; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02559 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02559
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLEA_2 domain-containing protein
Genome locationCarg_Chr02:8094787..8095386
RNA-Seq ExpressionCarg02559
SyntenyCarg02559
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606065.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]2.0e-103100Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
        MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
Subjt:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF

Query:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
        DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
Subjt:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE

XP_008437349.1 PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]1.9e-6165.09Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAE
        MGE S SFPL H QAHHKT +            E SNKCFIYIFS+FVFL VALLIF+LIVLRVNSP+I+LS++S+ KFS+SN N+SSS  SL+L+  A 
Subjt:  MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAE

Query:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL
        F++DNSNFGPF FD  TV  +YGG+I GERSTGGGRAEAKG+ RMNV+VE S +NVS     +GIL++SSF K  GR+ LIHV R+R+ SEISCS+NLDL
Subjt:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL

Query:  NTHQIQPRWVCE
        NTHQIQ  WVCE
Subjt:  NTHQIQPRWVCE

XP_022958536.1 uncharacterized protein LOC111459739 [Cucurbita moschata]4.5e-10399.5Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
        MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
Subjt:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF

Query:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
        DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVC+
Subjt:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE

XP_023532981.1 uncharacterized protein LOC111794996 [Cucurbita pepo subsp. pepo]1.7e-9794.97Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
        M EH+HSFPLPHSQAHHKT KNEPSNKCFIY+FS+FVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFS+DNSNFGPFIF
Subjt:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF

Query:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
        DYVTVVFMYGGVIVGERS+GGGRAEAKGTTRMNVSVE SVENVSSDLNGSGILNMSSFAKFGGRI LIHVLRKRIWSEISCSINLDLNTHQI PRWVCE
Subjt:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE

XP_038875090.1 late embryogenesis abundant protein At1g64065 [Benincasa hispida]9.8e-6666.19Show/hide
Query:  MGEHSHSFPLPHSQAHH-----------KTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFS
        M E S SFPL H QAHH           KT + E SNKCFIY+FS+FVFL VA+LIF+LIVLRVNSP+I LSS+S+ KFSI+N NSSS SLNLT+IAEF+
Subjt:  MGEHSHSFPLPHSQAHH-----------KTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFS

Query:  LDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNT
        +DNSNFGPF FD  TV  MYGG IVGE+STG GRAEAKG+ RMNV++EAS +N+SSD N  GILN++SF K  GR+ LIH+ R+R  SEI+CS+NLD+NT
Subjt:  LDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNT

Query:  HQIQPRWVCE
        HQIQ  WVCE
Subjt:  HQIQPRWVCE

TrEMBL top hitse value%identityAlignment
A0A0A0KQT7 LEA_2 domain-containing protein1.5e-5965.57Show/hide
Query:  MGEHSHSFPLPHSQAHHKTP-----------KNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSIS-NTNSSS-SSLNLTLIAE
        MGE S SFPL H QAHHK             + E SNKCFIYIFS+FVFL VALLIF+LIVLRVNSP+I LSSIS  + S+S NTNSSS +SLNL+  AE
Subjt:  MGEHSHSFPLPHSQAHHKTP-----------KNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSIS-NTNSSS-SSLNLTLIAE

Query:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL
        F++DNSNFGPF FD  TV  +YGG+I GERSTGGGRA AKG+ RMNV+VE S +NVS     +GILN SSF K  GR+ LIH+ R+R+ SEISCS+NLDL
Subjt:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL

Query:  NTHQIQPRWVCE
        NTHQIQ  WVCE
Subjt:  NTHQIQPRWVCE

A0A1S3ATY3 late embryogenesis abundant protein At1g640659.3e-6265.09Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAE
        MGE S SFPL H QAHHKT +            E SNKCFIYIFS+FVFL VALLIF+LIVLRVNSP+I+LS++S+ KFS+SN N+SSS  SL+L+  A 
Subjt:  MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAE

Query:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL
        F++DNSNFGPF FD  TV  +YGG+I GERSTGGGRAEAKG+ RMNV+VE S +NVS     +GIL++SSF K  GR+ LIHV R+R+ SEISCS+NLDL
Subjt:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL

Query:  NTHQIQPRWVCE
        NTHQIQ  WVCE
Subjt:  NTHQIQPRWVCE

A0A5A7TL68 Late embryogenesis abundant protein2.1e-6165.09Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAE
        MGE S SFPL H QAHHKT +            E SNKCFIYIFS+FVFL VALLIF+LIVLRVNSP+I+LS++S+ KFS+SN N+SSS  SL+L+  A 
Subjt:  MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAE

Query:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL
        F +DNSNFGPF FD  TV  +YGG+I GERSTGGGRAEAKG+ RMNV+VE S +NVS     +GIL++SSF K  GR+ LIHV R+R+ SEISCS+NLDL
Subjt:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL

Query:  NTHQIQPRWVCE
        NTHQIQ  WVCE
Subjt:  NTHQIQPRWVCE

A0A6J1H2C0 uncharacterized protein LOC1114597392.2e-10399.5Show/hide
Query:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
        MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF
Subjt:  MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIF

Query:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
        DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVC+
Subjt:  DYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE

A0A6J1I3M2 uncharacterized protein LOC1114688751.0e-6060.38Show/hide
Query:  MGEHSHSFPLPHSQAHHKTP-------------KNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAE
        M + S SFP+ H +AHHK+              + E SNKCFIY+FS+FVFL VA+LIF+LIVLRVNSP +  SS+SV KFS+SNTNSSS SLNLT+ A+
Subjt:  MGEHSHSFPLPHSQAHHKTP-------------KNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAE

Query:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL
         ++DNSNFGPF FDY +V F+Y G IVG+ +TG GRA+AKGT  MNV+V+AS  N+S+D N S +LN+SSFA   GR+ LIH+ R+R  SEISCS+ LDL
Subjt:  FSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDL

Query:  NTHQIQPRWVCE
        NTHQIQ  WVCE
Subjt:  NTHQIQPRWVCE

SwissProt top hitse value%identityAlignment
Q6DST1 Late embryogenesis abundant protein At1g640653.8e-1235.14Show/hide
Query:  EPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYGG-VIVGERSTGG
        EP  KC +Y  +  V +    LI S I LR++ P I+  SIS R    S  NS++   N TL+++ S+ NSNFG F F+  T+  +Y    +VGE    G
Subjt:  EPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYGG-VIVGERSTGG

Query:  GRAEAKGTTRM-NVSVE------ASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
         R EA  T R+  V VE         +++  DL   G L + S A+  GRI ++   R ++ S +SC++ L+L    IQ   +CE
Subjt:  GRAEAKGTTRM-NVSVE------ASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE

Arabidopsis top hitse value%identityAlignment
AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.7e-1335.14Show/hide
Query:  EPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYGG-VIVGERSTGG
        EP  KC +Y  +  V +    LI S I LR++ P I+  SIS R    S  NS++   N TL+++ S+ NSNFG F F+  T+  +Y    +VGE    G
Subjt:  EPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYGG-VIVGERSTGG

Query:  GRAEAKGTTRM-NVSVE------ASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE
         R EA  T R+  V VE         +++  DL   G L + S A+  GRI ++   R ++ S +SC++ L+L    IQ   +CE
Subjt:  GRAEAKGTTRM-NVSVE------ASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE

AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family5.1e-1226.29Show/hide
Query:  KCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKF-SISNTNS-SSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRA
        KC I + ++ + L   +L     V RV  P I ++ + V    S++ TN       N+++I + S+ N N   F +   T    Y G +VGE     G+A
Subjt:  KCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKF-SISNTNS-SSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYGGVIVGERSTGGGRA

Query:  EAKGTTRMNVSVEASVENVSSD------LNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQ
            T+RMNV+V+  ++ + SD      ++ SG++N+ S+ + GG++ ++ +++K +  +++C++ +++    IQ
Subjt:  EAKGTTRMNVSVEASVENVSSD------LNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAACACTCCCACAGCTTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCCAAAAAACGAACCATCAAACAAATGCTTCATCTACATCTTCTCCTCCTTCGT
CTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGCAAGTTTTCCATCTCTAATACTA
ATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCCTTGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGC
GGCGTCATCGTCGGCGAAAGGAGTACTGGCGGGGGCAGGGCTGAGGCGAAGGGGACGACGAGGATGAACGTTTCTGTTGAAGCTTCTGTGGAGAATGTTAGCAGCGATTT
GAATGGTTCGGGGATTTTGAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCATTTGATTCATGTTTTAAGAAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTA
ATCTGGATTTGAACACTCATCAAATTCAGCCTCGTTGGGTTTGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAACACTCCCACAGCTTTCCATTGCCACACTCCCAAGCTCACCACAAAACTCCAAAAAACGAACCATCAAACAAATGCTTCATCTACATCTTCTCCTCCTTCGT
CTTCCTCTGCGTCGCCCTTCTGATCTTCTCTCTCATCGTTCTGCGCGTTAATTCCCCGACCATCGACCTCTCTTCCATCTCCGTCCGCAAGTTTTCCATCTCTAATACTA
ATTCCTCTTCCTCCTCGCTTAATCTGACCTTGATTGCTGAATTCTCCCTTGACAATTCGAACTTCGGTCCCTTCATTTTCGATTACGTCACCGTCGTTTTCATGTACGGC
GGCGTCATCGTCGGCGAAAGGAGTACTGGCGGGGGCAGGGCTGAGGCGAAGGGGACGACGAGGATGAACGTTTCTGTTGAAGCTTCTGTGGAGAATGTTAGCAGCGATTT
GAATGGTTCGGGGATTTTGAATATGAGTAGCTTTGCGAAATTTGGAGGGAGAATTCATTTGATTCATGTTTTAAGAAAGAGGATTTGGTCGGAGATTAGTTGTTCCATTA
ATCTGGATTTGAACACTCATCAAATTCAGCCTCGTTGGGTTTGTGAGTGA
Protein sequenceShow/hide protein sequence
MGEHSHSFPLPHSQAHHKTPKNEPSNKCFIYIFSSFVFLCVALLIFSLIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMYG
GVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIHVLRKRIWSEISCSINLDLNTHQIQPRWVCE