CuGenDBv2

Gene ID	Carg02464
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr02:8588842..8590468
RNA-Seq Expression	Carg02464
Synteny	Carg02464
Gene Ontology terms	GO:0003729 - mRNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008437135.1 PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo]

4.3e-108

89.21

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Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRL EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA
        LNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKY+TA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA

XP_022958721.1 uncharacterized protein LOC111459862 [Cucurbita moschata]

1.3e-123

100

Show/hide

Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
        LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA

XP_022996178.1 uncharacterized protein LOC111491485 [Cucurbita maxima]

1.5e-121

98.76

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Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAALRFGFTATTIHVSSTSILTRTRP PKTITCVGWDPEGIFGPPQTGHIAR+EFKRRLERDAEAREAFE QVREEKERRQLLRASRVVPNNVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
        LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA

XP_023532969.1 uncharacterized protein LOC111794981 [Cucurbita pepo subsp. pepo]

1.4e-122

99.17

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Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREF RRLERDAEAREAFER+VREEKERRQLLRASRVVPNNVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
        LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA

XP_038874696.1 uncharacterized protein LOC120067243 [Benincasa hispida]

1.4e-111

90.46

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Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAAL FGFTATTIH  S+SILTR+RP+P+TITC+GWDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRL EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA
        LNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKYMTA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKI9 Uncharacterized protein

6.8e-107

88.8

Show/hide

Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAAL FGFT TTIH+ STSI  R+R  P+TITCVGWDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFER VREEKERR+ LR SRV+P NVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRL EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLTKILTSKDVKATLLDM+ERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA
        LNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKYMTA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA

A0A1S3AT96 uncharacterized protein LOC103482648

2.1e-108

89.21

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Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFER VREEKERR+ LR SRV+P+NVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRL EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA
        LNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKY+TA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA

A0A5A7TDT6 Uncharacterized protein

4.7e-108

89.21

Show/hide

Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAAL FGFTATTIH+ STSI  R+RP P+TITC+GWDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFER VREEKERR+ LR SRV P+NVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRL EEFFS +KLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQ ELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA
        LNRSLLALLDENIANAQ GNQK AAAFMEKVRGAVLKY+TA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTA

A0A6J1H2V9 uncharacterized protein LOC111459862

6.1e-124

100

Show/hide

Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
        LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA

A0A6J1KA41 uncharacterized protein LOC111491485

7.4e-122

98.76

Show/hide

Query:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF
        MAALRFGFTATTIHVSSTSILTRTRP PKTITCVGWDPEGIFGPPQTGHIAR+EFKRRLERDAEAREAFE QVREEKERRQLLRASRVVPNNVTGLIEYF
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
        LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA
Subjt:  LNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMTAA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G62780.1 unknown protein

4.8e-81

66.94

Show/hide

Query:  MAALRFGFTATTIHVSSTSILTRTRPNPK--TITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIE
        MA L FG  A     ++T++ T  R N +   ITC  WDP+G+ GP QTGHIAR EFKRRLERD+EAREAF++Q+REEKERRQ LR SRVVP+    LIE
Subjt:  MAALRFGFTATTIHVSSTSILTRTRPNPK--TITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIE

Query:  YFLDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVER
        YFLDTEAQ+IE+EIARLR RL +EFF+ I+LE+G++RFAV KT  +EDR+IELE LQKALEEGIEAYDKMQ EL+ A   LTK+LTS D+K TLLDMVE+
Subjt:  YFLDTEAQDIEFEIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVER

Query:  NELNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMT
        N++NRSLLALLDENIANA  GNQK+A  +MEK+R +VLKY+T
Subjt:  NELNRSLLALLDENIANAQSGNQKDAAAFMEKVRGAVLKYMT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGCTCTTAGGTTCGGCTTCACCGCCACCACCATCCACGTTTCATCAACGTCGATTCTCACCCGCACTCGCCCCAACCCAAAGACCATTACCTGCGTCGGATGGGA
CCCAGAAGGCATTTTTGGACCGCCTCAGACCGGCCATATCGCTCGAAGAGAGTTCAAAAGGCGGCTGGAGAGGGACGCCGAAGCTCGCGAGGCTTTCGAACGCCAAGTCC
GGGAAGAGAAAGAACGCCGCCAATTGCTTCGAGCGTCTCGTGTAGTTCCGAACAACGTGACTGGCCTTATTGAGTATTTTCTTGATACTGAAGCTCAGGATATTGAATTC
GAAATCGCCAGGTTGAGACCCAGGCTGACCGAGGAGTTTTTTTCGAGTATAAAACTTGAGCTGGGAGAGCTTAGATTTGCCGTTAACAAAACTGAGGCCATGGAAGACAG
AGTGATTGAGTTAGAAGCATTACAGAAAGCGCTTGAAGAAGGAATAGAAGCGTATGATAAAATGCAAGGCGAACTGGTAAAAGCAAGGGAAGGCTTAACCAAAATTTTAA
CATCAAAGGATGTAAAAGCTACCTTGTTGGATATGGTGGAACGAAACGAGCTCAATCGATCGCTACTAGCCCTTCTCGACGAAAACATAGCCAATGCGCAAAGCGGTAAC
CAGAAAGACGCTGCTGCTTTCATGGAAAAGGTTCGAGGGGCTGTTCTCAAGTACATGACAGCAGCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAALRFGFTATTIHVSSTSILTRTRPNPKTITCVGWDPEGIFGPPQTGHIARREFKRRLERDAEAREAFERQVREEKERRQLLRASRVVPNNVTGLIEYFLDTEAQDIEF
EIARLRPRLTEEFFSSIKLELGELRFAVNKTEAMEDRVIELEALQKALEEGIEAYDKMQGELVKAREGLTKILTSKDVKATLLDMVERNELNRSLLALLDENIANAQSGN
QKDAAAFMEKVRGAVLKYMTAA

Carg02464 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome