| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7024563.1 RNA-binding protein CP33, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma] | 5.0e-162 | 100 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| XP_022937168.1 28 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata] | 1.4e-159 | 99.34 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M LVRLPCSSSSLFLRSNQQNLVFISPLS PQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| XP_022975867.1 28 kDa ribonucleoprotein, chloroplastic [Cucurbita maxima] | 3.4e-155 | 96.68 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M LVRLPCSSS LFLRSNQQNLVFI+PLS QNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPL SIRAKRTRKFVFQLASTSQDDA+ASSSSDAEEFSR
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEE SQS+DTSTDGVELASAAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| XP_023535968.1 28 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp. pepo] | 4.3e-158 | 98.34 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M LVRLPCSSSSLFLRSNQQNLVFISPLS PQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPL SIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTST+GVELASAAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| XP_038897887.1 31 kDa ribonucleoprotein, chloroplastic [Benincasa hispida] | 7.0e-140 | 87.38 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M LVRLPCSSSS FLRS QQ+L+F++PLS PQNPSY NGD LS+SRSS SL ST +GHNPL SIR KRT KFVFQ ASTSQD+AVASS SD+EEFS+
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW STPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGK FMGRSLRVARSKQFVKLPSEEKSQSED STD VELA+AAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LEN0 Uncharacterized protein | 4.0e-133 | 84.39 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M VRLPCSSSS LRS + +F++PLS QNPSY NGD LS+SRSS SL ST + H+PL SIRAKRT FVFQ ASTSQD+AV SS SD EEFS+
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDL+EFFDSGSGNVVSAQIIF+ENPRRSSGYGFVAFKTKKDAEAAISEFQGK FMGRSLRVARSKQFVKLPSEEK QSED STDGVELA+AAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| A0A1S3CS17 31 kDa ribonucleoprotein, chloroplastic | 3.0e-136 | 85.71 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M VRLPCSSSS LRS Q + +F++PLS QNPSY NGD LS+SRSS SL ST + HNPL SI AKRT KFVFQ ASTSQD+AV+SS SD EEFSR
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFVKLPSEEKSQSED STDGVELA+AAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| A0A5A7TBD1 31 kDa ribonucleoprotein | 3.0e-136 | 85.71 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M VRLPCSSSS LRS Q + +F++PLS QNPSY NGD LS+SRSS SL ST + HNPL SI AKRT KFVFQ ASTSQD+AV+SS SD EEFSR
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTL+LNYAK+KKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGRSLRVARSKQFVKLPSEEKSQSED STDGVELA+AAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| A0A6J1FF97 28 kDa ribonucleoprotein, chloroplastic-like | 6.5e-160 | 99.34 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M LVRLPCSSSSLFLRSNQQNLVFISPLS PQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| A0A6J1IE80 28 kDa ribonucleoprotein, chloroplastic | 1.7e-155 | 96.68 | Show/hide |
Query: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
M LVRLPCSSS LFLRSNQQNLVFI+PLS QNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPL SIRAKRTRKFVFQLASTSQDDA+ASSSSDAEEFSR
Subjt: MDLVRLPCSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDAEEFSRN
Query: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANL
Query: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEE SQS+DTSTDGVELASAAAE
Subjt: PFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
Query: V
V
Subjt: V
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P19682 28 kDa ribonucleoprotein, chloroplastic | 4.4e-20 | 32.45 | Show/hide |
Query: ASSSSDAEEFSRN-RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNK--IRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSP
A + + +E S + +L N+P+D E + LF++ G VV++ +YN+ R+RG FVTM + EEA AV Y+ GR L +N A + +P
Subjt: ASSSSDAEEFSRN-RLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNK--IRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSP
Query: PVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQ
+ T+ ++V N+P+D L + F S G VVSA+++F RS G+GFV ++ + AI+ G+ GR++RV +++
Subjt: PVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQ
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| P19683 31 kDa ribonucleoprotein, chloroplastic | 2.6e-20 | 32 | Show/hide |
Query: FVFQLASTSQDDAVASSSSDAEEFSR----NRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNK--IRNRGLAFVTMGSPEEALAAVNNLESYEFGG
FV + + D V + + EEF +L N+P+D E + LFE+ G VV++ +YN+ ++RG FVTM + EEA AV Y+ G
Subjt: FVFQLASTSQDDAVASSSSDAEEFSR----NRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNK--IRNRGLAFVTMGSPEEALAAVNNLESYEFGG
Query: RTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV
R L +N A + E+P P + ++ ++V N+P+ L + F S G VVSA++++ RS G+GFV ++ + AI+ G++ GR++RV
Subjt: RTLKLNYAKVKKEKPSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV
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| P19684 33 kDa ribonucleoprotein, chloroplastic | 2.4e-18 | 29.18 | Show/hide |
Query: CSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSS----SLFSTPL-GHNPLASIRAKRTRKFVFQLASTS---------QDDAVASSSSD
C S + ++ +L+++ + Q P +S + LSLS ++ + ST L H P++S+ R+ F+ AS S ++ VA S+ +
Subjt: CSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSS----SLFSTPL-GHNPLASIRAKRTRKFVFQLASTS---------QDDAVASSSSD
Query: AEEFSR------------NRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKV--
EE RL N+P+ T + +F + GTV +VE+ +Y+++ R+RG AFVTMGS EEA A+ + + GGRT+K+N+ +V
Subjt: AEEFSR------------NRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKV--
Query: --KKEKPSPPVKPNPVTF-----NLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLR--VA
++E S ++ F L+VANL + ++ LR+ F G +SA++I+ + RS G+GF+ F + + +A+ GR LR VA
Subjt: --KKEKPSPPVKPNPVTF-----NLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLR--VA
Query: RSKQFVKLPSEEKSQSEDTSTDGVELASA
K V P ++ E+ S D EL S+
Subjt: RSKQFVKLPSEEKSQSEDTSTDGVELASA
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| Q04836 31 kDa ribonucleoprotein, chloroplastic | 9.8e-20 | 32.8 | Show/hide |
Query: DDAVASSSSDAEEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNK--IRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEK
+ AV+ + E +L N+ +D + + LFE+ GTV E+ +YN+ ++RG FVTM S +EA AV Y+ GR L +N A + +
Subjt: DDAVASSSSDAEEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNK--IRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEK
Query: PSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV
P + F ++V NLP+D L + F S G VV A++++ RS G+GFV + AIS G+N GR++RV
Subjt: PSPPVKPNPVTFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV
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| Q39061 RNA-binding protein CP33, chloroplastic | 4.7e-22 | 27.72 | Show/hide |
Query: NPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKF--VFQLASTSQDDAVASSSSDAEEF----------------------SRNRLLAQNVP
NP S++ + +L + S NPL R +F + ++S DD + +S + EE RL N+P
Subjt: NPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKF--VFQLASTSQDDAVASSSSDAEEF----------------------SRNRLLAQNVP
Query: WDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKV----KKEKPSPPVKPNPVTF-----NLFV
+ T ++ +F + GTVVDV++ +Y+K+ R+RG FVTMGS EEA A+ S + GGRT+K+N+ +V + E ++ N ++ ++
Subjt: WDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKV----KKEKPSPPVKPNPVTF-----NLFV
Query: ANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV----ARSKQFVKLPSEEKSQSEDTSTDGVE
NL ++ ++ L++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GR+LR+ R K V PS E+ ++E+ S + E
Subjt: ANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV----ARSKQFVKLPSEEKSQSEDTSTDGVE
Query: LAS
+ S
Subjt: LAS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 6.5e-19 | 31.76 | Show/hide |
Query: FSTPLGHNPLASIRAKRTRKF-------VFQLASTSQDDAVASSSSDAEEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAF
FSTP PL +R+F +L +DD AS+ D +L N+P++ + + + + VE+ +YN+ ++RG AF
Subjt: FSTPLGHNPLASIRAKRTRKF-------VFQLASTSQDDAVASSSSDAEEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAF
Query: VTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKP-NPVT-FNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAF
VTM + E+ ++NL+ E+ GR LK+N+A +KP P +P P T LFV NL + ++ L F G+VV A+++F + RS GYGFV +
Subjt: VTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKPSPPVKP-NPVT-FNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAF
Query: KTKKDAEAAISEFQGKNFMGRSLRV--ARSKQF
+K + E A+ G GR++RV A+ K+F
Subjt: KTKKDAEAAISEFQGKNFMGRSLRV--ARSKQF
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| AT2G35410.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 8.8e-32 | 33.33 | Show/hide |
Query: SYSNNGDIKLSLSRSSSSLFST------PLGHNPLASIR--AKRTRKFVFQLASTSQDDAVASSSSDAEEFS--------RNRLLAQNVPWDSTPEDIRS
S S++ S+ SSSL T P +P+ S+R + +R+ V L S ++ + A + EE + + +L N+PW + DI
Subjt: SYSNNGDIKLSLSRSSSSLFST------PLGHNPLASIR--AKRTRKFVFQLASTSQDDAVASSSSDAEEFS--------RNRLLAQNVPWDSTPEDIRS
Query: LFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYA-KVKKEKPS-----PPVKPNPVTFNLFVANLPFDARAKDLREF
LF + GTV +VE+ +NRG AFVTM S EEA AA++ ++++ GR + +++A + KK P P P L+V+NL + AR+ LRE
Subjt: LFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYA-KVKKEKPS-----PPVKPNPVTFNLFVANLPFDARAKDLREF
Query: FDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
F + N VSA+++F + RSSGYGFV+F T+++AE AI++ GK MGR + L +S SE D VE +A+ +
Subjt: FDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKLPSEEKSQSEDTSTDGVELASAAAE
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| AT3G52380.1 chloroplast RNA-binding protein 33 | 3.3e-23 | 27.72 | Show/hide |
Query: NPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKF--VFQLASTSQDDAVASSSSDAEEF----------------------SRNRLLAQNVP
NP S++ + +L + S NPL R +F + ++S DD + +S + EE RL N+P
Subjt: NPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKF--VFQLASTSQDDAVASSSSDAEEF----------------------SRNRLLAQNVP
Query: WDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKV----KKEKPSPPVKPNPVTF-----NLFV
+ T ++ +F + GTVVDV++ +Y+K+ R+RG FVTMGS EEA A+ S + GGRT+K+N+ +V + E ++ N ++ ++
Subjt: WDSTPEDIRSLFEKYGTVVDVELSMYNKI--RNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKV----KKEKPSPPVKPNPVTF-----NLFV
Query: ANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV----ARSKQFVKLPSEEKSQSEDTSTDGVE
NL ++ ++ L++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GR+LR+ R K V PS E+ ++E+ S + E
Subjt: ANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRV----ARSKQFVKLPSEEKSQSEDTSTDGVE
Query: LAS
+ S
Subjt: LAS
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| AT4G09040.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.3e-71 | 52.44 | Show/hide |
Query: MDLVRLP-CSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDA-----
M L+RLP S L +SNQ+N N +++N+ SLS S+ SL SI AK +R ++T+Q+ + SSSS +
Subjt: MDLVRLP-CSSSSLFLRSNQQNLVFISPLSWPQNPSYSNNGDIKLSLSRSSSSLFSTPLGHNPLASIRAKRTRKFVFQLASTSQDDAVASSSSDA-----
Query: --EEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKP-SPPVKPNPV
EE S+ RL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M SPEEA A+ +LES E+ GR LK++YAK KK+K +P P+PV
Subjt: --EEFSRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKP-SPPVKPNPV
Query: -TFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKL-------PSEEKSQ
TFNLFVANL F+ARAK L+EFFD+ +GNVVS ++IFHENPRRSSGYGFV+FKTKK AEAA+ EFQGK+F+GR +R+A+SKQFVKL P EE+++
Subjt: -TFNLFVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKL-------PSEEKSQ
Query: SEDTSTD
E + ++
Subjt: SEDTSTD
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| AT4G09040.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 2.6e-68 | 63.86 | Show/hide |
Query: SRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKP-SPPVKPNPV-TFNL
S+ RL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M SPEEA A+ +LES E+ GR LK++YAK KK+K +P P+PV TFNL
Subjt: SRNRLLAQNVPWDSTPEDIRSLFEKYGTVVDVELSMYNKIRNRGLAFVTMGSPEEALAAVNNLESYEFGGRTLKLNYAKVKKEKP-SPPVKPNPV-TFNL
Query: FVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKL-------PSEEKSQSEDTS
FVANL F+ARAK L+EFFD+ +GNVVS ++IFHENPRRSSGYGFV+FKTKK AEAA+ EFQGK+F+GR +R+A+SKQFVKL P EE+++ E +
Subjt: FVANLPFDARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKNFMGRSLRVARSKQFVKL-------PSEEKSQSEDTS
Query: TD
++
Subjt: TD
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