CuGenDBv2

Gene ID	Carg02496
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ubiquitin carboxyl-terminal hydrolase MINDY-1
Genome location	Carg_Chr02:8448520..8450866
RNA-Seq Expression	Carg02496
Synteny	Carg02496
Gene Ontology terms	GO:0071108 - protein K48-linked deubiquitination (biological process) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function) GO:0016807 - cysteine-type carboxypeptidase activity (molecular function) GO:1990380 - Lys48-specific deubiquitinase activity (molecular function)
InterPro domains	IPR007518 - MINDY deubiquitinase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606132.1 Ubiquitin carboxyl-terminal hydrolase MINDY-1, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-37

100

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

KAG7036074.1 hypothetical protein SDJN02_02874, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-38

100

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Query:  MLDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDLK
        MLDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDLK
Subjt:  MLDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDLK

XP_022958349.1 ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1 [Cucurbita moschata]

5.0e-37

100

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

XP_022995875.1 ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1 [Cucurbita maxima]

5.0e-37

100

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

XP_023532814.1 ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1 [Cucurbita pepo subsp. pepo]

5.0e-37

100

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DS61 protein FAM63A isoform X1

4.3e-34

94.87

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMT NFKEFKVES SNESWDE NAM STADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

A0A5A7TJ49 Protein FAM63A isoform X2

4.3e-34

94.87

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMT NFKEFKVES SNESWDE NAM STADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

A0A6J1DY84 ubiquitin carboxyl-terminal hydrolase MINDY-1

5.4e-37

98.72

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVE+HSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

A0A6J1H4V0 ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1

2.4e-37

100

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

A0A6J1K549 ubiquitin carboxyl-terminal hydrolase MINDY-1-like isoform X1

2.4e-37

100

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Query:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
        LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL
Subjt:  LDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDL

SwissProt top hits

e value

%identity

Alignment

A3KQS4 Ubiquitin carboxyl-terminal hydrolase MINDY-1

4.5e-04

30.77

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Query:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFK-----EFKVESHSNESWDEHNAMASTADYLASIDATKHAG
        G LYLL TDQG++ +  +VWE L+ V GD  F   +F+     +    + +  S  +   M    DYL ++   +  G
Subjt:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFK-----EFKVESHSNESWDEHNAMASTADYLASIDATKHAG

Q2KJ22 Ubiquitin carboxyl-terminal hydrolase MINDY-1

1.5e-04

48.65

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Query:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF
        G LYLL TDQG++ +  +VWE L+ V+GD+ F   +F
Subjt:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF

Q5R7G8 Ubiquitin carboxyl-terminal hydrolase MINDY-1

5.8e-04

48.57

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Query:  LYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF
        LYLL TDQG++ +  +VWE L+ V+GD+ F   +F
Subjt:  LYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF

Q6PDI6 Ubiquitin carboxyl-terminal hydrolase MINDY-2

3.4e-04

51.35

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Query:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF
        GQLYLL TDQG++ +  +VWE L+ V+GD  F    F
Subjt:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF

Q8NBR6 Ubiquitin carboxyl-terminal hydrolase MINDY-2

4.5e-04

51.35

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Query:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF
        GQLYLL TDQG++ +  +VWE L+ V+GD  F    F
Subjt:  GQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNF

Arabidopsis top hits

e value

%identity

Alignment

AT4G11860.1 Protein of unknown function (DUF544)

3.1e-24

62.5

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Query:  DGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESH---SNESWDEHNAMASTADYLASIDATKHAGLDL
        +G+LYLLATDQGY++QPDLVWEKLNEVNGDT FMT  FK+F ++S    ++ +WDE NA+ +TADYLASI+    AG+D+
Subjt:  DGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESH---SNESWDEHNAMASTADYLASIDATKHAGLDL

AT4G22960.1 Protein of unknown function (DUF544)

1.7e-06

36.92

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Query:  QLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASI
        +LY L T +GY  Q DLVWE+ N+++GD+ F TG F +F  +       D+ +A++ T + ++ I
Subjt:  QLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASI

Sequences

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CDS sequence

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mRNA sequence

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ATGCTTGATGGCCAGCTTTATCTCTTAGCTACAGACCAAGGTTACATTCATCAACCTGATTTGGTGTGGGAAAAGCTAAATGAGGTGAATGGAGATACTTTATTTATGAC
GGGTAATTTCAAAGAATTCAAAGTAGAAAGTCATTCTAATGAATCTTGGGATGAACATAATGCCATGGCAAGCACCGCGGATTATCTTGCAAGCATTGATGCCACCAAAC
ATGCCGGATTGGATTTGAAGTAACTTTCTATCTCGTTACTTTTAGTATATTACTCTTTTTACGAAAGCATGCAAAGGAATGCTGCAAAACACTTCCTATCTTGTTATTGC
TATTTTTCCAGTACATATTTTCTTATGTTTGTGTTTATTCGCATTGGTTGGGAGCTTATCTCTCAGGGACTGACGCAAAACCGAAGGAAAAGTGCAGTGTGATGTGAATT
TTGGCTTTGCAGAATCCATAGAAAATCATTTTTATTTAATTTTATTTAAATTTTGTTCCCTGTAAATTGTTTGTTTGTTGTCTTCTTAACAGCATATATCACCACATGCT
GTTGACTAACCTAATTCCTTTATGAGAGTTTGGATACAGTTTTCCATTTTGTATATATATTTATATATATCCCCACTCCCATTTCTTTAGGCTCTTCAAATCTTTTTCTT
CTGAATATTAAGATCTGAGACGGAGAGATCATAAA

Protein sequence

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MLDGQLYLLATDQGYIHQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHSNESWDEHNAMASTADYLASIDATKHAGLDLK

Carg02496 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome