CuGenDBv2

Gene ID	Carg02470
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein LITTLE ZIPPER like
Genome location	Carg_Chr02:8566897..8567282
RNA-Seq Expression	Carg02470
Synteny	Carg02470
Gene Ontology terms	NA
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-43

100

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

XP_022159679.1 protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]

8.6e-31

83.33

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL +RRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

XP_022159680.1 protein LITTLE ZIPPER 2-like isoform X2 [Momordica charantia]

1.2e-32

84.38

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL+SRRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]

3.9e-31

81.63

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCI+ATQ ILFHQI TSKNRRR KRSKLQV RL+  RR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]

1.4e-41

98.98

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCITATQRILFHQIHTSKNRRRLKRSKLQVQRL SRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKF8 Uncharacterized protein

1.3e-29

77.55

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MC++ATQ +LFH I +SKNRR  KRS  QV RL+  RR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

A0A2R6Q867 Protein LITTLE ZIPPER like

1.0e-21

63.54

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI++T+RI    +     ++R KRSK++VQRL+ R+R  EEK GKD+ELKNL+LY EN TI+EENEKLR+KA++LHQENLALMTEF KKF HFD+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X2

5.8e-33

84.38

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL+SRRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X1

4.2e-31

83.33

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ
        MCI+AT+   FHQIHTSKNRRRLKRSKLQVQRL +RRR  EEK GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE  KKF H D+
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQ

A0A6J1E3C5 protein LITTLE ZIPPER 1-like

1.9e-31

81.63

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Query:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK
        MCI+ATQ ILFHQI TSKNRRR KRSKLQV RL+  RR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

SwissProt top hits

e value

%identity

Alignment

F4IG60 Protein LITTLE ZIPPER 1

4.0e-07

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Query:  RSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK
        +S +++ RLS RRR + E+  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +    K
Subjt:  RSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK

Q9LZX5 Protein LITTLE ZIPPER 2

3.1e-07

41.98

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Query:  FHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF
        +H  H SK      ++ L++  L+ RRR  +E+  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  FHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

2.9e-08

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Query:  RSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK
        +S +++ RLS RRR + E+  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +    K
Subjt:  RSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKK

AT3G60890.1 protein binding

2.2e-08

41.98

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Query:  FHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF
        +H  H SK      ++ L++  L+ RRR  +E+  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  FHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF

AT3G60890.2 protein binding

9.9e-09

43.21

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Query:  FHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF
        +H  H SK      ++ L++  L+SRRR   ++Q K++E++NL+L++ENQ+II ENE L++KA +LH EN AL    H K+
Subjt:  FHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKF

Sequences

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CDS sequence

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ATGTGCATCACTGCAACACAACGCATTCTGTTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTAAAAAGGTCCAAACTTCAAGTTCAGAGGCTTTCCAGCAGAAG
GAGATCATTCGAAGAGAAGCAGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTGTATTTGGAGAACCAAACTATAATTGAAGAGAATGAGAAGCTGAGGGAGAAAGCTA
ATATCCTTCATCAAGAGAACTTGGCTTTAATGACTGAGTTTCACAAAAAATTCCCGCATTTTGATCAGAGAAAATGA

mRNA sequence

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Protein sequence

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MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK

Carg02470 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome