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Carg03015 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03015
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:3006250..3010906
RNA-Seq ExpressionCarg03015
SyntenyCarg03015
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591706.1 hypothetical protein SDJN03_14052, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2791.43Show/hide
Query:  SSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFKLFLV
        S QFDHFLHRHGISPRKIVLRSVWLAL REEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFK+ ++
Subjt:  SSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFKLFLV

KAG7024588.1 hypothetical protein SDJN02_13406, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-42100Show/hide
Query:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFKLFLVPHGLVAVAG
        MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFKLFLVPHGLVAVAG
Subjt:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFKLFLVPHGLVAVAG

XP_022975998.1 uncharacterized protein LOC111476529 isoform X1 [Cucurbita maxima]1.3e-2888.31Show/hide
Query:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFK
        +QLSLYSAIFM SQFDHFLH+HGIS RKIVLRSVWLALIREEKKTE  ESPSSTVPLCLRITRLL QFT+VEQERF+
Subjt:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFK

XP_022975999.1 uncharacterized protein LOC111476529 isoform X2 [Cucurbita maxima]3.6e-2385.71Show/hide
Query:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTL
        +QLSLYSAIFM SQFDHFLH+HGIS RKIVLRSVWLALIREEKKTE  ESPSSTVPLCLRIT L  +FTL
Subjt:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTL

TrEMBL top hitse value%identityAlignment
A0A6J1IKU1 uncharacterized protein LOC111476529 isoform X16.1e-2988.31Show/hide
Query:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFK
        +QLSLYSAIFM SQFDHFLH+HGIS RKIVLRSVWLALIREEKKTE  ESPSSTVPLCLRITRLL QFT+VEQERF+
Subjt:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFK

A0A6J1IM83 uncharacterized protein LOC111476529 isoform X21.7e-2385.71Show/hide
Query:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTL
        +QLSLYSAIFM SQFDHFLH+HGIS RKIVLRSVWLALIREEKKTE  ESPSSTVPLCLRIT L  +FTL
Subjt:  MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTGAGCTTGTATTCTGCTATTTTTATGTCTTCTCAGTTCGATCACTTCCTGCATCGGCATGGAATATCGCCTCGGAAGATAGTTCTCAGATCTGTTTGGTTAGC
TTTAATCCGCGAGGAGAAGAAAACTGAAAAAGGCGAGAGTCCGAGTTCAACTGTTCCTCTGTGCCTGCGGATTACCAGACTGCTGGGACAGTTTACTCTAGTCGAGCAAG
AGAGATTCAAGCTCTTTCTGGTGCCTCATGGTCTTGTGGCTGTGGCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTGAGCTTGTATTCTGCTATTTTTATGTCTTCTCAGTTCGATCACTTCCTGCATCGGCATGGAATATCGCCTCGGAAGATAGTTCTCAGATCTGTTTGGTTAGC
TTTAATCCGCGAGGAGAAGAAAACTGAAAAAGGCGAGAGTCCGAGTTCAACTGTTCCTCTGTGCCTGCGGATTACCAGACTGCTGGGACAGTTTACTCTAGTCGAGCAAG
AGAGATTCAAGCTCTTTCTGGTGCCTCATGGTCTTGTGGCTGTGGCTGGCTGA
Protein sequenceShow/hide protein sequence
MQLSLYSAIFMSSQFDHFLHRHGISPRKIVLRSVWLALIREEKKTEKGESPSSTVPLCLRITRLLGQFTLVEQERFKLFLVPHGLVAVAG