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Carg02295 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02295
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionconserved peptide upstream open reading frame 33
Genome locationCarg_Chr15:1691025..1691429
RNA-Seq ExpressionCarg02295
SyntenyCarg02295
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016183.1 hypothetical protein SDJN02_21287, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-34100Show/hide
Query:  MALNSKGNMREIQSAGDLISRSPEFLFTIKLVFETDEALGNNRAGRVMGFCISPLGTPARLLWSTSFFRHKLMIF
        MALNSKGNMREIQSAGDLISRSPEFLFTIKLVFETDEALGNNRAGRVMGFCISPLGTPARLLWSTSFFRHKLMIF
Subjt:  MALNSKGNMREIQSAGDLISRSPEFLFTIKLVFETDEALGNNRAGRVMGFCISPLGTPARLLWSTSFFRHKLMIF
KAG7033126.1 hypothetical protein SDJN02_07179, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-1686Show/hide
Query:  LFTIKLVFETDEALGNNRAGRVMGFCISPLGTPARLLWSTSFFRHKLMIF
        L T + VFETDE LGNNRAG VMGFC+SPLGTPARLLWSTSFFRHKLMIF
Subjt:  LFTIKLVFETDEALGNNRAGRVMGFCISPLGTPARLLWSTSFFRHKLMIF
PHU27564.1 hypothetical protein BC332_05896 [Capsicum chinense]3.6e-0589.29Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF
PIN00164.1 hypothetical protein CDL12_27332 [Handroanthus impetiginosus]2.8e-0586.21Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
XP_030447493.1 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Syzygium oleosum]3.3e-0675Show/hide
Query:  EALGNNRAGR-VMGFCISPLGTPARLLWSTSFFRHKLMIF
        E LG    G  VMGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  EALGNNRAGR-VMGFCISPLGTPARLLWSTSFFRHKLMIF
TrEMBL top hitse value%identityAlignment
A0A2G3D9B2 Uncharacterized protein1.8e-0589.29Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF
A0A2G9G4C3 Uncharacterized protein1.4e-0586.21Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
A0A2G9GBV9 Uncharacterized protein1.5e-0479.31Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL TPARLLW +SFFRHKLM+F
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
A2NW02 A.thaliana homeobox gene Athb-1 mRNA3.9e-0582.76Show/hide
Query:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
        +MGFCI PL +PARLLWSTSFFRHK+MIF
Subjt:  VMGFCISPLGTPARLLWSTSFFRHKLMIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01472.1 conserved peptide upstream open reading frame 339.9e-0985.71Show/hide
Query:  MGFCISPLGTPARLLWSTSFFRHKLMIF
        MGFCI PL +PARLLWSTSFFRHK+MIF
Subjt:  MGFCISPLGTPARLLWSTSFFRHKLMIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTAAATAGCAAGGGTAATATGCGTGAAATCCAGTCCGCCGGGGATCTTATTTCCCGGTCGCCGGAGTTTCTGTTTACGATAAAGCTTGTTTTCGAGACTGACGA
AGCGCTGGGTAATAACAGAGCTGGTCGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTGTGGAGCACCAGCTTCTTCCGCCACAAGCTCATGA
TTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTAAATAGCAAGGGTAATATGCGTGAAATCCAGTCCGCCGGGGATCTTATTTCCCGGTCGCCGGAGTTTCTGTTTACGATAAAGCTTGTTTTCGAGACTGACGA
AGCGCTGGGTAATAACAGAGCTGGTCGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTGTGGAGCACCAGCTTCTTCCGCCACAAGCTCATGA
TTTTCTAA
Protein sequenceShow/hide protein sequence
MALNSKGNMREIQSAGDLISRSPEFLFTIKLVFETDEALGNNRAGRVMGFCISPLGTPARLLWSTSFFRHKLMIF