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Carg02444 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02444
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAutophagy-related protein
Genome locationCarg_Chr02:8684401..8684867
RNA-Seq ExpressionCarg02444
SyntenyCarg02444
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036126.1 apg-6, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-36100Show/hide
Query:  SQCLLLLSLSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        SQCLLLLSLSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
Subjt:  SQCLLLLSLSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

RYR58668.1 hypothetical protein Ahy_A05g024559 isoform A [Arachis hypogaea]5.7e-2595.16Show/hide
Query:  NDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        N CRYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSA+YEEKKDEDGFLY
Subjt:  NDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

RZB78086.1 Autophagy-related protein 8f isoform C [Glycine soja]1.3e-2487.32Show/hide
Query:  LSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        LS A  L    CRYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIY+EKKDEDGFLY
Subjt:  LSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

XP_028796824.1 autophagy-related protein 8B-like [Prosopis alba]2.2e-2481.43Show/hide
Query:  SGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +G   L P++CRYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV N+LPPT A+MSAIYEE KDEDGFLY
Subjt:  SGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

XP_042504725.1 autophagy-related protein 8f-like isoform X1 [Macadamia integrifolia]3.7e-2495.08Show/hide
Query:  DCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +CRYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIY+EKKDEDGFLY
Subjt:  DCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

TrEMBL top hitse value%identityAlignment
A0A445D680 Autophagy-related protein2.8e-2595.16Show/hide
Query:  NDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        N CRYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSA+YEEKKDEDGFLY
Subjt:  NDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

A0A445HWF4 Autophagy-related protein6.1e-2587.32Show/hide
Query:  LSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        LS A  L    CRYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIY+EKKDEDGFLY
Subjt:  LSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

A0A6J1DKS3 Autophagy-related protein4.0e-2498.31Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

A0A6J1K978 Autophagy-related protein4.0e-2498.31Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

I1LGN8 Autophagy-related protein6.1e-2587.32Show/hide
Query:  LSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        LS A  L    CRYLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTGAIMSAIY+EKKDEDGFLY
Subjt:  LSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

SwissProt top hitse value%identityAlignment
A1CQS1 Autophagy-related protein 82.2e-2483.33Show/hide
Query:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        I T +  +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY
Subjt:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

A2QPN1 Autophagy-related protein 82.2e-2483.33Show/hide
Query:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        I T +  +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY
Subjt:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

Q0C804 Autophagy-related protein 82.2e-2483.33Show/hide
Query:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        I T +  +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY
Subjt:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

Q2UBH5 Autophagy-related protein 82.2e-2483.33Show/hide
Query:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        I T +  +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY
Subjt:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

Q4WJ27 Autophagy-related protein 82.2e-2483.33Show/hide
Query:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        I T +  +YLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVD VLPPT A+MS+IYEE KDEDGFLY
Subjt:  ILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

Arabidopsis top hitse value%identityAlignment
AT2G05630.1 Ubiquitin-like superfamily protein2.1e-2589.83Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

AT2G05630.2 Ubiquitin-like superfamily protein2.1e-2589.83Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

AT2G45170.1 AUTOPHAGY 8E6.1e-2586.44Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVP+DLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

AT4G16520.1 Ubiquitin-like superfamily protein2.7e-2588.14Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY

AT4G16520.2 Ubiquitin-like superfamily protein2.7e-2588.14Show/hide
Query:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY
        +YLVPADLTVGQFVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLY
Subjt:  RYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCACAATGCCTTCTACTTCTCTCTCTTTCTGGGGCTAAGATTTTGACCCCCAATGACTGCAGGTACCTAGTTCCAGCGGACCTTACCGTGGGACAGTTTGTTTATGTCAT
CCGTAAAAGAATCAAATTGAGCCCAGAGAAAGCAATATTTATATTTGTGGACAACGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGACG
AAGATGGATTTCTGTAT
mRNA sequenceShow/hide mRNA sequence
TCACAATGCCTTCTACTTCTCTCTCTTTCTGGGGCTAAGATTTTGACCCCCAATGACTGCAGGTACCTAGTTCCAGCGGACCTTACCGTGGGACAGTTTGTTTATGTCAT
CCGTAAAAGAATCAAATTGAGCCCAGAGAAAGCAATATTTATATTTGTGGACAACGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGACG
AAGATGGATTTCTGTAT
Protein sequenceShow/hide protein sequence
SQCLLLLSLSGAKILTPNDCRYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY