; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02493 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02493
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein STAY-GREEN, chloroplastic-like
Genome locationCarg_Chr02:8462770..8463439
RNA-Seq ExpressionCarg02493
SyntenyCarg02493
Gene Ontology termsNA
InterPro domainsIPR024438 - Staygreen protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606134.1 Protein STAY-GREEN-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4598.98Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

KAG7036077.1 Protein STAY-GREEN 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]9.3e-59100Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQIPR
        MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQIPR
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQIPR

Query:  VIQNENFNIILILLMKYKSLNK
        VIQNENFNIILILLMKYKSLNK
Subjt:  VIQNENFNIILILLMKYKSLNK

XP_022958242.1 protein STAY-GREEN, chloroplastic-like [Cucurbita moschata]2.6e-4598.98Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

XP_022995702.1 protein STAY-GREEN, chloroplastic-like [Cucurbita maxima]1.0e-4497.96Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MRGLTANSSVLLAPSNPYQ+SSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

XP_023533584.1 protein STAY-GREEN, chloroplastic-like [Cucurbita pepo subsp. pepo]2.6e-4598.98Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

TrEMBL top hitse value%identityAlignment
A0A0A0KKN5 STAY-GREEN3.7e-3787Show/hide
Query:  MRGLTANSSVLLAP-SNPY-QNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MR LT NSS LL P SNPY  +SSLFP KRKSKKKNH MVP+ARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQ+INNSQ+
Subjt:  MRGLTANSSVLLAP-SNPY-QNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

A0A1S3ATY7 protein STAY-GREEN, chloroplastic-like4.1e-3686Show/hide
Query:  MRGLTANSSVLLAP-SNPYQ-NSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MR LT+NSS LL P SNPYQ +SSLF  KRKSK+KNH MVP+ARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQ+INNSQ+
Subjt:  MRGLTANSSVLLAP-SNPYQ-NSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

A0A6J1H1B4 protein STAY-GREEN, chloroplastic-like1.3e-4598.98Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

A0A6J1JZP7 protein STAY-GREEN, chloroplastic-like4.8e-4597.96Show/hide
Query:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        MRGLTANSSVLLAPSNPYQ+SSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

A0A6P5YBV6 protein STAY-GREEN, chloroplastic-like1.8e-3184.44Show/hide
Query:  PSNP-----YQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        PSNP      QN SLF S+R+SKKKN A+VPVARLFGPAIFEASKLKVLFLGVDEKKHPGK PRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  PSNP-----YQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

SwissProt top hitse value%identityAlignment
A7VLV1 Protein STAY-GREEN, chloroplastic4.0e-2873.56Show/hide
Query:  PSNPYQNSSLFPSKRK--SKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        PS   Q    FP +R+  + KKN ++VPVARLFGPAIFEASKLKVLFLG+DE KHPG  PRTYTLTHSD+TSKLTLAISQTINNSQ+
Subjt:  PSNPYQNSSLFPSKRK--SKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

A9YF60 Protein STAY-GREEN homolog, chloroplastic2.9e-3176.24Show/hide
Query:  MRGLTANSSVLLAPS--NPYQNSSLFPSK-RKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ
        M  LTA+   L+APS  NP ++SSLF  K R+   KN ++VPVARLFGPAIFEASKLKVLFLGVDEKKHPGK PRTYTLTHSDITSKLTLAISQTINNSQ
Subjt:  MRGLTANSSVLLAPS--NPYQNSSLFPSK-RKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQ

Query:  I
        +
Subjt:  I

O82741 Magnesium dechelatase SGR1, chloroplastic7.2e-3078.57Show/hide
Query:  SNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        SN   +SSLF + R+SKKKN ++VPVARLFGPAIFE+SKLKVLFLGVDEKKHP   PRTYTLTHSDIT+KLTLAISQ+INNSQ+
Subjt:  SNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

Q4JFW8 Protein STAY-GREEN 1, chloroplastic5.5e-3073.2Show/hide
Query:  GLTANSSVLLAPSNPYQNSSLFPSKRKSK-KKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        G    S V+ +  N  Q SS+F  K + K KKN ++VPVARLFGPAIFEASKLKVLFLGVDE+KHPGK PRTYTLTHSDITSKLTLAISQTINNSQ+
Subjt:  GLTANSSVLLAPSNPYQNSSLFPSKRKSK-KKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

Q66WT5 Magnesium dechelatase SGR2, chloroplastic1.0e-2882.05Show/hide
Query:  SSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        SSL  + R+SK KN ++VPVARLFGPAIFEASKLKVLFLGVDEKKHP K PRTYTLTHSDIT+KLTLAISQ+INNSQ+
Subjt:  SSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

Arabidopsis top hitse value%identityAlignment
AT1G44000.1 unknown protein4.4e-0646.38Show/hide
Query:  NHAMVPVARLFGP-AIFEASKLKVLFLG--VDEKKHPGKF-PRTYTLTHSDITSKLTLAISQTINNSQI
        N  +    RL  P A F++SKLKV FLG  ++ K + G   PRTY L+H D T+ LTL IS  IN  Q+
Subjt:  NHAMVPVARLFGP-AIFEASKLKVLFLG--VDEKKHPGKF-PRTYTLTHSDITSKLTLAISQTINNSQI

AT4G11910.1 INVOLVED IN: biological_process unknown7.4e-3082.05Show/hide
Query:  SSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        SSL  + R+SK KN ++VPVARLFGPAIFEASKLKVLFLGVDEKKHP K PRTYTLTHSDIT+KLTLAISQ+INNSQ+
Subjt:  SSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

AT4G11911.1 unknown protein5.5e-2567.86Show/hide
Query:  SNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        S+  ++SS+  + R SK+K  +M PVARLFG AIFEASKL V FLGVDEKKHP   PRTYT THSDIT+KLTLAIS +INNSQ+
Subjt:  SNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI

AT4G22920.1 non-yellowing 15.1e-3178.57Show/hide
Query:  SNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI
        SN   +SSLF + R+SKKKN ++VPVARLFGPAIFE+SKLKVLFLGVDEKKHP   PRTYTLTHSDIT+KLTLAISQ+INNSQ+
Subjt:  SNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGTTTGACGGCGAATTCTTCTGTTCTTCTTGCTCCTTCAAACCCATATCAGAATTCCTCTCTGTTTCCTTCTAAACGCAAGTCCAAGAAGAAGAACCATGCCAT
GGTTCCTGTAGCGAGGCTGTTTGGGCCGGCCATATTTGAAGCTTCCAAGTTAAAGGTTCTGTTTTTAGGAGTGGATGAAAAGAAGCATCCTGGCAAATTTCCCAGGACTT
ACACGCTTACACATAGCGATATTACCTCTAAACTTACTCTCGCTATTTCTCAGACCATTAACAACTCTCAGATTCCGCGAGTAATCCAGAATGAAAATTTCAACATAATA
TTGATACTACTAATGAAATACAAGTCGTTGAATAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTTTTCTTTTTCTTTTCCTTTTTCTCCTTTTGTTTCGTAGAAGCCTTGTTTTCTGCAATAGCATTCCAGAGCTTTTCTTTTTCAACGAACCAACTCCCGACTTTCTGGA
CCTAATTCTGCAACCCAATCCCCAAAAGCAAACGCCATCGGAGAATCACAGAAGAACAAACAAAAATGAGGGGTTTGACGGCGAATTCTTCTGTTCTTCTTGCTCCTTCA
AACCCATATCAGAATTCCTCTCTGTTTCCTTCTAAACGCAAGTCCAAGAAGAAGAACCATGCCATGGTTCCTGTAGCGAGGCTGTTTGGGCCGGCCATATTTGAAGCTTC
CAAGTTAAAGGTTCTGTTTTTAGGAGTGGATGAAAAGAAGCATCCTGGCAAATTTCCCAGGACTTACACGCTTACACATAGCGATATTACCTCTAAACTTACTCTCGCTA
TTTCTCAGACCATTAACAACTCTCAGATTCCGCGAGTAATCCAGAATGAAAATTTCAACATAATATTGATACTACTAATGAAATACAAGTCGTTGAATAAATGA
Protein sequenceShow/hide protein sequence
MRGLTANSSVLLAPSNPYQNSSLFPSKRKSKKKNHAMVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKFPRTYTLTHSDITSKLTLAISQTINNSQIPRVIQNENFNII
LILLMKYKSLNK