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Carg02881 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02881
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:2214212..2217005
RNA-Seq ExpressionCarg02881
SyntenyCarg02881
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591569.1 putative clathrin assembly protein, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1994.64Show/hide
Query:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKN
        MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPL TDRILIVQ++
Subjt:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKN

KAG7024458.1 hypothetical protein SDJN02_13273, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-25100Show/hide
Query:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQLKVI
        MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQLKVI
Subjt:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQLKVI

XP_022976220.1 uncharacterized protein LOC111476675 [Cucurbita maxima]1.7e-2193.1Show/hide
Query:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQL
        MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKN+VFAYSRPLTTDRILIVQ ++L
Subjt:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQL

TrEMBL top hitse value%identityAlignment
A0A6J1IIW0 uncharacterized protein LOC1114766758.4e-2293.1Show/hide
Query:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQL
        MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKN+VFAYSRPLTTDRILIVQ ++L
Subjt:  MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGTGGCTCTACGCTGCCATTCCGGCGTCTTTTTCGCTTCATTATTTTTCACTCACTGAACCACTGTTTTCAGCTTGCTTTTAAACTCCAGCGATTGAAGAATGT
TGTTTTTGCTTATTCGAGGCCGTTAACGACCGATCGGATTCTTATCGTGCAGAAAAATCAATTGAAAGTTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGTGGCTCTACGCTGCCATTCCGGCGTCTTTTTCGCTTCATTATTTTTCACTCACTGAACCACTGTTTTCAGCTTGCTTTTAAACTCCAGCGATTGAAGAATGT
TGTTTTTGCTTATTCGAGGCCGTTAACGACCGATCGGATTCTTATCGTGCAGAAAAATCAATTGAAAGTTATATAA
Protein sequenceShow/hide protein sequence
MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTTDRILIVQKNQLKVI