; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02708 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02708
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionheterogeneous nuclear ribonucleoprotein F-like
Genome locationCarg_Chr02:7261978..7263692
RNA-Seq ExpressionCarg02708
SyntenyCarg02708
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035864.1 Heterogeneous nuclear ribonucleoprotein F, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-168100Show/hide
Query:  MFNPPVNFKREFGLGRIADPNPHTDTLLADYPHTSILLSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDC
        MFNPPVNFKREFGLGRIADPNPHTDTLLADYPHTSILLSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDC
Subjt:  MFNPPVNFKREFGLGRIADPNPHTDTLLADYPHTSILLSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDC

Query:  METDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAE
        METDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAE
Subjt:  METDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAE

Query:  HTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        HTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
Subjt:  HTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

TYJ96136.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]1.2e-13694.49Show/hide
Query:  LSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYP
        LS+ADGGDGREMGAKRQRIVDQGSSYYGTSPG+GFMYN SPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYP
Subjt:  LSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYP

Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTL
        LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR+APRSKLNDEVKD AEHTG+LRLRGLPYSAGKDDILDFFKGF LSED IHLTL
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTL

Query:  NSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        NSEGRPSGEAFVEF+NEQDSKAAMSKDRMTLGSRYIELFPSS EELDEAI+RGR
Subjt:  NSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

XP_022958677.1 heterogeneous nuclear ribonucleoprotein F-like [Cucurbita moschata]6.5e-143100Show/hide
Query:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
        SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
Subjt:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

XP_022995127.1 heterogeneous nuclear ribonucleoprotein F-like [Cucurbita maxima]1.2e-13997.23Show/hide
Query:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
        S+ADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYN SPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDI+FVHK+ KFTGEGFCVLGYPL
Subjt:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        QVDFALQRNRQN+GRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAI RGR
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

XP_023534703.1 heterogeneous nuclear ribonucleoprotein F-like [Cucurbita pepo subsp. pepo]3.0e-14098.42Show/hide
Query:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
        SFADG DGREMGAKRQRIVDQGSSYYGTSPGAGFMYN SPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
Subjt:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPR KLNDEVKDF EHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

TrEMBL top hitse value%identityAlignment
A0A0A0L205 RRM domain-containing protein2.2e-13694.47Show/hide
Query:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
        S+ADGGDGREMGAKRQRIVDQGSSYYGTSPG+GFMYN SPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPL
Subjt:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR+APRSKLNDEVKD AEHTG+LRLRGLPYSAGKDDILDFFKGF LSED IHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        SEGRPSGEAFVEF+NEQDSKAAMSKDRMTLGSRYIELFPSS EELDEAI+RGR
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

A0A5A7TH86 Heterogeneous nuclear ribonucleoprotein H isoform X15.8e-13794.49Show/hide
Query:  LSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYP
        LS+ADGGDGREMGAKRQRIVDQGSSYYGTSPG+GFMYN SPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYP
Subjt:  LSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYP

Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTL
        LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR+APRSKLNDEVKD AEHTG+LRLRGLPYSAGKDDILDFFKGF LSED IHLTL
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTL

Query:  NSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        NSEGRPSGEAFVEF+NEQDSKAAMSKDRMTLGSRYIELFPSS EELDEAI+RGR
Subjt:  NSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

A0A5D3BB71 Heterogeneous nuclear ribonucleoprotein H isoform X15.8e-13794.49Show/hide
Query:  LSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYP
        LS+ADGGDGREMGAKRQRIVDQGSSYYGTSPG+GFMYN SPYAYV QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYP
Subjt:  LSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYP

Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTL
        LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR+APRSKLNDEVKD AEHTG+LRLRGLPYSAGKDDILDFFKGF LSED IHLTL
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTL

Query:  NSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        NSEGRPSGEAFVEF+NEQDSKAAMSKDRMTLGSRYIELFPSS EELDEAI+RGR
Subjt:  NSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

A0A6J1H2H4 heterogeneous nuclear ribonucleoprotein F-like3.2e-143100Show/hide
Query:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
        SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
Subjt:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

A0A6J1JXX1 heterogeneous nuclear ribonucleoprotein F-like5.6e-14097.23Show/hide
Query:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL
        S+ADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYN SPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDI+FVHK+ KFTGEGFCVLGYPL
Subjt:  SFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        QVDFALQRNRQN+GRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAI RGR
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F1.6e-2736.68Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL
        + P S   D   D     G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+++ ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F1.0e-2637.19Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E      + V    G +   
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL
        TA     ND         G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+++ ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL

Q60HC3 Heterogeneous nuclear ribonucleoprotein F1.6e-2736.68Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL
        + P S   D   D     G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+++ ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL

Q794E4 Heterogeneous nuclear ribonucleoprotein F1.8e-2636.18Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL
        + P S   D   D     G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+++ ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F1.8e-2636.18Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----IIFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL
        + P S   D   D     G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+++ ++ A+ K +  +G RYIE+F SSQEE+
Subjt:  TAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEEL

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-10062.63Show/hide
Query:  FADGGDGREMGAKRQRIVDQG--SSYYGTSPGAGFMYNASPYAYVG--QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLG
        + DG DGREMG KRQR++DQG    +YG  P +GFMYN  PY +V    PPPFP VRLRGLPFDC E DV EFFHGLD+VD++FVH+N K TGE FCVLG
Subjt:  FADGGDGREMGAKRQRIVDQG--SSYYGTSPGAGFMYNASPYAYVG--QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLG

Query:  YPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDAR---------------------------------GGSPRRTAPRSKLNDEVKDFAEHT
        YPLQVDFALQ+NRQNMGRRYVE+FRS +QEYYKA+ANEV ++R                                 G SPRR   R++ +D+ K+  EHT
Subjt:  YPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDAR---------------------------------GGSPRRTAPRSKLNDEVKDFAEHT

Query:  GILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
        GILRLRGLP+SAGK+DILDFFK F LSED +H+T+N EGRP+GEAFVEF N +DS+AAM KDR TLGSRYIELFPSS EEL+EA++RGR
Subjt:  GILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

AT5G08695.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-0432.22Show/hide
Query:  NDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGF-ILSEDVIHLTLNSEGRP-SGEAFVEFANEQDSKAAMSK-DRMTLGSRYIELFPS
        +D+V D     G L + GLPYS  ++++++ F  F  +SE  +HL L+ + R   G AFV +   + +K AM K D++    R + + P+
Subjt:  NDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGF-ILSEDVIHLTLNSEGRP-SGEAFVEFANEQDSKAAMSK-DRMTLGSRYIELFPS

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-5946.25Show/hide
Query:  GGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPLQVDF
        G  G E+G+KRQR++ Q + Y     G     +  P+ Y G    FPVVRLRGLPF+C + D+ EFF GL+IVD++ V KNGKF+GE F V   P+QV+ 
Subjt:  GGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIIFVHKNGKFTGEGFCVLGYPLQVDF

Query:  ALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN
        ALQR+R NMGRRYVE+FR ++Q+YY AVA E     ++ R   P     R+K   E K+  E+T +L++RGLPYS  K  I++FF G+ + +  + +   
Subjt:  ALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVIHLTLN

Query:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
         +G+ +GEAFVEF   ++++ AM+KD+M++GSRY+ELFP+++EE   A AR R
Subjt:  SEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-3444.94Show/hide
Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVI
        +QV+ ALQR+R NMGRRYVE+FR ++Q+YY AVA E     ++ R   P     R+K   E K+  E+T +L++RGLPYS  K  I++FF G+ + +  +
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDILDFFKGFILSEDVI

Query:  HLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR
         +    +G+ +GEAFVEF   ++++ AM+KD+M++GSRY+ELFP+++EE   A AR R
Subjt:  HLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACCCTCCGGTGAATTTCAAGAGAGAATTTGGTCTTGGGAGAATTGCTGACCCGAACCCTCACACTGACACCTTACTTGCGGATTATCCCCACACCTCTATATT
ACTTTCATTTGCTGATGGTGGTGATGGTCGTGAAATGGGTGCAAAGCGTCAAAGGATAGTTGATCAGGGATCTTCTTATTATGGGACTTCTCCGGGTGCCGGGTTTATGT
ATAATGCAAGTCCTTATGCATATGTTGGTCAGCCACCACCGTTTCCCGTTGTCAGACTACGGGGTCTTCCCTTCGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCAT
GGTCTGGACATAGTTGACATTATTTTCGTCCACAAGAATGGCAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTATCCTCTGCAGGTTGATTTTGCCCTTCAAAGGAA
TAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGACAGGAATACTACAAGGCGGTAGCGAATGAAGTTTTCGATGCCCGGGGTGGTTCGCCAAGAA
GAACTGCACCCAGGTCGAAATTAAACGATGAGGTGAAAGACTTCGCCGAACACACAGGTATATTACGTTTGAGAGGACTGCCATATTCAGCAGGCAAGGATGACATACTG
GACTTCTTCAAAGGTTTTATCTTATCAGAAGACGTGATTCATCTAACACTGAATTCAGAGGGAAGGCCAAGTGGGGAAGCATTTGTCGAATTCGCAAACGAGCAAGACTC
GAAAGCAGCAATGTCCAAGGATAGAATGACACTAGGTAGCCGTTACATAGAGTTGTTCCCGTCATCCCAAGAAGAGCTAGACGAAGCTATCGCCAGAGGACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAACCCTCCGGTGAATTTCAAGAGAGAATTTGGTCTTGGGAGAATTGCTGACCCGAACCCTCACACTGACACCTTACTTGCGGATTATCCCCACACCTCTATATT
ACTTTCATTTGCTGATGGTGGTGATGGTCGTGAAATGGGTGCAAAGCGTCAAAGGATAGTTGATCAGGGATCTTCTTATTATGGGACTTCTCCGGGTGCCGGGTTTATGT
ATAATGCAAGTCCTTATGCATATGTTGGTCAGCCACCACCGTTTCCCGTTGTCAGACTACGGGGTCTTCCCTTCGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCAT
GGTCTGGACATAGTTGACATTATTTTCGTCCACAAGAATGGCAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTATCCTCTGCAGGTTGATTTTGCCCTTCAAAGGAA
TAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGACAGGAATACTACAAGGCGGTAGCGAATGAAGTTTTCGATGCCCGGGGTGGTTCGCCAAGAA
GAACTGCACCCAGGTCGAAATTAAACGATGAGGTGAAAGACTTCGCCGAACACACAGGTATATTACGTTTGAGAGGACTGCCATATTCAGCAGGCAAGGATGACATACTG
GACTTCTTCAAAGGTTTTATCTTATCAGAAGACGTGATTCATCTAACACTGAATTCAGAGGGAAGGCCAAGTGGGGAAGCATTTGTCGAATTCGCAAACGAGCAAGACTC
GAAAGCAGCAATGTCCAAGGATAGAATGACACTAGGTAGCCGTTACATAGAGTTGTTCCCGTCATCCCAAGAAGAGCTAGACGAAGCTATCGCCAGAGGACGGTGA
Protein sequenceShow/hide protein sequence
MFNPPVNFKREFGLGRIADPNPHTDTLLADYPHTSILLSFADGGDGREMGAKRQRIVDQGSSYYGTSPGAGFMYNASPYAYVGQPPPFPVVRLRGLPFDCMETDVAEFFH
GLDIVDIIFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRTAPRSKLNDEVKDFAEHTGILRLRGLPYSAGKDDIL
DFFKGFILSEDVIHLTLNSEGRPSGEAFVEFANEQDSKAAMSKDRMTLGSRYIELFPSSQEELDEAIARGR