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Carg02570 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02570
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionarabinogalactan peptide 22-like
Genome locationCarg_Chr02:8022783..8024532
RNA-Seq ExpressionCarg02570
SyntenyCarg02570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1572Show/hide
Query:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS
        M VVA NK+P+GV + V F LAML PA A   SL+PAQPP ASDGTS+DQGIAYVLMLLAL+LTYIIH A+L IS
Subjt:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS

KAG6606052.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2096.83Show/hide
Query:  LVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        L+AVAFALAMLFPASAADP LSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  LVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

KAG7036000.1 Arabinogalactan peptide 20 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-28100Show/hide
Query:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

XP_022996281.1 arabinogalactan peptide 22-like [Cucurbita maxima]3.4e-2797.37Show/hide
Query:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAY KVPYGVLVAVAF LAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

XP_023532560.1 arabinogalactan peptide 20-like [Cucurbita pepo subsp. pepo]3.1e-2898.68Show/hide
Query:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAYNKVPYGVLVAVAF LAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein1.6e-0964.94Show/hide
Query:  MEVVAYNKVPY-GVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        M VVA  KVP+ G+L  VA  L  L  +SA   SLSPAQPP   DGTS+DQGIAYVLMLLAL+LTYIIH A+L +SL
Subjt:  MEVVAYNKVPY-GVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

A0A1S3ATI9 arabinogalactan peptide 22-like2.0e-0963.64Show/hide
Query:  MEVVAYNKVPY-GVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        M VVA  K+P+ G+L  VA  L  L PA A   SLSPAQPP  SDGTS+DQGIAY LMLLAL+LTYIIH A+  +SL
Subjt:  MEVVAYNKVPY-GVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

A0A5D3C2F1 Arabinogalactan peptide 22-like2.0e-0963.64Show/hide
Query:  MEVVAYNKVPY-GVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        M VVA  K+P+ G+L  VA  L  L PA A   SLSPAQPP  SDGTS+DQGIAY LMLLAL+LTYIIH A+  +SL
Subjt:  MEVVAYNKVPY-GVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

A0A6J1CXM0 arabinogalactan peptide 22-like9.2e-1060.76Show/hide
Query:  MEVVAYNKVPYGVL--VAVAFALAMLFP--ASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS
        M V   N +P G+L  VAVAF L    P  A A   S+SPAQP   SDGTS+DQGIAY LMLLAL+LTYIIH A+L IS
Subjt:  MEVVAYNKVPYGVL--VAVAFALAMLFP--ASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS

A0A6J1K4A3 arabinogalactan peptide 22-like1.7e-2797.37Show/hide
Query:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAY KVPYGVLVAVAF LAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 168.5e-0554.9Show/hide
Query:  AFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +F  A++   + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  AFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Q8L9T8 Arabinogalactan protein 415.9e-0655.17Show/hide
Query:  YGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +GV   V+   A+L P + A  S +PA  P  SDGT++DQGIAYVLML+AL+LTY+IH
Subjt:  YGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Q9FK16 Arabinogalactan protein 228.5e-0552.46Show/hide
Query:  KVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        K P  +L        +L P  A   S SPA  P  SDGTS+DQGIAYVLM++AL LTY IH
Subjt:  KVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Q9M373 Arabinogalactan protein 207.7e-0655.36Show/hide
Query:  VLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        V+   AF  A++ P + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  VLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 166.1e-0654.9Show/hide
Query:  AFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +F  A++   + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  AFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

AT3G61640.1 arabinogalactan protein 205.5e-0755.36Show/hide
Query:  VLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        V+   AF  A++ P + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  VLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

AT5G24105.1 arabinogalactan protein 414.2e-0755.17Show/hide
Query:  YGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +GV   V+   A+L P + A  S +PA  P  SDGT++DQGIAYVLML+AL+LTY+IH
Subjt:  YGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

AT5G53250.1 arabinogalactan protein 226.1e-0652.46Show/hide
Query:  KVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        K P  +L        +L P  A   S SPA  P  SDGTS+DQGIAYVLM++AL LTY IH
Subjt:  KVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCGTTGCTTATAATAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTTGCTTTGGCTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGC
CCAACCTCCCATTGCTAGCGATGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCTGATGTTGTTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAA
TCAGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ACCCTGGATTGGTTGAAAGCCACACCGCCATTGCAACGCCGTGGAGAGCAGCCATCGTCGTCTTCGGGATTGAGTAATTCAGTTTGTGTGTTAGTCTCTCTCTCCCGCGC
CTCTCCGGAGAGGGAGATTAATTGTCGTCGAACACTATATAACAACAATAACAATGGAGGTCGTTGCTTATAATAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTT
GCTTTGGCTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGCCCAACCTCCCATTGCTAGCGATGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCT
GATGTTGTTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAATCAGTTTGTAAAATTAGTGCACAAAATAATTAAATTCAATCCCGAGAGCTCCAATGT
AAAAAGTGGGGTTTTTGTTTTCTTTTCCTTCGCAGTTTAATGTCAATTGATGCAATGATCATTTCTTTTTTACCTCAATGCTCCAATGTTGAGTGGTTGGATGATGTTTT
TCTAAAGAGTAAAAAAGCTTCCCAGAATAATGTATTGCTCACAAACAACAGAGATCGATCTGCTAGAAACTTCAAAGATTCCCAAAATAATTAGACAAATCTTTCAACTT
CAACAAAATTTATTGGATTTGTTTGGAACTAACTCCATGAAGGAATTCTGTCATCATTTTGATAGAATTCAGTCCCGAATCAGACAATGTCTCCTACAAATGGAAACTTC
AATTGCTTCCTTCAAGTGCTCTTCTTACCACTTCGTTTTGCTCGTTCTTCATCAGCCAACGAGAACTTTTTCACTTTCTGGCGAAGGATGAAGCAACAAATTCAAGCAAA
AGAAAAGAACGGTTACATTTTGTTGCTTATACAGCAAATATGAATATGAATGTGAAGCAAATGTTAAGCGTTTAGAATAGTGAATCTATGTGCCTGGAATGTTGAGGACA
AAAAGTTTGAGCCAATCCGAACAAATAATCAAATCAAGAAACCACGCGTTTGAGTATTTTAATCAGCGTTGCAGTGAGAAGTGAATTACAATTACCTGCCATATCCTAAA
TTGTGAAATCAAAGATCATTCCAGGACACTAGATTGTCATTTCAAGCATAATCCTCGATTTCACGAATCCTAATCTAAACCTAGAAAAATAAATTATCTAATATCAATCA
CGATTCGGAGAATAACAATCGAACTCCATGGAATAAAAAAATCAATCGATACTCAGCAAATCCTATTCAGAGTGCAAGGCGATCTAATTCGAAAATTCCGAAAAGAAACA
AAGCATCAATTGAGTTCATCAAATATCGAAATAAACACGAACAGTTAGGGCAAAAATTGAACAGAGAAAACGAATACCTTACTGAGAACGCATTCTCGCAAAGAATGAAG
GAGACGGTAGCATTTCTCTTGATCGAACGGAGACTCCGTAACGCAATTGAGCAAATCGAGAGCTTCTTGAGCGCAAACCGGCTGAGCTTGAGCATCATCCATGGCGGAAC
AGTAAGTGGATTTCAAAACCAGTGAGCTAGCTGCAGCAGCTTGTTTATGAAGGAATCGCAAAAACAATGGGAAGGCGCATTTGGATTAAGAAAAAAAAAAGGAAACCAAA
GCTGCGGCTAAAGG
Protein sequenceShow/hide protein sequence
MEVVAYNKVPYGVLVAVAFALAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL