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Carg02404 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02404
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontyrosine-specific transport protein 1-like isoform X3
Genome locationCarg_Chr15:2198510..2200337
RNA-Seq ExpressionCarg02404
SyntenyCarg02404
Gene Ontology termsGO:0003333 - amino acid transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018227 - Amino acid/polyamine transporter 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578760.1 hypothetical protein SDJN03_23208, partial [Cucurbita argyrosperma subsp. sororia]3.8e-42100Show/hide
Query:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS
        MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS
Subjt:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS
KAG7016288.1 hypothetical protein SDJN02_21394 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-44100Show/hide
Query:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
        MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
Subjt:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
XP_022939144.1 uncharacterized protein LOC111445140 [Cucurbita moschata]4.7e-1694.23Show/hide
Query:  ERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
        +RRGETGI AISVRTMAQETLGDFGTLAT+AYVFLGYTSMVAYVSKSGEILL
Subjt:  ERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
XP_023550384.1 uncharacterized protein LOC111808551 isoform X1 [Cucurbita pepo subsp. pepo]4.7e-4092Show/hide
Query:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
        MPA+SF +AIAV MFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEA+SVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS   LL
Subjt:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
XP_023550385.1 uncharacterized protein LOC111808551 isoform X2 [Cucurbita pepo subsp. pepo]6.1e-4094.74Show/hide
Query:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS
        MPA+SF +AIAV MFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEA+SVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS
Subjt:  MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKS
TrEMBL top hitse value%identityAlignment
A0A0A0KHF6 Uncharacterized protein1.5e-1579.1Show/hide
Query:  VFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
        V L R KK+E   EE  GETG+E ISVRTMAQETLGDF GTLATV YVFLGYTSMVAY+SKSGEILL
Subjt:  VFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
A0A1S4E1A5 tyrosine-specific transport protein 1-like isoform X21.1e-1576.47Show/hide
Query:  LVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
        +V   R KK++ GEE   GETG+E ISVRTMAQETLGDF GTLATV YVFLGYTSMVAY+SKSGEILL
Subjt:  LVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
A0A1S4E1A6 tyrosine-specific transport protein 1-like isoform X31.1e-1576.47Show/hide
Query:  LVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
        +V   R KK++ GEE   GETG+E ISVRTMAQETLGDF GTLATV YVFLGYTSMVAY+SKSGEILL
Subjt:  LVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
A0A1S4E201 tyrosine-specific transport protein 1-like isoform X11.1e-1576.47Show/hide
Query:  LVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
        +V   R KK++ GEE   GETG+E ISVRTMAQETLGDF GTLATV YVFLGYTSMVAY+SKSGEILL
Subjt:  LVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDF-GTLATVAYVFLGYTSMVAYVSKSGEILL
A0A6J1FG92 uncharacterized protein LOC1114451402.3e-1694.23Show/hide
Query:  ERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
        +RRGETGI AISVRTMAQETLGDFGTLAT+AYVFLGYTSMVAYVSKSGEILL
Subjt:  ERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCAAGTTCTTTCACGGTCGCCATTGCCGTCCCCATGTTCAAGGACCTCTCTACAAAATTGCCGAATGGGCGAAAGATCAAAGAGATACAACCGTTGGTTTTTCT
GCTACGAGCAAAAAAGCGGGAAAACGGAGAAGAAGAACGAAGAGGAGAGACGGGGATAGAGGCGATTTCAGTCAGAACTATGGCGCAGGAGACTCTGGGGGACTTTGGAA
CCCTAGCCACTGTTGCCTATGTTTTCTTGGGCTACACTTCTATGGTGGCCTATGTTTCCAAGTCGGGTGAGATCCTTCTCTAA
mRNA sequenceShow/hide mRNA sequence
AAACTTTTAGAGTCACCTTCTTCGCCTCTGCATTTGGCTTCCATGAATTTACACTCCCGTCATCATCTCTTCCACTTTATTTTGCCCTAAAACCCACGGTCGATGCCTGC
AAGTTCTTTCACGGTCGCCATTGCCGTCCCCATGTTCAAGGACCTCTCTACAAAATTGCCGAATGGGCGAAAGATCAAAGAGATACAACCGTTGGTTTTTCTGCTACGAG
CAAAAAAGCGGGAAAACGGAGAAGAAGAACGAAGAGGAGAGACGGGGATAGAGGCGATTTCAGTCAGAACTATGGCGCAGGAGACTCTGGGGGACTTTGGAACCCTAGCC
ACTGTTGCCTATGTTTTCTTGGGCTACACTTCTATGGTGGCCTATGTTTCCAAGTCGGGTGAGATCCTTCTCTAATCGTTCAATCTTCCATCTCCACTTACAGGCTACCT
TTTCTCTTTGGTTTTTTCTCTGCTAGCCATAGATCAAATCAACCAATGGCTTACTGCTTGCATGAAAGATCGAGCCTGAGCGGAACTTGCTGCGAGCTGCTTGGTTTGGA
AACAATCTTGAGATACACATTATGACATGTATGCAGTATCCGTCTCATAAATTGCAAACCCAAGGACCGAAATTTGCAGTGAGTTGTCATGGGGAAGGCCATAGAATGCC
TCAGGCCAAGGATCAGAAAAAAAGGAGAAAGAAGAGCTGAGAAAAGACAAGATAGTGGAGATGGATGGCATTTTTTTTCCAAAGTGCTGCAAGTTAATGCAGTTGTTTCA
CTTATTCTTTATACTTCTCTGGAGTGGGCGAGTTTATATAGAGCTGAAGGAGATTGAAGCTCACTGAAATATCTAGTTATAAACCTTAATGACGAGTTACTTTCACTAAA
CCTCTGGGTCCTATGCCCTGACCCAGAAAGCAGGAGGAATAATATTTTGTGTTTGGAAAGAATTTGATATAATGCAATTATGCAGGCGAGTCTTAGAATTCCA
Protein sequenceShow/hide protein sequence
MPASSFTVAIAVPMFKDLSTKLPNGRKIKEIQPLVFLLRAKKRENGEEERRGETGIEAISVRTMAQETLGDFGTLATVAYVFLGYTSMVAYVSKSGEILL