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Carg02681 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02681
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCarg_Chr02:7438699..7440016
RNA-Seq ExpressionCarg02681
SyntenyCarg02681
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605945.1 hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia]2.6e-64100Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL
        MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL

Query:  RPHQHDPVVPQKKKKILTYINCCIRP
        RPHQHDPVVPQKKKKILTYINCCIRP
Subjt:  RPHQHDPVVPQKKKKILTYINCCIRP

XP_022985819.1 dendritic arbor reduction protein 1 isoform X1 [Cucurbita maxima]5.9e-3266.67Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL
        MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+E+MA+ADKH R   HHH R H H  HH R  HHP   H  
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL

Query:  RPHQHDPVVPQKKKKILTYINCCIRP
        +      VV QKKKKIL+ ++CCI+P
Subjt:  RPHQHDPVVPQKKKKILTYINCCIRP

XP_022985820.1 dendritic arbor reduction protein 1 isoform X2 [Cucurbita maxima]3.8e-3166.67Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL
        MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+E+MA+ADKH R   HHH R H H  HH R  HHP   H  
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL

Query:  RPHQHDPVVPQKKKKILTYINCCIRP
         P   D  V  KKKKIL+ ++CCI+P
Subjt:  RPHQHDPVVPQKKKKILTYINCCIRP

XP_038901151.1 lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida]1.2e-3770.31Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHN--SHHSRYEHHPQYQH
        M  R EK NRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKR SLGNERE+MA   K  R Q HHHHRHH H+   H  +++H   + H
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHN--SHHSRYEHHPQYQH

Query:  RLRPHQHDPVVPQKKKKILTYINCCIRP
        R +P   D VVPQKKKKILTYINCCIRP
Subjt:  RLRPHQHDPVVPQKKKKILTYINCCIRP

XP_038901152.1 lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida]1.1e-3569.53Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHN--SHHSRYEHHPQYQH
        M  R EK NRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKR SLGNERE+MA   K  R Q HHHHRHH H+   H  +++H   + H
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHN--SHHSRYEHHPQYQH

Query:  RLRPHQHDPVVPQKKKKILTYINCCIRP
        R +P   D VVP KKKKILTYINCCIRP
Subjt:  RLRPHQHDPVVPQKKKKILTYINCCIRP

TrEMBL top hitse value%identityAlignment
A0A0A0KK09 AvrRpt-cleavage domain-containing protein1.1e-3665.12Show/hide
Query:  EKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQH
        ++NNRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+ SLGNE+E+M   DKH R Q H HHRH   + HH  ++H   ++H+   HQH
Subjt:  EKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQH

Query:  --------DPVVPQKKKKILTYINCCIRP
                D V P+KKKKILTYINCCIRP
Subjt:  --------DPVVPQKKKKILTYINCCIRP

A0A6J1FT95 dendritic arbor reduction protein 1 isoform X13.5e-3065.35Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRH-HSHNSHHSRYEHHPQYQHR
        MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+E+MA+ADKH R   HH HRH H H   H    HHP   H 
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRH-HSHNSHHSRYEHHPQYQHR

Query:  LRPHQHDPVVPQKKKKILTYINCCIRP
         +      VV QKKKKIL+ ++CCI+P
Subjt:  LRPHQHDPVVPQKKKKILTYINCCIRP

A0A6J1FX29 dendritic arbor reduction protein 1 isoform X22.9e-2963.85Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRH-HSHNSHHSRYEHHPQYQHR
        MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+E+MA+ADKH R   HH HRH H H   H    HHP     
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRH-HSHNSHHSRYEHHPQYQHR

Query:  LRPHQHDPV---VPQKKKKILTYINCCIRP
           H   PV   V  KKKKIL+ ++CCI+P
Subjt:  LRPHQHDPV---VPQKKKKILTYINCCIRP

A0A6J1JCC4 dendritic arbor reduction protein 1 isoform X21.8e-3166.67Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL
        MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+E+MA+ADKH R   HHH R H H  HH R  HHP   H  
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL

Query:  RPHQHDPVVPQKKKKILTYINCCIRP
         P   D  V  KKKKIL+ ++CCI+P
Subjt:  RPHQHDPVVPQKKKKILTYINCCIRP

A0A6J1JEB9 dendritic arbor reduction protein 1 isoform X12.8e-3266.67Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL
        MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+E+MA+ADKH R   HHH R H H  HH R  HHP   H  
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRL

Query:  RPHQHDPVVPQKKKKILTYINCCIRP
        +      VV QKKKKIL+ ++CCI+P
Subjt:  RPHQHDPVVPQKKKKILTYINCCIRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown3.5e-0633.08Show/hide
Query:  DTRAEKNNRWKSVPEFGGWDHNAPGA-SNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMM-----AMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQ
        D R EKN  W SVP+FG WD    G   +YS+ F++ R  RKQ K D +   RASLGNE E++     A +   L      + R  S + HH        
Subjt:  DTRAEKNNRWKSVPEFGGWDHNAPGA-SNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMM-----AMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQ

Query:  YQHRLRPHQHDPVVPQKKKKILTYINCCIR
             +PH      P  ++ + +  NCC++
Subjt:  YQHRLRPHQHDPVVPQKKKKILTYINCCIR

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein3.3e-1745.67Show/hide
Query:  MDTRAEKNNRWKSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHR
        MD R E N  W  VP+FGGWD   P  A+NYSVVFS+ARANRKQ K  +   + +SLG+E+E+M    ++ +Q    HHRH + +               
Subjt:  MDTRAEKNNRWKSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHR

Query:  LRPHQHDPVVPQKKKKILTYINCCIRP
              DPV+  KKK+ILTYINCCIRP
Subjt:  LRPHQHDPVVPQKKKKILTYINCCIRP

AT5G64850.1 FUNCTIONS IN: molecular_function unknown2.9e-0532.28Show/hide
Query:  DTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHR---HHSHNSHHSRYEHHPQYQH
        D +  KN+ W SVP+FG WD    G+ +YS+ FS+ R  RK  K D +   RASLGNE E++               +    HS N++ + + HH     
Subjt:  DTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHR---HHSHNSHHSRYEHHPQYQH

Query:  RLRPHQHDPVVPQKKKKILTYINCCIR
            H H    P ++++I +  NCC++
Subjt:  RLRPHQHDPVVPQKKKKILTYINCCIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACTCGGGCGGAGAAAAACAATAGGTGGAAATCTGTTCCAGAGTTTGGGGGATGGGATCACAACGCACCTGGGGCAAGCAATTATTCTGTTGTATTCTCTCAAGC
TCGTGCAAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAGCCAGCCTTGGAAATGAGAGGGAGATGATGGCAATGGCAGATAAACATCTTCGCCAACAGA
ACCACCACCACCACCGCCACCACAGCCACAACAGCCACCACAGCCGCTATGAACACCACCCACAATATCAACATCGTCTTCGCCCCCACCAGCACGACCCTGTTGTCCCG
CAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACTCGGGCGGAGAAAAACAATAGGTGGAAATCTGTTCCAGAGTTTGGGGGATGGGATCACAACGCACCTGGGGCAAGCAATTATTCTGTTGTATTCTCTCAAGC
TCGTGCAAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAGCCAGCCTTGGAAATGAGAGGGAGATGATGGCAATGGCAGATAAACATCTTCGCCAACAGA
ACCACCACCACCACCGCCACCACAGCCACAACAGCCACCACAGCCGCTATGAACACCACCCACAATATCAACATCGTCTTCGCCCCCACCAGCACGACCCTGTTGTCCCG
CAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA
Protein sequenceShow/hide protein sequence
MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVP
QKKKKILTYINCCIRP