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Carg02628 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02628
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflagellar radial spoke protein 5 isoform X1
Genome locationCarg_Chr02:7711190..7713071
RNA-Seq ExpressionCarg02628
SyntenyCarg02628
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035942.1 hypothetical protein SDJN02_02742, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-63100Show/hide
Query:  MYYGVEWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQLTKWVPPSVKMTISYVRAVKEQFRLPFHFLLVIHIGYIWDVVTYGTIMGGLL
        MYYGVEWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQLTKWVPPSVKMTISYVRAVKEQFRLPFHFLLVIHIGYIWDVVTYGTIMGGLL
Subjt:  MYYGVEWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQLTKWVPPSVKMTISYVRAVKEQFRLPFHFLLVIHIGYIWDVVTYGTIMGGLL

Query:  NDSFAGPSLNTPSLQNYKR
        NDSFAGPSLNTPSLQNYKR
Subjt:  NDSFAGPSLNTPSLQNYKR

KZV48121.1 hypothetical protein F511_28763 [Dorcoceras hygrometricum]3.0e-1735.07Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRAVKEQFR------
        +VLNG+WQ+SGG GRI+ D+ +EAML YADAGLSTFDMAD                              LTKWVPP VKMT SYVR   +  R      
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRAVKEQFR------

Query:  ----LPFHFLLVIHIGYI---------------------------------------------------WDVVTYGTIMGGLLNDS---------FAGPS
            L FH+    + GY+                                                     ++TYGT+MGGLL++          FAGP 
Subjt:  ----LPFHFLLVIHIGYI---------------------------------------------------WDVVTYGTIMGGLLNDS---------FAGPS

Query:  LNTPSLQNYKR
        LNTPSLQ YKR
Subjt:  LNTPSLQNYKR

MQM00517.1 hypothetical protein [Colocasia esculenta]1.3e-2044.85Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD-----------------------------QLTKWVPPSVKMTISYVRAVKEQFR------
        +V+NG+WQ+SGG GRID D+ VEAML YADAG STFDMAD                              LTKWVPP VKMT SYV    +  R      
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD-----------------------------QLTKWVPPSVKMTISYVRAVKEQFR------

Query:  ----LPFHF-----LLVIHIGYIWDVVTYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR
            L FH+     L   H     + V YGT+MGGLL+D          FAGP LNTPSLQ YKR
Subjt:  ----LPFHF-----LLVIHIGYIWDVVTYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR

PPR80401.1 hypothetical protein GOBAR_AA40314 [Gossypium barbadense]2.4e-1940.66Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD-----------------------------QLTKWVPPSVKMTISYVRA----------VK
        +V+NG+WQ+SGG GRID DN V+AMLRYADAGL+TFDMAD                              LTKWVPP VKMT  YVR           V 
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD-----------------------------QLTKWVPPSVKMTISYVRA----------VK

Query:  EQFRLPFHFLLVIHIGYIWDVV----------------------TYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR
            L FH+    + GY+ D +                       YGT+MGGLL++          FAGP LNTPSLQ YKR
Subjt:  EQFRLPFHFLLVIHIGYIWDVV----------------------TYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR

XP_020421689.1 L-glyceraldehyde 3-phosphate reductase isoform X3 [Prunus persica]1.3e-1737.2Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVR----------AVK
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR           V 
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVR----------AVK

Query:  EQFRLPFH----------------------FLLVIHIGYIWD-------------------------VVTYGTIMGGLLNDS---------FAGPSLNTP
            L FH                       +L   I  + +                         ++TYGT+MGGLL++          FAGP LNTP
Subjt:  EQFRLPFH----------------------FLLVIHIGYIWD-------------------------VVTYGTIMGGLLNDS---------FAGPSLNTP

Query:  SLQNYKR
        SLQ YKR
Subjt:  SLQNYKR

TrEMBL top hitse value%identityAlignment
A0A2P5VNI8 Uncharacterized protein1.2e-1940.66Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD-----------------------------QLTKWVPPSVKMTISYVRA----------VK
        +V+NG+WQ+SGG GRID DN V+AMLRYADAGL+TFDMAD                              LTKWVPP VKMT  YVR           V 
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMAD-----------------------------QLTKWVPPSVKMTISYVRA----------VK

Query:  EQFRLPFHFLLVIHIGYIWDVV----------------------TYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR
            L FH+    + GY+ D +                       YGT+MGGLL++          FAGP LNTPSLQ YKR
Subjt:  EQFRLPFHFLLVIHIGYIWDVV----------------------TYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR

A0A2Z7CLZ5 Aldo_ket_red domain-containing protein1.4e-1735.07Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRAVKEQFR------
        +VLNG+WQ+SGG GRI+ D+ +EAML YADAGLSTFDMAD                              LTKWVPP VKMT SYVR   +  R      
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRAVKEQFR------

Query:  ----LPFHFLLVIHIGYI---------------------------------------------------WDVVTYGTIMGGLLNDS---------FAGPS
            L FH+    + GY+                                                     ++TYGT+MGGLL++          FAGP 
Subjt:  ----LPFHFLLVIHIGYI---------------------------------------------------WDVVTYGTIMGGLLNDS---------FAGPS

Query:  LNTPSLQNYKR
        LNTPSLQ YKR
Subjt:  LNTPSLQNYKR

A0A314Z9P2 Flagellar radial spoke protein 5 isoform X12.4e-1734.38Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVR----------AVK
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR           V 
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVR----------AVK

Query:  EQFRLPFHFLLVIHIGYI----------------------------------------------------------------WDVVTYGTIMGGLLNDS-
            L FH+    + GY+                                                                  ++TYGT+MGGLL++  
Subjt:  EQFRLPFHFLLVIHIGYI----------------------------------------------------------------WDVVTYGTIMGGLLNDS-

Query:  --------FAGPSLNTPSLQNYKR
                FAGP LNTPSLQ YKR
Subjt:  --------FAGPSLNTPSLQNYKR

K3ZVK6 Uncharacterized protein2.8e-2146Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRAVKEQFRLPFHFL
        +VLNG+WQ+SGG GRID D  V+AML YADAGLSTFDMAD                              LTKWVPP VKMT SYV     + R      
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRAVKEQFRLPFHFL

Query:  LVIHIGYIWDVVTYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR
         +  + + W    YGT+MGGLL++          FAGP LNTPSLQ YKR
Subjt:  LVIHIGYIWDVVTYGTIMGGLLNDS---------FAGPSLNTPSLQNYKR

M5VYN0 Aldo_ket_red domain-containing protein2.4e-1734.38Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVR----------AVK
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWVPP VKMT SYVR           V 
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVR----------AVK

Query:  EQFRLPFHFLLVIHIGYI----------------------------------------------------------------WDVVTYGTIMGGLLNDS-
            L FH+    + GY+                                                                  ++TYGT+MGGLL++  
Subjt:  EQFRLPFHFLLVIHIGYI----------------------------------------------------------------WDVVTYGTIMGGLLNDS-

Query:  --------FAGPSLNTPSLQNYKR
                FAGP LNTPSLQ YKR
Subjt:  --------FAGPSLNTPSLQNYKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27680.1 NAD(P)-linked oxidoreductase superfamily protein4.4e-1932.14Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRA----------VK
        +VLNG+WQ+SGG G+ID ++ V++MLRYADAGLSTFDMAD                              LTKWVPP +KMT SYVR           V 
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ-----------------------------LTKWVPPSVKMTISYVRA----------VK

Query:  EQFRLPFHFLLVIHIGYI----------------------------------------------------------------WDVVTYGTIMGGLLNDS-
            L FH+    + GY+                                                                  ++TYGT+MGGLL++  
Subjt:  EQFRLPFHFLLVIHIGYI----------------------------------------------------------------WDVVTYGTIMGGLLNDS-

Query:  --------FAGPSLNTPSLQNYKR
                FAGP LNTPSLQ YKR
Subjt:  --------FAGPSLNTPSLQNYKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTACGGTGTCGAATGGCAAGTGCTCAACGGAATATGGCAGTCCAGCGGAGGAAGGGGGAGAATCGACTGTGACAATAGGGTGGAGGCTATGCTCCGATATGCCGA
CGCCGGACTTTCAACCTTCGACATGGCCGACCAGCTTACAAAATGGGTGCCACCGTCGGTGAAGATGACTATTAGCTATGTCCGGGCAGTCAAGGAGCAGTTCCGACTTC
CATTTCATTTTTTACTTGTCATACATATTGGATACATATGGGATGTTGTAACGTATGGAACTATAATGGGTGGCCTACTTAATGATTCCTTTGCTGGACCTTCATTAAAT
ACTCCCTCCCTACAAAACTACAAAAGG
mRNA sequenceShow/hide mRNA sequence
TTCTCTCAGGCGCAAATCTTCTCGTACTCAACAGCTAATGGCCATGGCAGCGATCAACGGAGCTTCTATAATCTCACCGCCTTCAAATCCTTCACGGCGGAGATAAGAAT
GCGCTATGAGTGGAGAAAACTTTGAGCTAACAACTAGGTTAGGTGCTCTCGGACATTGGAAGGGTCCACCCAATGTATTACGGTGTCGAATGGCAAGTGCTCAACGGAAT
ATGGCAGTCCAGCGGAGGAAGGGGGAGAATCGACTGTGACAATAGGGTGGAGGCTATGCTCCGATATGCCGACGCCGGACTTTCAACCTTCGACATGGCCGACCAGCTTA
CAAAATGGGTGCCACCGTCGGTGAAGATGACTATTAGCTATGTCCGGGCAGTCAAGGAGCAGTTCCGACTTCCATTTCATTTTTTACTTGTCATACATATTGGATACATA
TGGGATGTTGTAACGTATGGAACTATAATGGGTGGCCTACTTAATGATTCCTTTGCTGGACCTTCATTAAATACTCCCTCCCTACAAAACTACAAAAGG
Protein sequenceShow/hide protein sequence
MYYGVEWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQLTKWVPPSVKMTISYVRAVKEQFRLPFHFLLVIHIGYIWDVVTYGTIMGGLLNDSFAGPSLN
TPSLQNYKR