; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02964 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02964
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr09:2683482..2685733
RNA-Seq ExpressionCarg02964
SyntenyCarg02964
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR033443 - Pentacotripeptide-repeat region of PRORP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591657.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.5e-15288.82Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYS KRAFEFSADLRTYEALIH                                   GFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

KAG7024539.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-179100Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

XP_022936078.1 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 [Cucurbita moschata]1.1e-16796.81Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSS LSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGV+PTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYSA RAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEIL
        FESG  +G    L
Subjt:  FESGEAEGMEEIL

XP_022975914.1 pentatricopeptide repeat-containing protein At2g37230-like isoform X1 [Cucurbita maxima]3.9e-17397.2Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLRLQE HYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPEN FLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSV SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

XP_023534997.1 pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucurbita pepo subsp. pepo]4.2e-17598.14Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLR QE HYRCICRRFVSTDPSNSILNP VLRLIQEPSSSVKSVLDSPENAFLG+SRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKR D
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

TrEMBL top hitse value%identityAlignment
A0A0A0LJI4 Uncharacterized protein8.1e-13276.42Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MA    RVLALA+  S  VPL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS  ALVTSLISSS  KKAQL LE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        W+LE MSK+NERD DFYI+LI LCG+L+N  LAMRVF  MEFQGVKPTVTAFNSLIE CISS+NMITAFS+FE+MKNS++ KPN DTF+YFISAFAK HD
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSVKS CFDF V+CF+EM+LS IVPN IIL+NMLEG CKRK+ DE+KKFL VVLD GWEI+WNVVEKFIP+W
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNE
        FESGE EGM+EILTKLN+
Subjt:  FESGEAEGMEEILTKLNE

A0A1S3CS56 pentatricopeptide repeat-containing protein At3g09060-like1.5e-13376.18Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MA    RVL LA+  S  +PL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        W+LEKMSK NE DPD YI+LIRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++ KPN DTF+YFIS F+K  D
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEINWNVVEKFIP+W
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEA
        FESGE EGM+EILTK+N++
Subjt:  FESGEAEGMEEILTKLNEA

A0A5D3E5Z9 Pentatricopeptide repeat-containing protein1.5e-13376.18Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MA    RVL LA+  S  +PL+ Q+PHY  I R F STDPS SI NPL+L+L+QEP+SSVKSVLDS EN FL SSRLS   LVTSLISSS PKKAQL LE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        W+LEKMSK NE DPD YI+LIRLCG+L++  LAMRVFT MEFQGVKPTVTAFNSLIE CISSHNMITAF +FE+MKNS++ KPN DTF+YFIS F+K  D
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSM+AWYSAK+AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMMLS IVPNAIIL+NMLEG CKRK+ DE+KKFL VVLD GWEINWNVVEKFIP+W
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEA
        FESGE EGM+EILTK+N++
Subjt:  FESGEAEGMEEILTKLNEA

A0A6J1FC94 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X15.3e-16896.81Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSS LSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGV+PTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYSA RAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEIL
        FESG  +G    L
Subjt:  FESGEAEGMEEIL

A0A6J1II25 pentatricopeptide repeat-containing protein At2g37230-like isoform X11.9e-17397.2Show/hide
Query:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE
        MAVARNRVLALAKGGSSR+PLRLQE HYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPEN FLGSSRLSWKALVTSLISSSSPKKAQLALE
Subjt:  MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALE

Query:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD
        WRLEKM+KENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSES KPNADTFFYFISAFAK  D
Subjt:  WRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHD

Query:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW
        VNSMEAWYSAKRAFEFSADLRTYEALIHGSV SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEI WNVVEKFIPIW
Subjt:  VNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIW

Query:  FESGEAEGMEEILTKLNEAARL
        FESGEAEGMEEILTKLNEAARL
Subjt:  FESGEAEGMEEILTKLNEAARL

SwissProt top hitse value%identityAlignment
Q9CAN0 Pentatricopeptide repeat-containing protein At1g63130, mitochondrial7.3e-1324.78Show/hide
Query:  KKAQLALEWRLEKMSKENERDPD--FYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFY
        K+  + L   L K  ++ + +P    Y  +I      +NV  A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF  
Subjt:  KKAQLALEWRLEKMSKENERDPD--FYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFY

Query:  FISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINW
         I AF K   +   E  Y          D+ TY +LI+G       D A   F+ M+     PN +  + +++GFCK K +DE  +    +  +G   N 
Subjt:  FISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINW

Query:  NVVEKFIPIWFESGEAEGMEEILTKL
              I  +F++ E +  + +  ++
Subjt:  NVVEKFIPIWFESGEAEGMEEILTKL

Q9FLL3 Pentatricopeptide repeat-containing protein At5g41170, mitochondrial2.0e-1026.06Show/hide
Query:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIH
        +V  A+ +F  ME  G++P V  + SL+    +S     A S+   M      KP+  TF   I AF K       E  Y+       + ++ TY +LI+
Subjt:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIH

Query:  GSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL
        G     C D A + F  M   G  P+ +   +++ GFCK K +D+  K    +  KG   N       I  + + G+    +E+ + +
Subjt:  GSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic2.3e-1426.98Show/hide
Query:  LEKMSK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDV
        L+KM K + E D   Y  +I      +NV  A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +
Subjt:  LEKMSK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDV

Query:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWF
           E  Y          D+ TY +LI+G       D A   F+ M+     PN +  + +++GFCK K ++E  +    +  +G   N       I   F
Subjt:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWF

Query:  ESGEAEGMEEILTKL
        ++G+ +  ++I  K+
Subjt:  ESGEAEGMEEILTKL

Q9M302 Pentatricopeptide repeat-containing protein At3g488104.0e-1121.4Show/hide
Query:  WKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS
        + AL+  L      K    A E   E + K    +   Y  LI +      + LA    T M  +G  P +   +SL++ C        A  ++  M   
Subjt:  WKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS

Query:  ESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL
           +PN   +   +  F    ++    + +S       S ++RTY +LI+G  K    D AV  +++M+ SG  PN ++  NM+E  C+     E +  +
Subjt:  ESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL

Query:  TVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR
         ++  +    +      FI    ++G  +  E++  ++ +  R
Subjt:  TVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR

Q9SH26 Pentatricopeptide repeat-containing protein At1g634008.9e-1125.54Show/hide
Query:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVK
        A+ +FT ME +GV+P V  ++SLI  C+ ++   +  S            PN  TF   I AF K   +   E  Y          D+ TY +LI+G   
Subjt:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVK

Query:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL
            D A   F+ M+     PN +  + ++ GFCK K +DE  +    +  +G   N       I  +F++ + +  + +  ++
Subjt:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL

Arabidopsis top hitse value%identityAlignment
AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-1526.98Show/hide
Query:  LEKMSK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDV
        L+KM K + E D   Y  +I      +NV  A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF   I AF K   +
Subjt:  LEKMSK-ENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDV

Query:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWF
           E  Y          D+ TY +LI+G       D A   F+ M+     PN +  + +++GFCK K ++E  +    +  +G   N       I   F
Subjt:  NSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWF

Query:  ESGEAEGMEEILTKL
        ++G+ +  ++I  K+
Subjt:  ESGEAEGMEEILTKL

AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.2e-1424.78Show/hide
Query:  KKAQLALEWRLEKMSKENERDPD--FYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFY
        K+  + L   L K  ++ + +P    Y  +I      +NV  A+ +FT M+ +G++P V  +NSLI  C+ ++   +  S            PN  TF  
Subjt:  KKAQLALEWRLEKMSKENERDPD--FYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFY

Query:  FISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINW
         I AF K   +   E  Y          D+ TY +LI+G       D A   F+ M+     PN +  + +++GFCK K +DE  +    +  +G   N 
Subjt:  FISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINW

Query:  NVVEKFIPIWFESGEAEGMEEILTKL
              I  +F++ E +  + +  ++
Subjt:  NVVEKFIPIWFESGEAEGMEEILTKL

AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein6.3e-1225.54Show/hide
Query:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVK
        A+ +FT ME +GV+P V  ++SLI  C+ ++   +  S            PN  TF   I AF K   +   E  Y          D+ TY +LI+G   
Subjt:  AMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVK

Query:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL
            D A   F+ M+     PN +  + ++ GFCK K +DE  +    +  +G   N       I  +F++ + +  + +  ++
Subjt:  SKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-1221.4Show/hide
Query:  WKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS
        + AL+  L      K    A E   E + K    +   Y  LI +      + LA    T M  +G  P +   +SL++ C        A  ++  M   
Subjt:  WKALVTSLISSSSPKKAQLALEWRLEKMSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNS

Query:  ESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL
           +PN   +   +  F    ++    + +S       S ++RTY +LI+G  K    D AV  +++M+ SG  PN ++  NM+E  C+     E +  +
Subjt:  ESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFL

Query:  TVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR
         ++  +    +      FI    ++G  +  E++  ++ +  R
Subjt:  TVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKLNEAAR

AT5G41170.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.4e-1126.06Show/hide
Query:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIH
        +V  A+ +F  ME  G++P V  + SL+    +S     A S+   M      KP+  TF   I AF K       E  Y+       + ++ TY +LI+
Subjt:  NVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSAKRAFEFSADLRTYEALIH

Query:  GSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL
        G     C D A + F  M   G  P+ +   +++ GFCK K +D+  K    +  KG   N       I  + + G+    +E+ + +
Subjt:  GSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTAGCGCGAAACAGGGTTCTGGCATTGGCCAAAGGCGGTTCCTCCAGGGTTCCGCTACGGTTACAGGAACCTCATTATCGATGTATTTGCCGGAGATTT
GTTTCTACTGATCCGTCAAATTCGATTTTGAATCCTCTGGTTCTCAGGTTGATTCAGGAGCCAAGTTCGTCTGTGAAATCCGTGCTTGATTCGCCGGAAAATGCT
TTTCTCGGCAGTTCGCGGCTTTCCTGGAAAGCTCTTGTTACGTCTCTTATATCTTCTTCGTCGCCTAAGAAGGCTCAGCTGGCTTTGGAATGGAGATTGGAGAAA
ATGAGCAAAGAAAATGAGAGGGATCCCGACTTTTACATCGACCTAATACGTCTTTGCGGAGAGCTTCAGAATGTCCCTCTTGCAATGCGTGTCTTCACAGCTATG
GAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGTTTGTATATCTTCGCATAACATGATAACTGCCTTCAGCATGTTTGAAATAATG
AAAAATTCTGAAAGTTCTAAACCCAATGCTGACACTTTCTTCTATTTCATTTCGGCATTCGCCAAACGACACGATGTAAATTCCATGGAAGCATGGTATTCAGCC
AAAAGAGCGTTTGAATTCTCTGCTGATCTTCGAACCTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAGTGCTTTGACTTTGCTGTTAGATGTTTTGATGAA
ATGATGTTATCTGGCATTGTGCCCAACGCAATCATATTGGATAATATGCTTGAAGGGTTCTGTAAAAGGAAAGATTTGGATGAACTCAAGAAGTTCTTAACTGTT
GTGCTTGACAAAGGATGGGAGATCAATTGGAATGTGGTAGAGAAATTCATTCCGATATGGTTTGAATCTGGGGAGGCGGAAGGGATGGAGGAGATCCTTACCAAG
CTGAACGAAGCAGCTCGACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTAGCGCGAAACAGGGTTCTGGCATTGGCCAAAGGCGGTTCCTCCAGGGTTCCGCTACGGTTACAGGAACCTCATTATCGATGTATTTGCCGGAGATTT
GTTTCTACTGATCCGTCAAATTCGATTTTGAATCCTCTGGTTCTCAGGTTGATTCAGGAGCCAAGTTCGTCTGTGAAATCCGTGCTTGATTCGCCGGAAAATGCT
TTTCTCGGCAGTTCGCGGCTTTCCTGGAAAGCTCTTGTTACGTCTCTTATATCTTCTTCGTCGCCTAAGAAGGCTCAGCTGGCTTTGGAATGGAGATTGGAGAAA
ATGAGCAAAGAAAATGAGAGGGATCCCGACTTTTACATCGACCTAATACGTCTTTGCGGAGAGCTTCAGAATGTCCCTCTTGCAATGCGTGTCTTCACAGCTATG
GAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGTTTGTATATCTTCGCATAACATGATAACTGCCTTCAGCATGTTTGAAATAATG
AAAAATTCTGAAAGTTCTAAACCCAATGCTGACACTTTCTTCTATTTCATTTCGGCATTCGCCAAACGACACGATGTAAATTCCATGGAAGCATGGTATTCAGCC
AAAAGAGCGTTTGAATTCTCTGCTGATCTTCGAACCTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAGTGCTTTGACTTTGCTGTTAGATGTTTTGATGAA
ATGATGTTATCTGGCATTGTGCCCAACGCAATCATATTGGATAATATGCTTGAAGGGTTCTGTAAAAGGAAAGATTTGGATGAACTCAAGAAGTTCTTAACTGTT
GTGCTTGACAAAGGATGGGAGATCAATTGGAATGTGGTAGAGAAATTCATTCCGATATGGTTTGAATCTGGGGAGGCGGAAGGGATGGAGGAGATCCTTACCAAG
CTGAACGAAGCAGCTCGACTGTAA
Protein sequenceShow/hide protein sequence
MAVARNRVLALAKGGSSRVPLRLQEPHYRCICRRFVSTDPSNSILNPLVLRLIQEPSSSVKSVLDSPENAFLGSSRLSWKALVTSLISSSSPKKAQLALEWRLEK
MSKENERDPDFYIDLIRLCGELQNVPLAMRVFTAMEFQGVKPTVTAFNSLIEVCISSHNMITAFSMFEIMKNSESSKPNADTFFYFISAFAKRHDVNSMEAWYSA
KRAFEFSADLRTYEALIHGSVKSKCFDFAVRCFDEMMLSGIVPNAIILDNMLEGFCKRKDLDELKKFLTVVLDKGWEINWNVVEKFIPIWFESGEAEGMEEILTK
LNEAARL