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Carg02727 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02727
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAP2-like ethylene-responsive transcription factor
Genome locationCarg_Chr02:7182309..7183818
RNA-Seq ExpressionCarg02727
SyntenyCarg02727
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE02944.3 OSJNBa0014K14.16 [Oryza sativa Japonica Group]7.1e-2553.24Show/hide
Query:  RTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVA
        R  + T  Q  ++  GIDG+EDMK ICGII VG K    R  +                          SSGFSRGAS YRGVTRHHQHGRWQARIGRVA
Subjt:  RTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVA

Query:  GNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        GNKD+YLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  GNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

EEE61288.1 hypothetical protein OsJ_15374 [Oryza sativa Japonica Group]7.1e-2555.38Show/hide
Query:  SIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGT
        S++   GIDG+EDMK ICGII VG K    R  +                          SSGFSRGAS YRGVTRHHQHGRWQARIGRVAGNKD+YLGT
Subjt:  SIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGT

Query:  FSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        FS        Y    DIAAIKFRGLNAV++
Subjt:  FSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

GFP95788.1 ap2-like ethylene-responsive transcription factor plt2 [Phtheirospermum japonicum]4.6e-2454.96Show/hide
Query:  QSIAVSPGIDGREDMKHICGIIVVGGK---GSQGRVV-----------------------KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLG
        Q  ++  GIDG  DM+HI GIIV   K   G +G++                        KSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLG
Subjt:  QSIAVSPGIDGREDMKHICGIIVVGGK---GSQGRVV-----------------------KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLG

Query:  TFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        TFS        Y    DIAAIKFRGLNAV++
Subjt:  TFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

KAG7035845.1 AP2-like ethylene-responsive transcription factor PLT1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-65100Show/hide
Query:  MSPPQELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPI
        MSPPQELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPI
Subjt:  MSPPQELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPI

Query:  YYLFKDIAAIKFRGLNAVSHKLPRVVMT
        YYLFKDIAAIKFRGLNAVSHKLPRVVMT
Subjt:  YYLFKDIAAIKFRGLNAVSHKLPRVVMT

PQM40714.1 AP2-like ethylene-responsive transcription factor AIL1 [Prunus yedoensis var. nudiflora]1.5e-2755.63Show/hide
Query:  QELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRV--------------------------VKSSGFSRGASMYRGVTRHHQHGRWQARIG
        + L TLL +EL S  VSPGI G  DM+ ICGIIV   KG QG+                            KSSGFSRGAS+YRGVTRHHQHGRWQARIG
Subjt:  QELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRV--------------------------VKSSGFSRGASMYRGVTRHHQHGRWQARIG

Query:  RVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        RVAGNKDLYLGTFS        Y    DIAAIKFRG +AV++
Subjt:  RVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

TrEMBL top hitse value%identityAlignment
A0A0D3FXN9 AP2/ERF domain-containing protein1.7e-2457.26Show/hide
Query:  GIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLST
        GIDG+EDMK ICGII VG K    R  +                          SSGFSRGAS YRGVTRHHQHGRWQARIGRVAGNKD+YLGTFS    
Subjt:  GIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLST

Query:  LYPIYYLFKDIAAIKFRGLNAVSH
            Y    DIAAIKFRGLNAV++
Subjt:  LYPIYYLFKDIAAIKFRGLNAVSH

A0A0E0H2W1 AP2/ERF domain-containing protein1.7e-2457.26Show/hide
Query:  GIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLST
        GIDG+EDMK ICGII VG K    R  +                          SSGFSRGAS YRGVTRHHQHGRWQARIGRVAGNKD+YLGTFS    
Subjt:  GIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLST

Query:  LYPIYYLFKDIAAIKFRGLNAVSH
            Y    DIAAIKFRGLNAV++
Subjt:  LYPIYYLFKDIAAIKFRGLNAVSH

A0A314UW05 AP2-like ethylene-responsive transcription factor AIL17.4e-2855.63Show/hide
Query:  QELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRV--------------------------VKSSGFSRGASMYRGVTRHHQHGRWQARIG
        + L TLL +EL S  VSPGI G  DM+ ICGIIV   KG QG+                            KSSGFSRGAS+YRGVTRHHQHGRWQARIG
Subjt:  QELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRV--------------------------VKSSGFSRGASMYRGVTRHHQHGRWQARIG

Query:  RVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        RVAGNKDLYLGTFS        Y    DIAAIKFRG +AV++
Subjt:  RVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

B9FG04 AP2/ERF domain-containing protein3.4e-2555.38Show/hide
Query:  SIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGT
        S++   GIDG+EDMK ICGII VG K    R  +                          SSGFSRGAS YRGVTRHHQHGRWQARIGRVAGNKD+YLGT
Subjt:  SIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGT

Query:  FSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        FS        Y    DIAAIKFRGLNAV++
Subjt:  FSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

Q7X6D4 OSJNBa0014K14.16 protein3.4e-2553.24Show/hide
Query:  RTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVA
        R  + T  Q  ++  GIDG+EDMK ICGII VG K    R  +                          SSGFSRGAS YRGVTRHHQHGRWQARIGRVA
Subjt:  RTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVK--------------------------SSGFSRGASMYRGVTRHHQHGRWQARIGRVA

Query:  GNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        GNKD+YLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  GNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

SwissProt top hitse value%identityAlignment
Q1PFE1 AP2-like ethylene-responsive transcription factor AIL16.9e-2378.57Show/hide
Query:  SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        SSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

Q5YGP7 AP2-like ethylene-responsive transcription factor PLT28.1e-2480.28Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

Q5YGP8 AP2-like ethylene-responsive transcription factor PLT18.1e-2480.28Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

Q6PQQ3 AP2-like ethylene-responsive transcription factor AIL56.2e-2480.28Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

Q84Z02 AP2-like ethylene-responsive transcription factor CRL51.8e-2377.46Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRV+GNKDLYLGTFS        Y    D+AAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

Arabidopsis top hitse value%identityAlignment
AT1G51190.1 Integrase-type DNA-binding superfamily protein5.8e-2580.28Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

AT1G72570.1 Integrase-type DNA-binding superfamily protein4.9e-2478.57Show/hide
Query:  SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        SSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  SSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

AT3G20840.1 Integrase-type DNA-binding superfamily protein5.8e-2580.28Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

AT5G17430.1 Integrase-type DNA-binding superfamily protein1.4e-2376.06Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTF         Y    DIAAIKFRGL+AV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH

AT5G57390.1 AINTEGUMENTA-like 54.4e-2580.28Show/hide
Query:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH
        KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS        Y    DIAAIKFRGLNAV++
Subjt:  KSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAIKFRGLNAVSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCCCCACAAGAACTTCGGACACTCTTGGGCACAGAACTTCAATCTATCGCGGTGTCACCAGGCATCGATGGACGGGAAGATATGAAGCACATTTGTGGGATAAT
AGTTGTAGGAGGGAAGGGCAGTCAAGGAAGGGTCGTCAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATGTATCGTGGTGTTACAAGGCACCACCAGCATGGAAGATGGC
AGGCCAGGATTGGACGAGTGGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGTAAGCTCTCAACATTATATCCTATCTATTATTTGTTTAAAGACATAGCCGCCATC
AAATTCAGAGGGCTTAACGCAGTCAGTCACAAACTTCCACGAGTCGTTATGACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCCCCACAAGAACTTCGGACACTCTTGGGCACAGAACTTCAATCTATCGCGGTGTCACCAGGCATCGATGGACGGGAAGATATGAAGCACATTTGTGGGATAAT
AGTTGTAGGAGGGAAGGGCAGTCAAGGAAGGGTCGTCAAGAGTAGTGGGTTTTCAAGGGGTGCATCAATGTATCGTGGTGTTACAAGGCACCACCAGCATGGAAGATGGC
AGGCCAGGATTGGACGAGTGGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGTAAGCTCTCAACATTATATCCTATCTATTATTTGTTTAAAGACATAGCCGCCATC
AAATTCAGAGGGCTTAACGCAGTCAGTCACAAACTTCCACGAGTCGTTATGACGTGA
Protein sequenceShow/hide protein sequence
MSPPQELRTLLGTELQSIAVSPGIDGREDMKHICGIIVVGGKGSQGRVVKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSKLSTLYPIYYLFKDIAAI
KFRGLNAVSHKLPRVVMT