  M +DDLEKLP F Y+A  +  GSPVDCAVCL  F+MGEKCRLLP+C
Subjt:  MELIVSLILILLGIAILVLINVWIVGRAL-RGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPIC

Query:  KHSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS
        KHSFHAQCVD WLL TP CPICR+ T E  K   V + S
Subjt:  KHSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS

XP_007216220.2 RING-H2 finger protein ATL39 [Prunus persica]4.5e-3356.83Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRAL-RGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPIC
        M +  S+IL+ +GI  L+L++VWIVGRA  RGGF N +     S+      T  M +DDLEKLP F Y+A  +  GSPVDCAVCL  F+MGEKCRLLP+C
Subjt:  MELIVSLILILLGIAILVLINVWIVGRAL-RGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPIC

Query:  KHSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS
        KHSFHAQCVD WLL TP CPICR+ T E  K   V + S
Subjt:  KHSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS

XP_022134384.1 E3 ubiquitin-protein ligase ATL4-like [Momordica charantia]8.1e-4371.76Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        M ++VS+ LIL+ I ILVLI+V IV RALR GFENE T      +NNG+A+ C  RDDLEKLPCF++MAMEE  GSPVDCAVCLGKF+MG+KCR+LP+CK
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTSTLESLKG
        HSFHA+CVDEWLL+TP CPICRT+TLESLKG
Subjt:  HSFHAQCVDEWLLLTPACPICRTSTLESLKG

XP_023551528.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.9e-6896.38Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        MELIVSLILILLGIAILVLINVWIVGRALRGGFENE TTVGRS+NNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS
        HSFHAQCVDEWLLLTPACPICRTSTL SLKG D DERS
Subjt:  HSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS

TrEMBL top hitse value%identityAlignment
A0A438EFR3 Putative RING-H2 finger protein ATL496.3e-3360.48Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        M +++SLIL+ LGI +LV+I+V IVGRA RGGF N     GR        +  M  DDL+KLPCF + A E+   SPVDCAVCL  F+MG+KCRLLP+C 
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTS
        HSFHAQCVD WLL TP CPICRTS
Subjt:  HSFHAQCVDEWLLLTPACPICRTS

A0A438JIH1 Putative RING-H2 finger protein ATL496.3e-3360.48Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        M +++SLIL+ LGI +LV+I+V IVGRA RGGF N     GR        +  M  DDL+KLPCF + A E+   SPVDCAVCL  F+MG+KCRLLP+C 
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTS
        HSFHAQCVD WLL TP CPICRTS
Subjt:  HSFHAQCVDEWLLLTPACPICRTS

A0A5N6QVF9 RING-type domain-containing protein2.8e-3358.96Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        M +I+S+ L+  GI +L+LI+V IVGRA R GF N T             +  M RDDL+KLPC+ Y A EE   SPVDCAVCL  F+MG+KCRLLP CK
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTSTLESLKGADV
        HSFHAQCVD WLL TP CPICRTS  ES KG  V
Subjt:  HSFHAQCVDEWLLLTPACPICRTSTLESLKGADV

A0A6J1BYM3 E3 ubiquitin-protein ligase ATL4-like3.9e-4371.76Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK
        M ++VS+ LIL+ I ILVLI+V IV RALR GFENE T      +NNG+A+ C  RDDLEKLPCF++MAMEE  GSPVDCAVCLGKF+MG+KCR+LP+CK
Subjt:  MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICK

Query:  HSFHAQCVDEWLLLTPACPICRTSTLESLKG
        HSFHA+CVDEWLL+TP CPICRT+TLESLKG
Subjt:  HSFHAQCVDEWLLLTPACPICRTSTLESLKG

M5WUQ4 RING-type domain-containing protein2.2e-3356.83Show/hide
Query:  MELIVSLILILLGIAILVLINVWIVGRAL-RGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPIC
        M +  S+IL+ +GI  L+L++VWIVGRA  RGGF N +     S+      T  M +DDLEKLP F Y+A  +  GSPVDCAVCL  F+MGEKCRLLP+C
Subjt:  MELIVSLILILLGIAILVLINVWIVGRAL-RGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPIC

Query:  KHSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS
        KHSFHAQCVD WLL TP CPICR+ T E  K   V + S
Subjt:  KHSFHAQCVDEWLLLTPACPICRTSTLESLKGADVDERS

SwissProt top hitse value%identityAlignment
Q5EAE9 RING-H2 finger protein ATL432.6e-1240.22Show/hide
Query:  GGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICR
        GG+ N    VG   N+       + R  +E LP F++ A+       ++CAVCL +F+  E  RLLP CKH+FH +CVD WL     CP+CR
Subjt:  GGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICR

Q7X843 RING-H2 finger protein ATL486.3e-1446.97Show/hide
Query:  LEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTS
        ++ LP F Y  +   +  P DCAVCL +F   +K RLLP+C H+FH  C+D WLL    CP+CR S
Subjt:  LEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTS

Q8W571 RING-H2 finger protein ATL324.5e-1233.88Show/hide
Query:  LINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEE-PMGS-PVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTP
        L++V+I     R   ++ T       N+     G +    +E  P F Y +++E  +GS  ++CA+CL + +  E  RLLPIC H FH  C+D WL    
Subjt:  LINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEE-PMGS-PVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTP

Query:  ACPICRTS-TLESLKGADVDE
         CP+CR++ T +S K  D D+
Subjt:  ACPICRTS-TLESLKGADVDE

Q940Q4 RING-H2 finger protein ATL137.7e-1234.38Show/hide
Query:  LIVSLILILLGIA-ILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKH
        +I+S+I  + G+  +LV   +    R     F+N T   G+           + +  ++ LP F Y ++      P DCAVCL +F+  +K RLLP C H
Subjt:  LIVSLILILLGIA-ILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKH

Query:  SFHAQCVDEWLLLTPACPICRTSTLESL
        +FH  C+D WLL    CP+CR+S L  L
Subjt:  SFHAQCVDEWLLLTPACPICRTSTLESL

Q9SG96 RING-H2 finger protein ATL725.9e-1237.5Show/hide
Query:  ENETTTVGRSNNNNGE---ATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTSTL
        +++ +    +N N G    ATG +++  L+++P   Y +    M    +C +CLG F+ GEK R+LP C H FH +C+D WLL   +CP CR S L
Subjt:  ENETTTVGRSNNNNGE---ATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTSTL

Arabidopsis top hitse value%identityAlignment
AT3G10910.1 RING/U-box superfamily protein4.2e-1337.5Show/hide
Query:  ENETTTVGRSNNNNGE---ATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTSTL
        +++ +    +N N G    ATG +++  L+++P   Y +    M    +C +CLG F+ GEK R+LP C H FH +C+D WLL   +CP CR S L
Subjt:  ENETTTVGRSNNNNGE---ATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTSTL

AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein4.5e-1546.97Show/hide
Query:  LEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTS
        ++ LP F Y  +   +  P DCAVCL +F   +K RLLP+C H+FH  C+D WLL    CP+CR S
Subjt:  LEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICRTS

AT4G30400.1 RING/U-box superfamily protein5.5e-1334.38Show/hide
Query:  LIVSLILILLGIA-ILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKH
        +I+S+I  + G+  +LV   +    R     F+N T   G+           + +  ++ LP F Y ++      P DCAVCL +F+  +K RLLP C H
Subjt:  LIVSLILILLGIA-ILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKH

Query:  SFHAQCVDEWLLLTPACPICRTSTLESL
        +FH  C+D WLL    CP+CR+S L  L
Subjt:  SFHAQCVDEWLLLTPACPICRTSTLESL

AT4G40070.1 RING/U-box superfamily protein3.2e-1333.88Show/hide
Query:  LINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEE-PMGS-PVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTP
        L++V+I     R   ++ T       N+     G +    +E  P F Y +++E  +GS  ++CA+CL + +  E  RLLPIC H FH  C+D WL    
Subjt:  LINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEE-PMGS-PVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTP

Query:  ACPICRTS-TLESLKGADVDE
         CP+CR++ T +S K  D D+
Subjt:  ACPICRTS-TLESLKGADVDE

AT5G05810.1 RING/U-box superfamily protein1.9e-1340.22Show/hide
Query:  GGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICR
        GG+ N    VG   N+       + R  +E LP F++ A+       ++CAVCL +F+  E  RLLP CKH+FH +CVD WL     CP+CR
Subjt:  GGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDEWLLLTPACPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTATCGTATCCCTGATACTCATACTTCTGGGAATTGCCATTTTGGTGTTGATTAACGTGTGGATAGTTGGGAGAGCATTGAGGGGAGGGTTTGAAAATGAAAC
GACGACTGTGGGAAGAAGCAACAACAATAACGGGGAAGCAACAGGCTGCATGCGCAGAGATGACTTGGAGAAGCTTCCTTGCTTTCAATATATGGCTATGGAGGAACCAA
TGGGCAGCCCTGTGGATTGTGCAGTTTGCTTGGGGAAATTCCAGATGGGCGAGAAGTGCAGGCTGTTGCCTATTTGCAAGCACAGCTTCCACGCTCAGTGCGTTGATGAG
TGGCTTTTGCTGACTCCTGCTTGCCCCATTTGTCGAACAAGCACTCTTGAGTCTCTAAAAGGAGCTGATGTAGATGAAAGATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTATCGTATCCCTGATACTCATACTTCTGGGAATTGCCATTTTGGTGTTGATTAACGTGTGGATAGTTGGGAGAGCATTGAGGGGAGGGTTTGAAAATGAAAC
GACGACTGTGGGAAGAAGCAACAACAATAACGGGGAAGCAACAGGCTGCATGCGCAGAGATGACTTGGAGAAGCTTCCTTGCTTTCAATATATGGCTATGGAGGAACCAA
TGGGCAGCCCTGTGGATTGTGCAGTTTGCTTGGGGAAATTCCAGATGGGCGAGAAGTGCAGGCTGTTGCCTATTTGCAAGCACAGCTTCCACGCTCAGTGCGTTGATGAG
TGGCTTTTGCTGACTCCTGCTTGCCCCATTTGTCGAACAAGCACTCTTGAGTCTCTAAAAGGAGCTGATGTAGATGAAAGATCATGA
Protein sequenceShow/hide protein sequence
MELIVSLILILLGIAILVLINVWIVGRALRGGFENETTTVGRSNNNNGEATGCMRRDDLEKLPCFQYMAMEEPMGSPVDCAVCLGKFQMGEKCRLLPICKHSFHAQCVDE
WLLLTPACPICRTSTLESLKGADVDERS