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Carg02595 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02595
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationCarg_Chr02:7915446..7916036
RNA-Seq ExpressionCarg02595
SyntenyCarg02595
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]3.4e-0780.56Show/hide
Query:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        +FPGNGVWREGL+ MEE +LK MNEKWVLLHIE AE
Subjt:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0885.71Show/hide
Query:  FPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        FPGNGVW+EGL+GMEE SL+ MNEKWVLLHIEEAE
Subjt:  FPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2643.15Show/hide
Query:  MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLE--------------------------------------------------
        MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLE                                                  
Subjt:  MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLE--------------------------------------------------

Query:  --------------------------------------------------------------FPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
                                                                      FPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
Subjt:  --------------------------------------------------------------FPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
KAG7035975.1 hypothetical protein SDJN02_02775, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-41100Show/hide
Query:  MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
Subjt:  MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]2.9e-0675Show/hide
Query:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        +FPGNGVWR+GL+ M E +LK MNEKWVLLHIE AE
Subjt:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein1.4e-0675Show/hide
Query:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        +FPGNGVWR+GL+ M E +LK MNEKWVLLHIE AE
Subjt:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
A0A0A0LBY9 Uncharacterized protein3.6e-0777.78Show/hide
Query:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        +FPGNGVWR+GL+ MEE +LK MNEKWVLLHIE AE
Subjt:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like1.6e-0780.56Show/hide
Query:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
        +FPGNGVWREGL+ MEE +LK MNEKWVLLHIE AE
Subjt:  EFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCCCGCCGCTCGCCGCCGTCGACCGGAAACCGCGCCTCTTCCGACGCCGCTCCCGAACCCCTAACCCAATCCCAGAAAAATCAACTTCAAGTCCATTTCAC
CGACGAAGACGAACTCGATCTTCTCAATTGCTACCTCGAATTCCCGGGAAATGGAGTGTGGAGAGAGGGGCTGAAGGGAATGGAGGAGTGGAGTTTGAAAGGTATGAATG
AGAAGTGGGTTCTGTTACATATTGAAGAGGCAGAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCCCGCCGCTCGCCGCCGTCGACCGGAAACCGCGCCTCTTCCGACGCCGCTCCCGAACCCCTAACCCAATCCCAGAAAAATCAACTTCAAGTCCATTTCAC
CGACGAAGACGAACTCGATCTTCTCAATTGCTACCTCGAATTCCCGGGAAATGGAGTGTGGAGAGAGGGGCTGAAGGGAATGGAGGAGTGGAGTTTGAAAGGTATGAATG
AGAAGTGGGTTCTGTTACATATTGAAGAGGCAGAG
Protein sequenceShow/hide protein sequence
MSTPRRSPPSTGNRASSDAAPEPLTQSQKNQLQVHFTDEDELDLLNCYLEFPGNGVWREGLKGMEEWSLKGMNEKWVLLHIEEAE