; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02650 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02650
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPoly(A)-specific ribonuclease
Genome locationCarg_Chr02:7617788..7618753
RNA-Seq ExpressionCarg02650
SyntenyCarg02650
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-187100Show/hide
Query:  MKNIELNTSTETSTSFPLHRLFLRHNPSPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR
        MKNIELNTSTETSTSFPLHRLFLRHNPSPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR
Subjt:  MKNIELNTSTETSTSFPLHRLFLRHNPSPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR

Query:  PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGL
        PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGL
Subjt:  PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGL

Query:  LCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRD
        LCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRD
Subjt:  LCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRD

Query:  VYFGKDGPEKHAGVLYGLEVY
        VYFGKDGPEKHAGVLYGLEVY
Subjt:  VYFGKDGPEKHAGVLYGLEVY

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]5.1e-157100Show/hide
Query:  MLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF
        MLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF
Subjt:  MLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF

Query:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
        NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
Subjt:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV

Query:  KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
Subjt:  KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]2.4e-17595.36Show/hide
Query:  MKNIELNTSTETSTSFPLHRLFLRHNP--SPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVV
        MKNIELNTS ET TSFPLHRLFLRHNP  SPHL         PLSVPRSS PKMLIQHLSSPIHVREVWDFNLHHEFRLIN LVDRYPFISMDTEFPGVV
Subjt:  MKNIELNTSTETSTSFPLHRLFLRHNP--SPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVV

Query:  VRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSS
        VRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSS
Subjt:  VRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSS

Query:  GLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM
        GLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM
Subjt:  GLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM

Query:  RDVYFGKDGPEKHAGVLYGLEVY
        RDVYFGKDGPEKHAGVLYGLEVY
Subjt:  RDVYFGKDGPEKHAGVLYGLEVY

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]2.4e-18399.07Show/hide
Query:  MKNIELNTSTETSTSFPLHRLFLRHNPSPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR
        MKNIELNTSTETSTSFPLHRLFLRHNP   LTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR
Subjt:  MKNIELNTSTETSTSFPLHRLFLRHNPSPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR

Query:  PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGL
        PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGL
Subjt:  PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGL

Query:  LCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRD
        LCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRD
Subjt:  LCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRD

Query:  VYFGKDGPEKHAGVLYGLEVY
        VYFGKDGPEKHAGVLYGLEVY
Subjt:  VYFGKDGPEKHAGVLYGLEVY

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]2.9e-12885.55Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPS--RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDV
        I +R+VWDFNL +EF LIN L  R+PFISMDTEFPGVV+RPA H    RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTD  FIWEFNFRDFDV
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPS--RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDV

Query:  TRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFC
         RDLHAPDSI+LLKRQGIDFERNR HGV S+RF+ELLMSSGLLCN SV+WVTFHSAYDFGYLVKILTR KLP+RL +FLKIL+  FGNKVYDVKHMMRFC
Subjt:  TRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFC

Query:  DSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        D LYGGL+RVAKTLAVDRAVGK HQAGSDSLLTW AFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  DSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

TrEMBL top hitse value%identityAlignment
A0A061GVA7 Poly(A)-specific ribonuclease7.5e-12277.12Show/hide
Query:  SSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSR-------PSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWE
        S P+ +REVW  NL  EF LI++++D YPFISMDTEFPG+V++P   PSR       PSDHY  LKSNVDALNLIQVGLTLSD+ GNLP LGTD +FIWE
Subjt:  SSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSR-------PSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWE

Query:  FNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYD
        FNF DFDV RD HAPDSI+LL+RQGIDFE+NR  G+DS RF+EL+MSSGL+CN SVSWVTFHSAYDFGYLVKILTRR+LP  LDEFL+IL+ FFGN+VYD
Subjt:  FNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYD

Query:  VKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        +KHMMRFC SLYGGL+RVA+TL V+RAVGKCHQAGSDSLLTWHAFQKMRDVYF KDGPEKHAGVLYGLEVY
Subjt:  VKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

A0A5C7IWS3 Poly(A)-specific ribonuclease7.5e-12278.15Show/hide
Query:  SPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPS-------RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF
        S I +REVWDFNL  EF LI +++D YPFISMDTEFPG++ RP  +P+       RPSDHY LLKSNVDALNLIQVGLTLSD+ GNLP LGT+ +FIW+F
Subjt:  SPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPS-------RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF

Query:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
        NFRDFDV  D HAPDSIDLL+RQGIDFERNR  GVDS RF+EL+MSSGL+CN SVSWVTFHSAYDFGYLVKILTR+ LPS LDEFL I + FFGNKVYDV
Subjt:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV

Query:  KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        KHMMRFC SL+GGL+RVA+TLAV+RAVGKCHQAGSDSLLTWHAFQKMRDVYF  DG EKHAGVLYGLEVY
Subjt:  KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

A0A5J5C461 Poly(A)-specific ribonuclease4.9e-12177.7Show/hide
Query:  PIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPS-------RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFN
        PI +REVW  NL  EF LI+ L+DRYP+ISMDTEFPGVV RPA  P+       RPSDHY +LKSNVDALNLIQ+GLTLSDA GNLP +GT  RFIWEFN
Subjt:  PIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPS-------RPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFN

Query:  FRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVK
        F DFDV RD+HAPDS++LLKRQGIDF+RNR  GVDSARF+EL+MSSGL+CN SVSWVTFHSAYDFGYLVKILTRR+LP+ L +FL +L+ FFGN+VYDVK
Subjt:  FRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVK

Query:  HMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        H+M+FC+SLYGGL+RVA+TL VDRAVGKCHQAGSDSLLTWHAFQKMRDVYF K+GPEKHAGVLYGLEVY
Subjt:  HMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

A0A6J1GZY2 Poly(A)-specific ribonuclease2.5e-157100Show/hide
Query:  MLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF
        MLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF
Subjt:  MLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEF

Query:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
        NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
Subjt:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV

Query:  KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
Subjt:  KHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

A0A6J1K4S7 Poly(A)-specific ribonuclease1.2e-17595.36Show/hide
Query:  MKNIELNTSTETSTSFPLHRLFLRHNP--SPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVV
        MKNIELNTS ET TSFPLHRLFLRHNP  SPHL         PLSVPRSS PKMLIQHLSSPIHVREVWDFNLHHEFRLIN LVDRYPFISMDTEFPGVV
Subjt:  MKNIELNTSTETSTSFPLHRLFLRHNP--SPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVV

Query:  VRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSS
        VRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSS
Subjt:  VRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSS

Query:  GLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM
        GLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM
Subjt:  GLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM

Query:  RDVYFGKDGPEKHAGVLYGLEVY
        RDVYFGKDGPEKHAGVLYGLEVY
Subjt:  RDVYFGKDGPEKHAGVLYGLEVY

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 117.1e-10971.59Show/hide
Query:  LSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR---PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDK--RFIWEF
        LS  I +R+VW +NL  EF LI  +V+ YPFISMDTEFPGV+ +          P+  Y LLKSNVDAL+LIQVGLTLSDADGNLP LG  K  R+IWEF
Subjt:  LSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR---PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDK--RFIWEF

Query:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
        NFRDFDV RD HAPDSI+LL+R GIDFERNR  GV+S RF+EL+MSSGL+CN SVSWVTFHSAYDFGYLVKILTRR+LP  L EFL +L+AFFG++VYDV
Subjt:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV

Query:  KHMMRFCDS-LYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        KH+MRFC+  LYGGL+RVA++L V+RAVGKCHQAGSDSLLTW AFQ+MRD+YF +DG EKHAGVLYGLEV+
Subjt:  KHMMRFCDS-LYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.0e-8055.17Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSD-HYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT
        I +REVWD+NL  EF LI  +VD++ +I+MDTEFPGVV++P       +D +Y  LK NVD L LIQVGLT SD +GNLPT GTDK  IW+FNFR+F++ 
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSD-HYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT

Query:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD
         D++A +SI+LL++ GIDF++N   G+D  RF EL+MSSG++ N ++SWVTFH  YDFGYLVK+LT ++LP +  +F K+L  +F   VYD+KH+M FC+
Subjt:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD

Query:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEV
         L+GGL R+A+ + V+R VG CHQAGSDSLLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 97.1e-10968.12Show/hide
Query:  KPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTD--KR
        KP   ++     +  REVW  NL  EF LI+ ++D YPFISMDTEFPGV+ +     + P D Y LLK+NVDAL+LIQVGLTLSD +GNLP LG D  + 
Subjt:  KPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTD--KR

Query:  FIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGN
        FIWEFNFRDFDV RD HAPDSI+LL+RQGIDFERN   GV+S RF+EL+MSSGL+CN  VSWVTFHSAYDFGYL+KILTRR+LP  L EF ++++  FG 
Subjt:  FIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGN

Query:  KVYDVKHMMRFCD-SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        +VYDVKHMM+FC+  L+GGL+RVA+TL V+RAVGKCHQAGSDSLLTWHAFQ+MRD+YF +DGPEKHAGVLYGLEV+
Subjt:  KVYDVKHMMRFCD-SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

Q9SAI2 Probable CCR4-associated factor 1 homolog 64.9e-7854.96Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT
        I +REVW+ NL  E  LI  +VD +P+++MDTEFPG+VVRP     S    HY  LK+NV+ L +IQ+GLT S+  GNLPT GTDK  IW+FNFR+FD+ 
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT

Query:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD
         D+ A DSI+LLK+ GID  +N   G+DS RF+ELLMSSG++ N +V WVTFHS YDFGYL+K+LT + LP    +F K++  +F   VYD+KH+M+FC+
Subjt:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD

Query:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGP-EKHAGVLYGLEV
        SL+GGL ++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F   GP  K++GVLYGL V
Subjt:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGP-EKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.4e-7753.82Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRF-IWEFNFRDFDV
        I +REVW+ NL  E  LI  +VD +PF++MDTEFPG+V RP     +    HY  LK+NV+ L +IQ+GLT SD  GNLPT GTD ++ IW+FNFR+FD+
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRF-IWEFNFRDFDV

Query:  TRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFC
          D++A DSI+LL++ GIDF +N   G+DS RF+ELLMSSG++ N +V WVTFHS YDFGYL+K+LT + LP     F +++  +F  +VYD+KH+M+FC
Subjt:  TRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFC

Query:  DSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEV
        +SL+GGL ++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F     EK++GVLYGL V
Subjt:  DSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.5e-7954.96Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT
        I +REVW+ NL  E  LI  +VD +P+++MDTEFPG+VVRP     S    HY  LK+NV+ L +IQ+GLT S+  GNLPT GTDK  IW+FNFR+FD+ 
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT

Query:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD
         D+ A DSI+LLK+ GID  +N   G+DS RF+ELLMSSG++ N +V WVTFHS YDFGYL+K+LT + LP    +F K++  +F   VYD+KH+M+FC+
Subjt:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD

Query:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGP-EKHAGVLYGLEV
        SL+GGL ++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F   GP  K++GVLYGL V
Subjt:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGP-EKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.5e-7954.96Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT
        I +REVW+ NL  E  LI  +VD +P+++MDTEFPG+VVRP     S    HY  LK+NV+ L +IQ+GLT S+  GNLPT GTDK  IW+FNFR+FD+ 
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRP-AFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT

Query:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD
         D+ A DSI+LLK+ GID  +N   G+DS RF+ELLMSSG++ N +V WVTFHS YDFGYL+K+LT + LP    +F K++  +F   VYD+KH+M+FC+
Subjt:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD

Query:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGP-EKHAGVLYGLEV
        SL+GGL ++A+ L V+R VG CHQAGSDSLLT   F+K+++ +F   GP  K++GVLYGL V
Subjt:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGP-EKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-11068.12Show/hide
Query:  KPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTD--KR
        KP   ++     +  REVW  NL  EF LI+ ++D YPFISMDTEFPGV+ +     + P D Y LLK+NVDAL+LIQVGLTLSD +GNLP LG D  + 
Subjt:  KPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTD--KR

Query:  FIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGN
        FIWEFNFRDFDV RD HAPDSI+LL+RQGIDFERN   GV+S RF+EL+MSSGL+CN  VSWVTFHSAYDFGYL+KILTRR+LP  L EF ++++  FG 
Subjt:  FIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGN

Query:  KVYDVKHMMRFCD-SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        +VYDVKHMM+FC+  L+GGL+RVA+TL V+RAVGKCHQAGSDSLLTWHAFQ+MRD+YF +DGPEKHAGVLYGLEV+
Subjt:  KVYDVKHMMRFCD-SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-8155.17Show/hide
Query:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSD-HYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT
        I +REVWD+NL  EF LI  +VD++ +I+MDTEFPGVV++P       +D +Y  LK NVD L LIQVGLT SD +GNLPT GTDK  IW+FNFR+F++ 
Subjt:  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSD-HYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVT

Query:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD
         D++A +SI+LL++ GIDF++N   G+D  RF EL+MSSG++ N ++SWVTFH  YDFGYLVK+LT ++LP +  +F K+L  +F   VYD+KH+M FC+
Subjt:  RDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCD

Query:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEV
         L+GGL R+A+ + V+R VG CHQAGSDSLLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  SLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEV

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-11071.59Show/hide
Query:  LSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR---PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDK--RFIWEF
        LS  I +R+VW +NL  EF LI  +V+ YPFISMDTEFPGV+ +          P+  Y LLKSNVDAL+LIQVGLTLSDADGNLP LG  K  R+IWEF
Subjt:  LSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVR---PAFHPSRPSDHYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDK--RFIWEF

Query:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV
        NFRDFDV RD HAPDSI+LL+R GIDFERNR  GV+S RF+EL+MSSGL+CN SVSWVTFHSAYDFGYLVKILTRR+LP  L EFL +L+AFFG++VYDV
Subjt:  NFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLKILKAFFGNKVYDV

Query:  KHMMRFCDS-LYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY
        KH+MRFC+  LYGGL+RVA++L V+RAVGKCHQAGSDSLLTW AFQ+MRD+YF +DG EKHAGVLYGLEV+
Subjt:  KHMMRFCDS-LYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACATTGAATTGAACACTTCCACTGAAACTTCCACCTCTTTCCCACTACACCGTCTTTTTCTTCGCCATAACCCCTCACCTCACCTCACCTCACCTCAATCCCT
CCTTTATAACCCACTTTCGGTTCCCCGATCTTCCAAGCCCAAAATGTTAATCCAGCATCTCTCTTCCCCCATCCATGTCCGCGAGGTCTGGGACTTCAATCTCCACCACG
AATTCCGTCTCATCAACCGCCTTGTTGATCGCTACCCTTTCATTTCCATGGACACTGAGTTTCCCGGCGTCGTCGTCCGCCCTGCCTTCCACCCATCTCGCCCCTCCGAT
CATTACCTTCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAAGTCGGTCTCACCCTCTCCGACGCCGACGGCAACCTTCCTACTCTCGGTACCGACAAGAGATT
CATTTGGGAGTTCAATTTCAGGGATTTTGACGTTACCCGTGACCTCCACGCGCCTGATTCCATCGACCTCTTGAAACGCCAGGGCATCGACTTCGAACGCAACAGAGCTC
ACGGGGTTGACTCGGCACGATTCTCCGAGTTGCTCATGTCATCCGGTCTGCTCTGTAATCCCTCTGTCAGTTGGGTCACCTTCCATAGTGCCTATGACTTCGGCTACTTG
GTCAAGATCCTCACTCGCCGGAAGCTTCCTAGCCGCCTCGACGAGTTCTTGAAGATTCTCAAGGCTTTCTTTGGGAACAAGGTTTATGATGTCAAGCACATGATGCGGTT
CTGTGATAGCCTCTACGGCGGGTTGGAGCGTGTGGCTAAGACTCTAGCGGTGGACAGGGCGGTGGGAAAGTGCCACCAGGCTGGTTCTGATAGCCTGCTAACATGGCATG
CCTTTCAGAAAATGAGGGATGTGTACTTTGGAAAGGATGGGCCGGAGAAGCACGCCGGCGTTTTGTACGGATTAGAAGTATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACATTGAATTGAACACTTCCACTGAAACTTCCACCTCTTTCCCACTACACCGTCTTTTTCTTCGCCATAACCCCTCACCTCACCTCACCTCACCTCAATCCCT
CCTTTATAACCCACTTTCGGTTCCCCGATCTTCCAAGCCCAAAATGTTAATCCAGCATCTCTCTTCCCCCATCCATGTCCGCGAGGTCTGGGACTTCAATCTCCACCACG
AATTCCGTCTCATCAACCGCCTTGTTGATCGCTACCCTTTCATTTCCATGGACACTGAGTTTCCCGGCGTCGTCGTCCGCCCTGCCTTCCACCCATCTCGCCCCTCCGAT
CATTACCTTCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAAGTCGGTCTCACCCTCTCCGACGCCGACGGCAACCTTCCTACTCTCGGTACCGACAAGAGATT
CATTTGGGAGTTCAATTTCAGGGATTTTGACGTTACCCGTGACCTCCACGCGCCTGATTCCATCGACCTCTTGAAACGCCAGGGCATCGACTTCGAACGCAACAGAGCTC
ACGGGGTTGACTCGGCACGATTCTCCGAGTTGCTCATGTCATCCGGTCTGCTCTGTAATCCCTCTGTCAGTTGGGTCACCTTCCATAGTGCCTATGACTTCGGCTACTTG
GTCAAGATCCTCACTCGCCGGAAGCTTCCTAGCCGCCTCGACGAGTTCTTGAAGATTCTCAAGGCTTTCTTTGGGAACAAGGTTTATGATGTCAAGCACATGATGCGGTT
CTGTGATAGCCTCTACGGCGGGTTGGAGCGTGTGGCTAAGACTCTAGCGGTGGACAGGGCGGTGGGAAAGTGCCACCAGGCTGGTTCTGATAGCCTGCTAACATGGCATG
CCTTTCAGAAAATGAGGGATGTGTACTTTGGAAAGGATGGGCCGGAGAAGCACGCCGGCGTTTTGTACGGATTAGAAGTATATTGA
Protein sequenceShow/hide protein sequence
MKNIELNTSTETSTSFPLHRLFLRHNPSPHLTSPQSLLYNPLSVPRSSKPKMLIQHLSSPIHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAFHPSRPSD
HYLLLKSNVDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDFERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYL
VKILTRRKLPSRLDEFLKILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKMRDVYFGKDGPEKHAGVLYGLEVY