CuGenDBv2

Gene ID	Carg02372
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L35
Genome location	Carg_Chr15:2036993..2038881
RNA-Seq Expression	Carg02372
Synteny	Carg02372
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001854 - Ribosomal protein L29/L35 IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601021.1 Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-53

100

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-53

100

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]

6.5e-52

97.56

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]

4.5e-53

100

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_023549703.1 60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]

2.9e-52

98.37

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRR+LTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQT2 Uncharacterized protein

7.0e-52

97.56

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1BZV3 60S ribosomal protein L35

3.2e-52

97.56

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1E5L3 60S ribosomal protein L35-like

3.2e-52

98.37

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SL TER+KKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L35

2.2e-53

100

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L35

2.2e-53

100

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

1.7e-50

91.06

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-4

6.3e-50

90.24

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-3

1.8e-49

89.43

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L35

2.6e-51

91.87

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-1

3.7e-50

90.24

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Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

1.2e-51

91.06

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein

2.6e-51

90.24

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein

1.3e-50

89.43

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein

1.3e-50

89.43

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein

4.5e-51

90.24

Show/hide

Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTTTTGACACAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGAGTCGCCAAA
GTCACCGGCGGTGCCCCGAACAAGTTATCCAAAATCAAGGTAGTTAGATTGTCGATTGCTCAAGTCCTGACAGTGATTTCCCAGAAGCAGAAGGCTGCATTGAGG
GAAGCTTACAAGAAGAAGAAGCTCCTGCCTCTGGATCTGCGCCCAAAGAAGACGAGGGCCATTCGTAGAAGGCTCACCAAGCATCAAGCGTCGTTGAAAACGGAG
AGAGAGAAGAAGAAGGAGATGTACTATCCATTGAGGAAATATGCTATTAAGGTGTAG

mRNA sequence

Show/hide mRNA sequence

AGTCTTCTAAGTAGCAGCTCTTCCACCAGGTTCCATTATCTTCTCTTCTAGGGTTTTGCCGAGGCGGCGTGGAGTAGAAGAGCACACAAGAAGAAATGGCGAGGA
TCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTTTTGACACAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGAGTCGCCAAAGTCACCGGCG
GTGCCCCGAACAAGTTATCCAAAATCAAGGTAGTTAGATTGTCGATTGCTCAAGTCCTGACAGTGATTTCCCAGAAGCAGAAGGCTGCATTGAGGGAAGCTTACA
AGAAGAAGAAGCTCCTGCCTCTGGATCTGCGCCCAAAGAAGACGAGGGCCATTCGTAGAAGGCTCACCAAGCATCAAGCGTCGTTGAAAACGGAGAGAGAGAAGA
AGAAGGAGATGTACTATCCATTGAGGAAATATGCTATTAAGGTGTAGTAATATTCGGTAGTCACTTTATTATGCAACGGCAGACCAATTTTGTTGACAAGTTTTG
TCTCGTATTCTTGATAAGCTTATGTCTGATTCTCTTGGGGCTTTCCCCTCCTAAACCAAGTTGTTCTATTTTCATTGACAATTATATATTTCAGAGTTTAGCGTT
TTGTTCTTCATGTTTTTTGAACTTATTTTTTAGTGCATTCCACTTTAAGCTTCTCCAAATTTCCATGACATTATTTGCACTCAACCCACCTATGCCAAGTTGATC
TTTTCTATTGTGTTCTCTGAGATGATGATTTAAATGAATGGAGAAAAAATGAAGGCTGTCGTATTATTGACCATATTAACTTCCGAAAAGGTTGGAAGTGATGGT
TGAGTTTCGTTTGTGTTTAATAGTATTTTGATAGGTATATGAATTTTTATATTATTTTATGTGATATAAATCCC

Protein sequence

Show/hide protein sequence

MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTE
REKKKEMYYPLRKYAIKV

Carg02372 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome