CuGenDBv2

Gene ID	Carg02823
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein FAM33A
Genome location	Carg_Chr09:1892830..1896399
RNA-Seq Expression	Carg02823
Synteny	Carg02823
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-76

88.57

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

KAG7024402.1 hypothetical protein SDJN02_13216, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-91

100

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_022935897.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]

6.4e-77

89.14

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_022935898.1 spindle and kinetochore-associated protein 2 isoform X2 [Cucurbita moschata]

3.9e-74

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI  DGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

XP_023534877.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo]

6.0e-75

87.43

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNM+HKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CJF1 Protein FAM33A

5.5e-66

79.19

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKL  RIKKIRDDISTL+EQCRE+LMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV
        KARTVLVGNRNM+ KMQASMG P VSD DD AF QFK+ITEEWTTQVQSKIG+DGQEDA+S+DVNKLLFSAVV
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A

3.1e-77

89.14

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

A0A6J1FBS9 Protein FAM33A

1.9e-74

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI  DGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

A0A6J1IP41 Protein FAM33A

7.1e-74

86.29

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCR+VLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNM+ KMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

A0A6J1IQK7 Protein FAM33A

4.3e-71

85.14

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Query:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID
        M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDS                   ANPMKLALRIKKIRDDISTLKEQCR+VLMAKQDVID
Subjt:  MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVID

Query:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE
        KARTVLVGNRNM+ KMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKI  DGQEDAESSDVNKLLFSAVVQE
Subjt:  KARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

4.0e-37

49.12

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Query:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKA
        + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +                   ANPMKL  RIKK+++D++ LK QC ++L AKQD+IDKA
Subjt:  LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKA

Query:  RTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSK-IGEDGQEDAESSDVNKLLFSAV
        +T LVGN N++ KM AS+G+    D DD A   F QI +EWT QV+S+ +GE   EDA+  D+NK+LFSA+
Subjt:  RTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSK-IGEDGQEDAESSDVNKLLFSAV

Sequences

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CDS sequence

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ATGGGGCTCGATCATCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGA
GTTTCAGCAAATCTATCCTGACAGCATTATCCTTCATATTCTTTCTGGAAAACATGAATACGAATCTGTTGTTGCTCAACTGGCGAATCCAATGAAGTTAGCTTTAAGGA
TAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGA
AACATGGTACACAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCGGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGT
TCAATCAAAAATTGGGGAAGATGGCCAAGAGGACGCAGAGTCTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAA

mRNA sequence

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Protein sequence

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MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSIILHILSGKHEYESVVAQLANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNR
NMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE

Carg02823 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome