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Carg02431 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02431
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:2352815..2354918
RNA-Seq ExpressionCarg02431
SyntenyCarg02431
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578783.1 hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sororia]3.3e-70100Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

XP_022938932.1 uncharacterized protein LOC111444995 [Cucurbita moschata]2.2e-6999.24Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSENPKVIGMKED SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

XP_022993210.1 uncharacterized protein LOC111489298 [Cucurbita maxima]1.3e-6695.45Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIG+KE+ESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDD+ AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

XP_023550786.1 uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]7.0e-6897.73Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSE PKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDDD AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]7.0e-6897.73Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSE PKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDDD AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

TrEMBL top hitse value%identityAlignment
A0A0A0LSR5 Uncharacterized protein3.4e-5276.69Show/hide
Query:  MSENPKVIGMKEDE-SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALG
        M +NPK + +KEDE +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+ AQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MSENPKVIGMKEDE-SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALG

Query:  GFLILSWAWARWKERRPKRRSDDDDENEDSRDT
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D+
Subjt:  GFLILSWAWARWKERRPKRRSDDDDENEDSRDT

A0A1S3C3J3 uncharacterized protein LOC1034964853.2e-5076.69Show/hide
Query:  MSENPKVIGMKEDE-SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALG
        M +NPK + MKEDE +PK PF WFSFLPKFD RLP P+NGGKK P  V+DE  K D+ AQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MSENPKVIGMKEDE-SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALG

Query:  GFLILSWAWARWKERRPKRRSDDDDENEDSRDT
        GFLILSWAWARWKERRP+RRS+DDDE +DS DT
Subjt:  GFLILSWAWARWKERRPKRRSDDDDENEDSRDT

A0A5D3CKR2 Uncharacterized protein3.2e-5076.69Show/hide
Query:  MSENPKVIGMKEDE-SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALG
        M +NPK + MKEDE +PK PF WFSFLPKFD RLP P+NGGKK P  V+DE  K D+ AQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MSENPKVIGMKEDE-SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALG

Query:  GFLILSWAWARWKERRPKRRSDDDDENEDSRDT
        GFLILSWAWARWKERRP+RRS+DDDE +DS DT
Subjt:  GFLILSWAWARWKERRPKRRSDDDDENEDSRDT

A0A6J1FFF8 uncharacterized protein LOC1114449951.0e-6999.24Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSENPKVIGMKED SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

A0A6J1JVP7 uncharacterized protein LOC1114892986.4e-6795.45Show/hide
Query:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
        MSE+PKVIG+KE+ESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDD+ AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG
Subjt:  MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGG

Query:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT
        FLILSWAWARWKERRPKRRSDDDDENEDSRDT
Subjt:  FLILSWAWARWKERRPKRRSDDDDENEDSRDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52230.1 unknown protein1.4e-1344.12Show/hide
Query:  KKPPATVMDERPKDDDGAQKP-----EFVRFP-KANLAVPSVEVEAD-VSGKTSNPAVIWQVYALGGFLILSWAWARWKERR----PKRRSDDDDENEDS
        K PPAT+    PK   G ++P     E V FP     +   ++ EA+  SG+TSN  ++WQVYALGGFL+L WAWARW ER      K  + DDD+ +D 
Subjt:  KKPPATVMDERPKDDDGAQKP-----EFVRFP-KANLAVPSVEVEAD-VSGKTSNPAVIWQVYALGGFLILSWAWARWKERR----PKRRSDDDDENEDS

Query:  RD
         D
Subjt:  RD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAGAACCCAAAAGTTATTGGGATGAAAGAGGATGAATCCCCTAAATTCCCCTTCACTTGGTTCTCTTTTCTTCCCAAGTTCGACCTCCGATTGCCGCTTCCGAT
CAACGGCGGCAAGAAACCGCCGGCTACGGTGATGGATGAACGTCCGAAGGACGACGACGGTGCTCAGAAGCCGGAGTTTGTGAGGTTTCCTAAAGCAAACTTGGCCGTTC
CTTCGGTGGAGGTTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTCATCTGGCAGGTATATGCCCTGGGAGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGA
TGGAAGGAGAGAAGGCCTAAAAGACGTTCAGATGATGACGATGAGAACGAGGATTCCAGGGATACCTAG
mRNA sequenceShow/hide mRNA sequence
AGCTGATCGCACTTTTTTGCTTTTCAGATTCAAAGAAAATGTCAGAGAACCCAAAAGTTATTGGGATGAAAGAGGATGAATCCCCTAAATTCCCCTTCACTTGGTTCTCT
TTTCTTCCCAAGTTCGACCTCCGATTGCCGCTTCCGATCAACGGCGGCAAGAAACCGCCGGCTACGGTGATGGATGAACGTCCGAAGGACGACGACGGTGCTCAGAAGCC
GGAGTTTGTGAGGTTTCCTAAAGCAAACTTGGCCGTTCCTTCGGTGGAGGTTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTCATCTGGCAGGTATATGCCC
TGGGAGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTAAAAGACGTTCAGATGATGACGATGAGAACGAGGATTCCAGGGATACCTAGTTG
TGTGTTTTGCCTTGAACAGCCCTTAATAAATGTTGATGAAGATACTTTTTAGTGTTAGAATCGATCTCGAGCTCATACCATTGTAATTTCGAGTTAATCAGTCATTTCCT
GACCTGACCCTTTGTCAATCCTTGAATATGATCTTATTTTGAAGTTGAAGCTGTCTCATTGAGATTCTCTA
Protein sequenceShow/hide protein sequence
MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWAR
WKERRPKRRSDDDDENEDSRDT