; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02664 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02664
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionReplication factor C subunit 1
Genome locationCarg_Chr02:7526317..7530080
RNA-Seq ExpressionCarg02664
SyntenyCarg02664
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005663 - DNA replication factor C complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003689 - DNA clamp loader activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR001357 - BRCT domain
IPR003959 - ATPase, AAA-type, core
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036420 - BRCT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605957.1 Replication factor C subunit 1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-23599.77Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVP LQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

KAG7035907.1 Replication factor C subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-240100Show/hide
Query:  MELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLK
        MELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLK
Subjt:  MELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLK

Query:  SGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
        SGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Subjt:  SGSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER

Query:  EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGA
        EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGA
Subjt:  EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGA

Query:  SPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVN
        SPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVN
Subjt:  SPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVN

Query:  ASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQLVCIS
        ASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQLVCIS
Subjt:  ASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQLVCIS

XP_022957868.1 replication factor C subunit 1 isoform X1 [Cucurbita moschata]2.1e-23399.32Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKR+SQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

XP_022957869.1 replication factor C subunit 1 isoform X2 [Cucurbita moschata]2.1e-23399.32Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKR+SQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

XP_022995017.1 replication factor C subunit 1 isoform X1 [Cucurbita maxima]2.3e-23299.09Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGG STGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNAN+IKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

TrEMBL top hitse value%identityAlignment
A0A6J1DHR4 Replication factor C subunit 11.9e-20388.89Show/hide
Query:  LSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSG
        LSGG STGRRITSKYFASEKQKSKD  E E LPIKRKSPQDAKESPAKR+SQKDS+ES K P  +KLNK DDN  DDD V+SSSRKNLSDVTPNKKLKSG
Subjt:  LSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSG

Query:  SGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREE
        SGKGITQKPV+IEESDDEEA+GTESS K PSGRGRG RGSSAATV GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREE
Subjt:  SGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREE

Query:  AEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSA
        AEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFD+IRAS  TKAPPRQ+SKKSVVKS+ESPT K+S K   VQAKT KD +A
Subjt:  AEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG-TKAPPRQDSKKSVVKSVESPTGKSSLK---VQAKTCKDLSA

Query:  GASPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIE
        GASPAKQK RTVEFSSLTWTEKY+PKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKKGKKLNDS AKKA+LLCGGPGIGKTTSAKLVSQMLGY+AIE
Subjt:  GASPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIE

Query:  VNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        VNASDNRGKSDAKIQKGISGSNAN+IKELISN SLHFRT+Q
Subjt:  VNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

A0A6J1H1H3 Replication factor C subunit 11.0e-23399.32Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKR+SQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

A0A6J1H397 Replication factor C subunit 11.0e-23399.32Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKR+SQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

A0A6J1JXK0 Replication factor C subunit 11.1e-23299.09Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGG STGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNAN+IKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

A0A6J1K6Q0 Replication factor C subunit 11.1e-23299.09Show/hide
Query:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS
        ELSGG STGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVP LQKLNKIDDN DDDDAVISSSRKNLSDVTPNKKLKS
Subjt:  ELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
        GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
Subjt:  GSGKGITQKPVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE

Query:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
        EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS
Subjt:  EAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGAS

Query:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
        PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA
Subjt:  PAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNA

Query:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        SDNRGKSDAKIQKGISGSNAN+IKELISNSSLHFRTDQ
Subjt:  SDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQ

SwissProt top hitse value%identityAlignment
P35251 Replication factor C subunit 11.9e-3531.21Show/hide
Query:  GSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVI-----SSSRKNLSDVTPNKKLKS
        G T   + +    +EK K     +T ++  +RKS    K+S  K  S K+S++  K     K+ ++          I      SS K +  V   +K  +
Subjt:  GSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVI-----SSSRKNLSDVTPNKKLKS

Query:  GSGKGITQKPVKIEESD-DEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
           KG T+ P K + S   +E+   E S K+ +                         + ++  R+ P   G KE+P+GA +CL GL FVI+G L+S+ER
Subjt:  GSGKGITQKPVKIEESD-DEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER

Query:  EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIR-----------ASGTKAPPRQDSKKSVVKSVE-----SPTGKS
        +EA+ LI+R+GG++TG++SKKTNYL+   D G  KS KA  LGT  + EDGL ++IR           A  T+       +++  K+V+     SP+ K 
Subjt:  EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIR-----------ASGTKAPPRQDSKKSVVKSVE-----SPTGKS

Query:  SLKVQ----------AKTCK--------------DLSAGASPAKQKRRTVEFSS------LTWTEKYKPKVPNDII---GNQSLVKQLHDWLAHWNENFL
        S   +          AKT K               ++   S   + R   + SS      L W +KYKP     II   G+QS   +L  WL +W ++  
Subjt:  SLKVQ----------AKTCK--------------DLSAGASPAKQKRRTVEFSS------LTWTEKYKPKVPNDII---GNQSLVKQLHDWLAHWNENFL

Query:  DGGSKKKGKKL------NDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSS
            KK   K       +D  + KA LL G PG+GKTT+A LV Q LGY  +E+NASD R KS  K     S +N  +IK   SN +
Subjt:  DGGSKKKGKKL------NDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSS

P35600 Replication factor C subunit 15.3e-3028.86Show/hide
Query:  TGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKE---------SLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKL
        T +R  SK  +SE      T E    PI +K+    K + +K +   D  E          +  P  + + + ++ D D   +     +++ +  P KK+
Subjt:  TGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKE---------SLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKL

Query:  KSGSGKGITQKPVKIEESDDEEAEGTESSRKQP---SGRGRGGRGSSAATVGGRGRGGGRGG--FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGT
         S +    + K  K    +  + + T+S    P     +      SS  T   R          +  +  R    + G KE+P+G+PDCL+GLTFV++G 
Subjt:  KSGSGKGITQKPVKIEESDDEEAEGTESSRKQP---SGRGRGGRGSSAATVGGRGRGGGRGG--FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGT

Query:  LDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVES-PTGKSSLK------
        L+S+EREEAE +IK +GG++   + KK  YL+  E+ G +K + A+EL    L+EDGLFD+IR     A   ++ KKS  K   S   GK  +K      
Subjt:  LDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVES-PTGKSSLK------

Query:  ---------------------------VQAKTCKD---------LSAGASPAKQKR----------RTVEFSSLTWTEKYKPKVPNDIIGN---QSLVKQ
                                      K  KD         L     P+ QK           +T++   + W +K+KP    +I+G     S V +
Subjt:  ---------------------------VQAKTCKD---------LSAGASPAKQKR----------RTVEFSSLTWTEKYKPKVPNDIIGN---QSLVKQ

Query:  LHDWLAHWNENFLDGGSKKK----GKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSL
        L +WL+ W  N  DG  K +      K +D    KA LL G PGIGKTT+A LV + LG++A+E NASD R K   K          + +  L+SN SL
Subjt:  LHDWLAHWNENFLDGGSKKK----GKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSL

P35601 Replication factor C subunit 11.6e-3931.6Show/hide
Query:  SEKQKSKDTTETEELPIKRKSP---------QDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK
        +EKQKS +  E      K  SP         +DAK+ P K   +K++  S K      L K  +    ++  + ++R+  S   P        G+  T K
Subjt:  SEKQKSKDTTETEELPIKRKSP---------QDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK

Query:  PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH
          K+  +  E     +S +K+ + +                       + ++  R+ P   G KE+P+GA +CL GLTFVI+G L+S+ER+EA+ LI+R+
Subjt:  PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH

Query:  GGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTK-------APPRQDSKKSVVKSVESPTGKSSLKV-------QAKTCKDL
        GG++TG++SKKTNYL+   D G  KS KA  LGT  L EDGL D+IR    K       A      +KS ++       +   K+       ++K CK  
Subjt:  GGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTK-------APPRQDSKKSVVKSVESPTGKSSLKV-------QAKTCKDL

Query:  SAGASPAKQ-------------------KRRTVEFSSLTWTEKYKPKVPNDII---GNQSLVKQLHDWLAHWNENFLDGGSKKKGKKL------NDSGAK
            SP K                     R + +   L W +KYKP    +II   G+QS   +L  WL +W+++  +   KK   K       +D  + 
Subjt:  SAGASPAKQ-------------------KRRTVEFSSLTWTEKYKPKVPNDII---GNQSLVKQLHDWLAHWNENFLDGGSKKKGKKL------NDSGAK

Query:  KAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAK
        KA LL G PG+GKTT+A LV Q LGY  +E+NASD R K+  K
Subjt:  KAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAK

Q2R2B4 Replication factor C subunit 13.6e-11151.84Show/hide
Query:  TGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKE---SLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGS--
        + RR TSKYFAS+ +K +DT+          + +       KR+ QK S E    +K    ++++K +++DDDDD V  S RK      P+KKLK  S  
Subjt:  TGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKE---SLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGS--

Query:  -GKGITQKPVKIEESDDEEA----EGTESSRKQPSGRGRGGRGSSAA---------------------------------TVGGRGRGGGRGGFMNFGER
           G T      E+  DE+A    + + S R +  GRGRGGRG+ AA                                   GGRGRGGG  GFMNFGER
Subjt:  -GKGITQKPVKIEESDDEEA----EGTESSRKQPSGRGRGGRGSSAA---------------------------------TVGGRGRGGGRGGFMNFGER

Query:  KDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS--GTKA
        KDPPHKGEKEVPEGAPDCL GLTFVISGTLDSLEREEA DLIKR+GGR+TGSISKKTNYLL DED+GG KS+KAKELG  FLTEDGLFD+IR S      
Subjt:  KDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRAS--GTKA

Query:  PPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAG-----------ASPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLD
          +  S K+  K  +SP   S +KV+ +    ++ G           AS   QK   V+  SL WTEKY+PKVPNDI+GNQS+VKQLHDWL  W + FL 
Subjt:  PPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAG-----------ASPAKQKRRTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLD

Query:  GGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQL
         G K KGKK  DSGAKKA+LL G PGIGKTT+AK+VSQMLG +AIEVNASD+RGK+D+KI+KG+ GS +N+IKELISN++L++  ++L
Subjt:  GGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQL

Q9C587 Replication factor C subunit 11.8e-12660.42Show/hide
Query:  RRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK
        RR TSKYF  +K K KD  E E +P KRK               K   + L  P  +K+ K+ D DDDDD  +  SRK   D TP+KKLKSGSG+GI  K
Subjt:  RRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK

Query:  PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH
         V  +  DD++ E  E+  K  +GRGRGGR +  A+ GGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG PDCLAGLTFVISGTLDSLEREEAEDLIKRH
Subjt:  PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH

Query:  GGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG--TKAPPRQDSKKSVVKSVESPTGKSSLKVQAK-TCKDLSAGASPAKQKR
        GGRITGS+SKKT YLLCDEDIGGRKS KAKELGT FLTEDGLFDIIR+S    K+ P + +K +        T     + + K   K       PAK K 
Subjt:  GGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG--TKAPPRQDSKKSVVKSVESPTGKSSLKVQAK-TCKDLSAGASPAKQKR

Query:  RTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGK
        + +E +SL WTEKY+PKVPN+I+GNQSLV QLH+WL+HW++ F   GSK KGKKLND+G+KKA+LL G PGIGKTTSAKLVSQMLG++A+EVNASD+RGK
Subjt:  RTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGK

Query:  SDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        +++ I KGI GSNAN++KEL++N ++    D+
Subjt:  SDAKIQKGISGSNANTIKELISNSSLHFRTDQ

Arabidopsis top hitse value%identityAlignment
AT1G04730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.9e-0647.06Show/hide
Query:  KGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKS
        K  KL     +K +LLCG PG+GKTT A + ++  GY  +E+NASD R  S
Subjt:  KGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKS

AT1G63160.1 replication factor C 22.3e-0432.63Show/hide
Query:  WTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTS-AKLVSQMLGYE----AIEVNASDNRG
        W EKY+P    DI+GN+  V +L                    + +   G    ++L G PG GKTTS   L  ++LG       +E+NASD+RG
Subjt:  WTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTS-AKLVSQMLGYE----AIEVNASDNRG

AT5G22010.1 replication factor C11.3e-12760.42Show/hide
Query:  RRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK
        RR TSKYF  +K K KD  E E +P KRK               K   + L  P  +K+ K+ D DDDDD  +  SRK   D TP+KKLKSGSG+GI  K
Subjt:  RRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK

Query:  PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH
         V  +  DD++ E  E+  K  +GRGRGGR +  A+ GGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG PDCLAGLTFVISGTLDSLEREEAEDLIKRH
Subjt:  PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH

Query:  GGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG--TKAPPRQDSKKSVVKSVESPTGKSSLKVQAK-TCKDLSAGASPAKQKR
        GGRITGS+SKKT YLLCDEDIGGRKS KAKELGT FLTEDGLFDIIR+S    K+ P + +K +        T     + + K   K       PAK K 
Subjt:  GGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASG--TKAPPRQDSKKSVVKSVESPTGKSSLKVQAK-TCKDLSAGASPAKQKR

Query:  RTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGK
        + +E +SL WTEKY+PKVPN+I+GNQSLV QLH+WL+HW++ F   GSK KGKKLND+G+KKA+LL G PGIGKTTSAKLVSQMLG++A+EVNASD+RGK
Subjt:  RTVEFSSLTWTEKYKPKVPNDIIGNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGK

Query:  SDAKIQKGISGSNANTIKELISNSSLHFRTDQ
        +++ I KGI GSNAN++KEL++N ++    D+
Subjt:  SDAKIQKGISGSNANTIKELISNSSLHFRTDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAAGTGGTGGGGGAAGTACTGGCAGAAGGATAACTAGCAAGTATTTTGCCTCAGAAAAGCAGAAGTCTAAGGATACAACAGAAACAGAGGAACTCCCGATCAA
ACGAAAGTCTCCACAGGATGCTAAGGAGTCACCAGCCAAAAGAAGGTCCCAAAAGGATAGTAAGGAATCATTGAAAGTTCCAGGCCTACAAAAATTAAACAAAATTGATG
ACAATGATGATGATGATGATGCTGTTATTTCAAGTTCTAGAAAGAACTTGTCTGATGTCACTCCCAATAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAA
CCGGTAAAAATTGAAGAGAGTGATGATGAGGAAGCTGAGGGCACTGAGTCTTCTCGGAAGCAGCCTAGTGGAAGGGGTAGGGGGGGAAGAGGTTCATCTGCTGCAACCGT
TGGTGGTAGAGGCAGAGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCAGAAGGAGCTCCTGACTGTT
TAGCCGGTTTAACTTTTGTAATCAGTGGAACCCTTGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGTAGAATAACTGGATCCATCAGCAAA
AAAACAAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCTTCCAAAGCAAAAGAGCTGGGAACTGCTTTTCTCACTGAGGATGGCTTATTTGACATTATCCG
TGCATCAGGCACAAAAGCTCCTCCAAGGCAAGATTCTAAAAAATCTGTGGTCAAGTCCGTGGAATCTCCAACTGGGAAAAGTTCCCTGAAAGTACAAGCAAAGACATGCA
AAGATTTGTCTGCTGGTGCTTCACCTGCTAAGCAAAAACGCCGAACAGTTGAATTTTCTTCCCTAACATGGACAGAAAAATATAAGCCAAAGGTTCCAAATGACATTATA
GGGAATCAGTCGCTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAGAACTTCCTTGATGGTGGAAGCAAAAAGAAGGGTAAAAAGCTCAATGATTCTGGTGC
CAAAAAAGCAATCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTCAGCCAGATGCTTGGTTACGAGGCTATAGAGGTAAATGCCAGTGACA
ATCGGGGTAAATCAGATGCAAAAATTCAGAAGGGAATCAGCGGAAGCAATGCAAATACTATAAAGGAGCTTATCAGCAATTCATCTTTGCATTTCAGAACGGATCAGTTA
GTTTGCATTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTAAGTGGTGGGGGAAGTACTGGCAGAAGGATAACTAGCAAGTATTTTGCCTCAGAAAAGCAGAAGTCTAAGGATACAACAGAAACAGAGGAACTCCCGATCAA
ACGAAAGTCTCCACAGGATGCTAAGGAGTCACCAGCCAAAAGAAGGTCCCAAAAGGATAGTAAGGAATCATTGAAAGTTCCAGGCCTACAAAAATTAAACAAAATTGATG
ACAATGATGATGATGATGATGCTGTTATTTCAAGTTCTAGAAAGAACTTGTCTGATGTCACTCCCAATAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAA
CCGGTAAAAATTGAAGAGAGTGATGATGAGGAAGCTGAGGGCACTGAGTCTTCTCGGAAGCAGCCTAGTGGAAGGGGTAGGGGGGGAAGAGGTTCATCTGCTGCAACCGT
TGGTGGTAGAGGCAGAGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCAGAAGGAGCTCCTGACTGTT
TAGCCGGTTTAACTTTTGTAATCAGTGGAACCCTTGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGTAGAATAACTGGATCCATCAGCAAA
AAAACAAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCTTCCAAAGCAAAAGAGCTGGGAACTGCTTTTCTCACTGAGGATGGCTTATTTGACATTATCCG
TGCATCAGGCACAAAAGCTCCTCCAAGGCAAGATTCTAAAAAATCTGTGGTCAAGTCCGTGGAATCTCCAACTGGGAAAAGTTCCCTGAAAGTACAAGCAAAGACATGCA
AAGATTTGTCTGCTGGTGCTTCACCTGCTAAGCAAAAACGCCGAACAGTTGAATTTTCTTCCCTAACATGGACAGAAAAATATAAGCCAAAGGTTCCAAATGACATTATA
GGGAATCAGTCGCTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAGAACTTCCTTGATGGTGGAAGCAAAAAGAAGGGTAAAAAGCTCAATGATTCTGGTGC
CAAAAAAGCAATCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTCAGCCAGATGCTTGGTTACGAGGCTATAGAGGTAAATGCCAGTGACA
ATCGGGGTAAATCAGATGCAAAAATTCAGAAGGGAATCAGCGGAAGCAATGCAAATACTATAAAGGAGCTTATCAGCAATTCATCTTTGCATTTCAGAACGGATCAGTTA
GTTTGCATTTCCTGA
Protein sequenceShow/hide protein sequence
MELSGGGSTGRRITSKYFASEKQKSKDTTETEELPIKRKSPQDAKESPAKRRSQKDSKESLKVPGLQKLNKIDDNDDDDDAVISSSRKNLSDVTPNKKLKSGSGKGITQK
PVKIEESDDEEAEGTESSRKQPSGRGRGGRGSSAATVGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSISK
KTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDIIRASGTKAPPRQDSKKSVVKSVESPTGKSSLKVQAKTCKDLSAGASPAKQKRRTVEFSSLTWTEKYKPKVPNDII
GNQSLVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKAILLCGGPGIGKTTSAKLVSQMLGYEAIEVNASDNRGKSDAKIQKGISGSNANTIKELISNSSLHFRTDQL
VCIS