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Carg02897 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02897
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATPase, F0/V0 complex, subunit C protein
Genome locationCarg_Chr09:2303645..2307842
RNA-Seq ExpressionCarg02897
SyntenyCarg02897
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024474.1 hypothetical protein SDJN02_13289, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-105100Show/hide
Query:  MKRIVFCRELALHEAHCLLSLHLEIFTRLESTIRETEIHRQRRVRLRESSSFLIRETEIHAGNVDACGFGNTVRVRQEFELRGIKLAKLKQSGMRKSHWG
        MKRIVFCRELALHEAHCLLSLHLEIFTRLESTIRETEIHRQRRVRLRESSSFLIRETEIHAGNVDACGFGNTVRVRQEFELRGIKLAKLKQSGMRKSHWG
Subjt:  MKRIVFCRELALHEAHCLLSLHLEIFTRLESTIRETEIHRQRRVRLRESSSFLIRETEIHAGNVDACGFGNTVRVRQEFELRGIKLAKLKQSGMRKSHWG

Query:  NQSAGISDVHRKTDQQCRPRAWPEILALAPTRSSESPPTPSPPRIYITGSSLIGAAIKAPLLTSKNLIRATENNSCLEAYQNNLILEQESCRSHGKTA
        NQSAGISDVHRKTDQQCRPRAWPEILALAPTRSSESPPTPSPPRIYITGSSLIGAAIKAPLLTSKNLIRATENNSCLEAYQNNLILEQESCRSHGKTA
Subjt:  NQSAGISDVHRKTDQQCRPRAWPEILALAPTRSSESPPTPSPPRIYITGSSLIGAAIKAPLLTSKNLIRATENNSCLEAYQNNLILEQESCRSHGKTA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25610.1 ATPase, F0/V0 complex, subunit C protein3.9e-0487.5Show/hide
Query:  IYITGSSLIGAAIKAPLLTSKNLI
        IYITGSSLIGAAI+AP +TSKNLI
Subjt:  IYITGSSLIGAAIKAPLLTSKNLI
AT4G32530.1 ATPase, F0/V0 complex, subunit C protein3.9e-0487.5Show/hide
Query:  IYITGSSLIGAAIKAPLLTSKNLI
        IYITGSSLIGAAI+AP +TSKNLI
Subjt:  IYITGSSLIGAAIKAPLLTSKNLI
AT4G32530.2 ATPase, F0/V0 complex, subunit C protein3.9e-0487.5Show/hide
Query:  IYITGSSLIGAAIKAPLLTSKNLI
        IYITGSSLIGAAI+AP +TSKNLI
Subjt:  IYITGSSLIGAAIKAPLLTSKNLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGCATTGTCTTTTGTCGCGAATTGGCTCTCCATGAAGCGCATTGTCTTTTGTCGCTCCATCTCGAGATCTTCACACGCCTAGAATCGACCATTCGAGAGACGGA
GATTCACCGGCAACGCCGAGTTCGATTGCGAGAATCAAGCTCGTTCCTAATAAGAGAGACGGAGATTCACGCGGGCAACGTAGATGCGTGTGGTTTTGGGAACACAGTTA
GAGTACGCCAAGAGTTCGAGTTGCGAGGAATCAAGCTCGCTAAACTAAAGCAATCTGGAATGCGGAAGTCGCACTGGGGGAATCAATCAGCCGGAATCTCCGACGTTCAT
CGAAAGACCGATCAACAATGTCGCCCTCGAGCATGGCCGGAGATCTTAGCTCTTGCTCCGACGCGCTCGTCTGAATCTCCCCCTACACCTTCTCCGCCGCGGATCTACAT
AACCGGTAGCAGCTTGATCGGTGCTGCAATCAAAGCTCCGCTTCTTACCTCGAAGAATCTAATTAGGGCAACTGAGAACAACTCTTGCCTGGAGGCATATCAGAACAATT
TGATTCTCGAACAGGAGTCATGCAGGAGTCATGGGAAAACCGCG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGCATTGTCTTTTGTCGCGAATTGGCTCTCCATGAAGCGCATTGTCTTTTGTCGCTCCATCTCGAGATCTTCACACGCCTAGAATCGACCATTCGAGAGACGGA
GATTCACCGGCAACGCCGAGTTCGATTGCGAGAATCAAGCTCGTTCCTAATAAGAGAGACGGAGATTCACGCGGGCAACGTAGATGCGTGTGGTTTTGGGAACACAGTTA
GAGTACGCCAAGAGTTCGAGTTGCGAGGAATCAAGCTCGCTAAACTAAAGCAATCTGGAATGCGGAAGTCGCACTGGGGGAATCAATCAGCCGGAATCTCCGACGTTCAT
CGAAAGACCGATCAACAATGTCGCCCTCGAGCATGGCCGGAGATCTTAGCTCTTGCTCCGACGCGCTCGTCTGAATCTCCCCCTACACCTTCTCCGCCGCGGATCTACAT
AACCGGTAGCAGCTTGATCGGTGCTGCAATCAAAGCTCCGCTTCTTACCTCGAAGAATCTAATTAGGGCAACTGAGAACAACTCTTGCCTGGAGGCATATCAGAACAATT
TGATTCTCGAACAGGAGTCATGCAGGAGTCATGGGAAAACCGCG
Protein sequenceShow/hide protein sequence
MKRIVFCRELALHEAHCLLSLHLEIFTRLESTIRETEIHRQRRVRLRESSSFLIRETEIHAGNVDACGFGNTVRVRQEFELRGIKLAKLKQSGMRKSHWGNQSAGISDVH
RKTDQQCRPRAWPEILALAPTRSSESPPTPSPPRIYITGSSLIGAAIKAPLLTSKNLIRATENNSCLEAYQNNLILEQESCRSHGKTA