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Carg02578 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02578
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCarg_Chr02:7981865..7982266
RNA-Seq ExpressionCarg02578
SyntenyCarg02578
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606040.1 hypothetical protein SDJN03_03357, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6699.25Show/hide
Query:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
        MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
Subjt:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD

Query:  HEGALTIPCRPSELERILAEEWEEEEENENRCF
        HEGALTIPCRPSELERILAEEW EEEENENRCF
Subjt:  HEGALTIPCRPSELERILAEEWEEEEENENRCF

XP_022958473.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.4e-68100Show/hide
Query:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
        MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
Subjt:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD

Query:  HEGALTIPCRPSELERILAEEWEEEEENENRCF
        HEGALTIPCRPSELERILAEEWEEEEENENRCF
Subjt:  HEGALTIPCRPSELERILAEEWEEEEENENRCF

XP_022996166.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.0e-6696.99Show/hide
Query:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
        MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFD E+GDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
Subjt:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD

Query:  HEGALTIPCRPSELERILAEEWEEEEENENRCF
        HEGALT+PCRPSELERILAEEWEEEEENENRCF
Subjt:  HEGALTIPCRPSELERILAEEWEEEEENENRCF

XP_023521419.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]1.0e-6698.51Show/hide
Query:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
        MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
Subjt:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD

Query:  HEGALTIPCRPSELERILAEEW-EEEEENENRCF
        HEGALTIPCRPSELERILAEEW EEEEENENRCF
Subjt:  HEGALTIPCRPSELERILAEEW-EEEEENENRCF

XP_038902788.1 auxin-responsive protein SAUR50-like [Benincasa hispida]7.5e-5489.52Show/hide
Query:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIP
        KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D+E+GDD+STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALT+P
Subjt:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIP

Query:  CRPSELERILAEEWEEEEENENRC
        CRPSELERILAEEW EEEE EN C
Subjt:  CRPSELERILAEEWEEEEENENRC

TrEMBL top hitse value%identityAlignment
A0A0A0KGI2 Uncharacterized protein4.5e-5288Show/hide
Query:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDD-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTI
        KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D+ +GDD+ STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALT+
Subjt:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDD-STPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTI

Query:  PCRPSELERILAEEWEEEEENENRC
        PCRPSELERILAEEW EEEE EN C
Subjt:  PCRPSELERILAEEWEEEEENENRC

A0A1S3CNL2 auxin-responsive protein SAUR32-like4.9e-5186.51Show/hide
Query:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTI
        KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D E+GDD  ST VPEDVKEGHFAVVAVDAEEPKRFVVPLSCL NPTFLRLLEAAAEEYGF+HEGALT+
Subjt:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTI

Query:  PCRPSELERILAEEW-EEEEENENRC
        PCRPSELERILAEEW EEEE+ EN C
Subjt:  PCRPSELERILAEEW-EEEEENENRC

A0A5D3DFC2 Auxin-responsive protein SAUR32-like4.9e-5186.51Show/hide
Query:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTI
        KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D E+GDD  ST VPEDVKEGHFAVVAVDAEEPKRFVVPLSCL NPTFLRLLEAAAEEYGF+HEGALT+
Subjt:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTI

Query:  PCRPSELERILAEEW-EEEEENENRC
        PCRPSELERILAEEW EEEE+ EN C
Subjt:  PCRPSELERILAEEW-EEEEENENRC

A0A6J1H360 auxin-responsive protein SAUR50-like6.8e-69100Show/hide
Query:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
        MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
Subjt:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD

Query:  HEGALTIPCRPSELERILAEEWEEEEENENRCF
        HEGALTIPCRPSELERILAEEWEEEEENENRCF
Subjt:  HEGALTIPCRPSELERILAEEWEEEEENENRCF

A0A6J1K3Y0 auxin-responsive protein SAUR50-like4.9e-6796.99Show/hide
Query:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
        MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFD E+GDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD
Subjt:  MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFD

Query:  HEGALTIPCRPSELERILAEEWEEEEENENRCF
        HEGALT+PCRPSELERILAEEWEEEEENENRCF
Subjt:  HEGALTIPCRPSELERILAEEWEEEEENENRCF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR364.5e-0935.96Show/hide
Query:  EASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEG
        +A +    + KLK+   RL++S        S     DH+  D    PVP     GH A+ V     +  R +VP+   N+P F  LL  A +EYGF HEG
Subjt:  EASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEG

Query:  ALTIPCRPSELERI
         +TIPC  S+ ER+
Subjt:  ALTIPCRPSELERI

O65695 Auxin-responsive protein SAUR508.2e-1142.53Show/hide
Query:  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPC
        L+R  SLG+++  G         D+D  P+  DV +GHF V     E   R++VP+S L +P F  LL+ A EE+GFDH+  LTIPC
Subjt:  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPC

P0DKL1 Auxin-responsive protein SAUR501.4e-1043.08Show/hide
Query:  DDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCR
        ++D + +P DV +GHF V     E   R++VP+SCL++PTF  LL+ + EE+GF+H+  + IPC+
Subjt:  DDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCR

P33079 Auxin-induced protein 10A52.9e-0845.45Show/hide
Query:  DVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHE-GALTIPCRPSELERILA
        DV +G+ AV   D  + +RF +P+S LN P+F  LL  A EE+G+DH  G LTIPC+  E   + A
Subjt:  DVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHE-GALTIPCRPSELERILA

Q9ZUZ3 Auxin-responsive protein SAUR321.5e-0943.28Show/hide
Query:  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILA
        +DV +G  A+ V    EE +RF+VP+   N+P F++LL+ A +EYGFD +G +TIPC   E   + A
Subjt:  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILA

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family6.4e-1141.38Show/hide
Query:  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPC
        L+R  SLG++ +S  ++     GD     +P DV +GHF V         R+V+P+S L  P F  LL+ A EE+GFDH   LTIPC
Subjt:  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPC

AT2G28085.1 SAUR-like auxin-responsive protein family4.3e-2350Show/hide
Query:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDA--EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALT
        K  GIVKLK  V RL +             E+  +        VP+DVKEGHFAV+AVD   E  +RFVVPL  L +P F +LLE A EEYGF H+GAL 
Subjt:  KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDA--EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALT

Query:  IPCRPSELERILAEEW
        +PCRPS L  IL E+W
Subjt:  IPCRPSELERILAEEW

AT2G46690.1 SAUR-like auxin-responsive protein family1.1e-1043.28Show/hide
Query:  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILA
        +DV +G  A+ V    EE +RF+VP+   N+P F++LL+ A +EYGFD +G +TIPC   E   + A
Subjt:  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILA

AT3G09870.1 SAUR-like auxin-responsive protein family4.2e-1855Show/hide
Query:  EFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERIL
        EF+ E   + ++ +P DVKEGH AV+AV  E  KRFV+ L  LN P FLRLLE A EE+GF   G LTIPC+P E+++IL
Subjt:  EFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERIL

AT4G34760.1 SAUR-like auxin-responsive protein family5.8e-1242.53Show/hide
Query:  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPC
        L+R  SLG+++  G         D+D  P+  DV +GHF V     E   R++VP+S L +P F  LL+ A EE+GFDH+  LTIPC
Subjt:  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGCCTGAGGCCAGTGTCAAGAAGAATGGCATTGTAAAGCTGAAGACCGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCT
ACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGAT
TTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTCTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACAATCCCGTGTCGA
CCGAGCGAGCTCGAGAGGATCTTGGCAGAGGAATGGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGCCTGAGGCCAGTGTCAAGAAGAATGGCATTGTAAAGCTGAAGACCGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCT
ACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGAT
TTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTCTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACAATCCCGTGTCGA
CCGAGCGAGCTCGAGAGGATCTTGGCAGAGGAATGGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTAA
Protein sequenceShow/hide protein sequence
MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCR
PSELERILAEEWEEEEENENRCF