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Carg02458 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02458
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L15
Genome locationCarg_Chr02:8616999..8618935
RNA-Seq ExpressionCarg02458
SyntenyCarg02458
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY84374.1 ribosomal protein L23/L15e family protein [Actinidia rufa]6.2e-0564.58Show/hide
Query:  TGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVD
        TGS E    L RNTGDS E+DTCTTR G     PGRGTT  LFV TVD
Subjt:  TGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVD

KAE8708314.1 hypothetical protein F3Y22_tig00110347pilonHSYRG00084 [Hibiscus syriacus]2.0e-0854.95Show/hide
Query:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLV
        ML TML AMTQE TGSAIQ T+T S EG H L R TG    + T TTR  L  EQPGR TT F FV T +F  V L F +L+  F LE ++
Subjt:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLV

KAG7036112.1 hypothetical protein SDJN02_02912 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-45100Show/hide
Query:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLVEDTTSI
        MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLVEDTTSI
Subjt:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLVEDTTSI

VDD03848.1 unnamed protein product, partial [Brassica rapa]6.2e-0559.32Show/hide
Query:  TQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVT
        T+ESTGSA + T+T SSE L    R T D  EK T TTR   LAEQPGR TTL  F VT
Subjt:  TQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVT

TrEMBL top hitse value%identityAlignment
A0A3P6BMR9 Uncharacterized protein (Fragment)3.0e-0559.32Show/hide
Query:  TQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVT
        T+ESTGSA + T+T SSE L    R T D  EK T TTR   LAEQPGR TTL  F VT
Subjt:  TQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVT

A0A6A3AUC2 Uncharacterized protein9.9e-0954.95Show/hide
Query:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLV
        ML TML AMTQE TGSAIQ T+T S EG H L R TG    + T TTR  L  EQPGR TT F FV T +F  V L F +L+  F LE ++
Subjt:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLV

A0A6A3CT69 Ribosomal protein L155.6e-0455.93Show/hide
Query:  AMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFV
        AMT+  TGS     STGS E  H L R TG  +E+ TCTTR GLL  QPGR TT   FV
Subjt:  AMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFV

A0A7J0ED07 Ribosomal protein L153.0e-0564.58Show/hide
Query:  TGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVD
        TGS E    L RNTGDS E+DTCTTR G     PGRGTT  LFV TVD
Subjt:  TGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVD

A0A7N0SWA0 Uncharacterized protein1.3e-0855.17Show/hide
Query:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCL
        M  TM  A TQ STGSA  STSTGSSE   P  R T  S E+DT TT   L  EQ GRGTT FL VVT D   +S   G    CFCL
Subjt:  MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCCACAATGCTGTTCGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTCCGAGGGCTTACATCCGCTGGCAAGAAATACAGG
GGACTCCGTGGAAAAGGACACTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAACAACACTCTTTCTCTTCGTCGTTACCGTTGATTTTGGTTATG
TTTCTCTATGTTTTGGTATCCTTATTATCTGCTTCTGTTTGGAGAATTTAGTGGAAGATACTACTTCGATCTAG
mRNA sequenceShow/hide mRNA sequence
GTTCTCCGGGCGAAAACCCTAGTTGGTGACTCCTCCCTGCAAGTTCTCTTTCCGATCCAATGGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAGTCAGAT
GTGATGAGGTTCCTACAGAGGGTGAGATGCTGGGAGTATCGCCAGCATCCATCCATTGTCCGCGTCAATCACCCCACTCGCCCTGATAAGGCTCGCCGTCTCGGCTACAA
GGCCAAGCAGGTTAAAAAAAAAAAAAAAAAAAAAAAATCTTTGATCATTTTGAGATTCAGTTTCGAGTGCAGATTCATACTAGCATTACCGTTTTGAAATTTATTTTTGA
GGTCTTCACTTGATGATTGGTTTCTCAAACGTGTGCGTACTATTTCTGTTGTACTACGCTTTAGAGTGACTAGCAGAGGTCTCCCTAGGTGATTTGAGTAGCATGTTTTC
GGTTATCAAGTTACTAAGGTCGTCTGAGTTGGATAAGCGGTATCCTTATGCGCTTACTTCACTCTGTGGATTTTCGTACAATGATTGGATACATCCTGAGGCTGGCTAAA
TTGAACTCAATCTCGGTCACCCAACCAAGCGAATTCTCTTCCTCTGAATCTTGCTTTTGTCGAGGTCGATACAGTTCATCATTTGTTAGTTATTCTATATGTTTTATTCC
CATGGTTAATTGTTTTGAAGTTACAGATAAACTTTGCATTTTGTCGGTCTAACTTGGTTATCTACATGTGCCATAATTTTGATAGGATTTAGAATGTTCTTGAAAATATG
ATTATGTTGTAATCAACCATATGTACCAATGAAATATCCTTTGGGTTGTGCTTTGTTTATTTATTAATTTTTTTTTTTGGCATTGTAAAGATAATTACTCTTCATCCTCA
AATGGTTACTTAAGAAATTGGTTGCAGGGTTATGTTGTTTACAGAGTCCGTGTGAGGCGTGGTGGTAGGAAGAGGCCAGTTCCCAAGGGTATTGTGTATGGAAAACCAAC
CAACCAGGGTGTTACCCAATTGAAGTTCCAGCGTAGCAAGAGATCAGTTGCAGAAGAACGAGCAGGACGAAAGTTGGGTGGTCTGAGGGTTCTCAATTCATACTGGATCA
ACGAGGATTCTACTTACAAGTACTATGAGGTGATATTGGTTGATGTTGCCCACAATGCTGTTCGCAATGACCCAAGAATCAACTGGATCTGCAATCCAGTCCACAAGCAC
AGGGAGCTCCGAGGGCTTACATCCGCTGGCAAGAAATACAGGGGACTCCGTGGAAAAGGACACTTGCACCACAAGGCCAGGCCTTCTCGCAGAGCAACCTGGAAGAGGAA
CAACACTCTTTCTCTTCGTCGTTACCGTTGATTTTGGTTATGTTTCTCTATGTTTTGGTATCCTTATTATCTGCTTCTGTTTGGAGAATTTAGTGGAAGATACTACTTCG
ATCTAGAATTTTTCCATCTTTATATTTACATCGAGAATTGTCAGGATTTTTCTAAACTAAGTTATAATTTTGTTCATCGCACTATCTGTTTTTTTAGATTTCATAACCAT
TTAAGTT
Protein sequenceShow/hide protein sequence
MLPTMLFAMTQESTGSAIQSTSTGSSEGLHPLARNTGDSVEKDTCTTRPGLLAEQPGRGTTLFLFVVTVDFGYVSLCFGILIICFCLENLVEDTTSI