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Carg02865 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02865
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBeta-1,3-N-Acetylglucosaminyltransferase family protein
Genome locationCarg_Chr09:2123518..2124392
RNA-Seq ExpressionCarg02865
SyntenyCarg02865
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063321.1 TPD1 protein-like protein 1A-like [Cucumis melo var. makuwa]1.7e-5585.04Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLS MIAAI+IL LSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQ+INNCDCPQKQI+LSC GFQT+EPVDPSI+SKQ D CLLINGGIVQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSV FSYAWDPP I+ PRFSVS C T
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

XP_022141679.1 uncharacterized protein LOC111011980 [Momordica charantia]2.5e-5484Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLS MIAAILIL LSFIN+G   G+CSLDTINIGT+RSGR IGGQPEWNVQVINNCDCPQKQIVLSCPGFQT EPV PSI+SKQGD CLLING  VQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQC
         +SV FSYAWDPPFI+FPRFSV+QC
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQC

XP_022937408.1 uncharacterized protein LOC111443708 [Cucurbita moschata]1.4e-6598.43Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLSAMIAAILILFLSFINEGFGA SCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDAC LINGGIVQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSVQFSYAWDPPFILFPRFSVSQCHT
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

XP_022976215.1 uncharacterized protein LOC111476671 [Cucurbita maxima]5.7e-67100Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSVQFSYAWDPPFILFPRFSVSQCHT
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

XP_038899927.1 uncharacterized protein LOC120087115 [Benincasa hispida]2.0e-5686.61Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINL  MIAAI ILFLSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQVINNC+CPQKQIVLSCPGFQT+EPVDPSI+SKQ D CLLINGG VQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSV FSYAWDPP I+FPR SVSQC T
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

TrEMBL top hitse value%identityAlignment
A0A5A7VC88 TPD1 protein-like protein 1A-like8.3e-5685.04Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLS MIAAI+IL LSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQ+INNCDCPQKQI+LSC GFQT+EPVDPSI+SKQ D CLLINGGIVQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSV FSYAWDPP I+ PRFSVS C T
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

A0A5D3E811 TPD1 protein-like protein 1A-like7.8e-5485.95Show/hide
Query:  MIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQF
        MIAAI+IL LSFINEG  AGSCSLDTINIGTQRSGR IGGQPEWNVQVINNCDCPQKQI+LSC GFQT+EPVDPSI+SKQ D CLLINGGIVQPGSSV F
Subjt:  MIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQF

Query:  SYAWDPPFILFPRFSVSQCHT
        SYAWDPP I+ PRFSVS C T
Subjt:  SYAWDPPFILFPRFSVSQCHT

A0A6J1CJF7 uncharacterized protein LOC1110119801.2e-5484Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLS MIAAILIL LSFIN+G   G+CSLDTINIGT+RSGR IGGQPEWNVQVINNCDCPQKQIVLSCPGFQT EPV PSI+SKQGD CLLING  VQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQC
         +SV FSYAWDPPFI+FPRFSV+QC
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQC

A0A6J1FFZ8 uncharacterized protein LOC1114437086.8e-6698.43Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLSAMIAAILILFLSFINEGFGA SCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDAC LINGGIVQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSVQFSYAWDPPFILFPRFSVSQCHT
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

A0A6J1IIV5 uncharacterized protein LOC1114766712.7e-67100Show/hide
Query:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
        MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP
Subjt:  MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQP

Query:  GSSVQFSYAWDPPFILFPRFSVSQCHT
        GSSVQFSYAWDPPFILFPRFSVSQCHT
Subjt:  GSSVQFSYAWDPPFILFPRFSVSQCHT

SwissProt top hitse value%identityAlignment
Q1G3T1 TPD1 protein homolog 17.6e-0632.94Show/hide
Query:  CSLDTINIGTQRSGRVIGGQPEWNVQVINNC--DCPQKQIVLSCPGFQTVEPVDPSIVSK-QGDACLLINGGIVQPGSSVQFSYA
        CS D I +    +  +  G P + V++ N+C  DC   +I +SC  F +V  V+P +  +   D CL+ +G  + PG S+ F YA
Subjt:  CSLDTINIGTQRSGRVIGGQPEWNVQVINNC--DCPQKQIVLSCPGFQTVEPVDPSIVSK-QGDACLLINGGIVQPGSSVQFSYA

Arabidopsis top hitse value%identityAlignment
AT1G32583.1 FUNCTIONS IN: molecular_function unknown5.4e-0732.94Show/hide
Query:  CSLDTINIGTQRSGRVIGGQPEWNVQVINNC--DCPQKQIVLSCPGFQTVEPVDPSIVSK-QGDACLLINGGIVQPGSSVQFSYA
        CS D I +    +  +  G P + V++ N+C  DC   +I +SC  F +V  V+P +  +   D CL+ +G  + PG S+ F YA
Subjt:  CSLDTINIGTQRSGRVIGGQPEWNVQVINNC--DCPQKQIVLSCPGFQTVEPVDPSIVSK-QGDACLLINGGIVQPGSSVQFSYA

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein4.5e-2243.93Show/hide
Query:  AMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQ
        A+   +++L LS ++ G     C+   I IG  R+GR IGGQPEW V VIN C+C QK + LSC GF   +PV P ++  QG+ CL+I G  +  G++ Q
Subjt:  AMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQ

Query:  FSYAWDP
        F+YA  P
Subjt:  FSYAWDP

AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein4.0e-1836.19Show/hide
Query:  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWD
        L+L  +F+ +G+G  S SL+++++   ++G ++  +PEW V+V+N+  C      LSC  F++V P+D  ++SK GD CLL NG  +     + F Y WD
Subjt:  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAWD

Query:  PPFIL
          F L
Subjt:  PPFIL

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein7.2e-2041.51Show/hide
Query:  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNC-DCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAW
        L+LFL+F+N+G+  G C L+ +++   ++G+++  +PEW V+V N C +C  +   LSC GFQ+V PV  S++SK GD CLL  G  + P     F+Y W
Subjt:  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNC-DCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAW

Query:  DPPFIL
        D  F L
Subjt:  DPPFIL

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.9e-2037.93Show/hide
Query:  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNC-DCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAW
        L+LFL+F+N+G+  G CSL+++++   ++G+++  +PEW V+V N C +C  +   L C GF +V P+D S++ K GDACL+  G  + P   + F Y W
Subjt:  LILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNC-DCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAW

Query:  DPPFILFPRFSVSQCH
        D  F L     V  C+
Subjt:  DPPFILFPRFSVSQCH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAACCTCTCCGCCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGGTTTGGTGCTGGAAGCTGCAGTTTGGACACCATTAACATAGGAAC
ACAGAGAAGTGGAAGGGTGATTGGGGGCCAACCTGAATGGAACGTGCAAGTGATTAACAACTGCGATTGTCCTCAGAAGCAGATCGTCTTGTCCTGCCCAGGGTTTCAGA
CTGTTGAACCTGTTGATCCATCGATTGTGTCAAAGCAAGGGGACGCTTGCCTGCTCATAAATGGAGGAATTGTTCAGCCTGGTTCTTCAGTTCAATTTTCCTATGCTTGG
GATCCCCCTTTCATCTTGTTCCCTCGTTTCTCTGTTTCTCAGTGTCATACCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAGTAGCAAAAAAATCCCATCACGATTTGCATCTTCCTATTTTTGTTCTCAACTACATAGTGTTCAAAAACAGTCAACCCAAATGAAACATTATGTTGACAG
CACATCACACTAAAGACTTGCGTGAGAGTCTTGAATTAATTTTCTTTTTCTTCTAGACCATTATTAGTTTAATAATTATTGCCATAATAAACCAATGAGCAAAGCCGTTC
AAAATACAGATATGAAGACAGACACTAGCAAACCATAATTTCCAAGAACAAGAAATCATAAAAACAGAGAATTTGGTTTCTAAACTCACTTACCTCAAAAGCATTCCCTT
CTGCTATGATCAACCTCTCCGCCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGGTTTGGTGCTGGAAGCTGCAGTTTGGACACCATTAACATA
GGAACACAGAGAAGTGGAAGGGTGATTGGGGGCCAACCTGAATGGAACGTGCAAGTGATTAACAACTGCGATTGTCCTCAGAAGCAGATCGTCTTGTCCTGCCCAGGGTT
TCAGACTGTTGAACCTGTTGATCCATCGATTGTGTCAAAGCAAGGGGACGCTTGCCTGCTCATAAATGGAGGAATTGTTCAGCCTGGTTCTTCAGTTCAATTTTCCTATG
CTTGGGATCCCCCTTTCATCTTGTTCCCTCGTTTCTCTGTTTCTCAGTGTCATACCTGAAGCAACAACAAACAATATTAAAAAGTTGTCAATTTAGTCTGAGTTAATCGT
Protein sequenceShow/hide protein sequence
MINLSAMIAAILILFLSFINEGFGAGSCSLDTINIGTQRSGRVIGGQPEWNVQVINNCDCPQKQIVLSCPGFQTVEPVDPSIVSKQGDACLLINGGIVQPGSSVQFSYAW
DPPFILFPRFSVSQCHT