CuGenDBv2

Gene ID	Carg02769
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	Carg_Chr02:6949334..6954012
RNA-Seq Expression	Carg02769
Synteny	Carg02769
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0006310 - DNA recombination (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0016740 - transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035803.1 Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-208

100

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT
        PDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT
Subjt:  PDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT

XP_022957637.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]

2.6e-178

99.04

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAHPR
Subjt:  PDTRRITRSSAHPR

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

7.7e-178

99.04

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

7.7e-178

99.04

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

XP_023533198.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo]

1.7e-177

98.73

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRS+AH R
Subjt:  PDTRRITRSSAHPR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

5.2e-156

88.29

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP
        CNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP

Query:  PPDTRRITRSSAHPRN
        PP+TRR+TRSSA  R+
Subjt:  PPDTRRITRSSAHPRN

A0A6J1DLJ6 Non-structural maintenance of chromosomes element 1 homolog

1.6e-157

87.35

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP
        CNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP

Query:  PPDTRRITRSSAHPRNYAL-WCDD
        PP+TRR+TRSSA   N A+ WC D
Subjt:  PPDTRRITRSSAHPRNYAL-WCDD

A0A6J1GZN9 Non-structural maintenance of chromosomes element 1 homolog

1.3e-178

99.04

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAHPR
Subjt:  PDTRRITRSSAHPR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

3.7e-178

99.04

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

3.7e-178

99.04

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP

Query:  PDTRRITRSSAHPR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHPR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

6.0e-08

21.15

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Query:  ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDN-DRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY
        +++  H   +Q L++ G +       L     E    N      ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  +
Subjt:  ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDN-DRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY

Query:  KAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP
        +  +E I    S  G    I+ L+L  E Q                  S  +K+K + +L     QD+WL    +G   L  R  ++L  +      D+ 
Subjt:  KAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP

Query:  S-CEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR
          C VC++  ++ +LC N  C + +H  C   +     +   CP+C   W    P++          +++  Q  SH +
Subjt:  S-CEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

2.2e-10

21.99

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Query:  HHTLIQALLARGPLREDHFHLLFTRITE-KSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE
        H   +QAL++ G +       L     E           ++++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E
Subjt:  HHTLIQALLARGPLREDHFHLLFTRITE-KSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE

Query:  AIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV
         I    S  G  ++I+ L+L  E Q                  S  +K+K + +L     Q++WL    +G   L  R  ++L  + R    D+   C V
Subjt:  AIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV

Query:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD
        C +  ++++LC N  C + +H  C  K   + K+   CP+C   W    P++           ++  Q  SH + +T   R+
Subjt:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

1.5e-94

55.38

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        +K I+EAIAQD +AQG IS+  AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQ
        CNEAGVKA+LC  EGC VR+H YCLKK+LS +  KR C  CG  W  S     E  EE    +   + Q+++ K K+ R  R  DS  NG S A+  AS 
Subjt:  CNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQ

Query:  PPPDTRRITRSSAHPR
           +TRR+TRS  H R
Subjt:  PPPDTRRITRSSAHPR

Sequences

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CDS sequence

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ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAG
TCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTG
TTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAA
GATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAA
GAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTG
ATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACAT
CCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGA
GGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGG
CACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGG
TCTGGATTGTGTAAAAAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGA

mRNA sequence

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CTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAATTTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTA
GCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCT
GTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCT
GCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAA
GCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTC
CCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAA
ATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAAT
GAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACC
CAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGAC
CAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGAATTATGCTCTGTGGTGTGATGAT
GAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGAGT
GGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCCTTTGCCTTGTTTAAACAAGAACA
GAATCCAAAGTAAAGTCTCAATTCAAAAGGTATAACCATTTTGCCATTTATTATCTGTTCTATTATTATAAAGTATGAGTAAATATTCGTCCTTCTTCTG

Protein sequence

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MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQ
DPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH
PYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPPPDTRRITRSSAHPRNYALWCDDEQLNMYDG
SGLCKKLNFVLISGLCSLENDETSDGT

Carg02769 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome