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Carg03021 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03021
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationCarg_Chr09:3048043..3048821
RNA-Seq ExpressionCarg03021
SyntenyCarg03021
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037699 - Uncharacterized protein At5g65660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]7.9e-72100Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
        MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF

Query:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
        IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
Subjt:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN

XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]5.1e-7199.24Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
        MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF

Query:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
        IAMACPPCGAAPLVEIVIQKPSQSIS ALPSN
Subjt:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN

XP_022975977.1 uncharacterized protein At5g65660-like [Cucurbita maxima]7.4e-7097.73Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
        MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH+DH HPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF

Query:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
        IAMACPPCGAAPLVEIVIQKPSQSIS ALPSN
Subjt:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN

XP_023536259.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]2.8e-6997.73Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
        MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRP SLTVLMPGDEVPRF
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF

Query:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
        IAMACPPC AAPLVEIVIQKPSQSIS ALPSN
Subjt:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN

XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]3.2e-5783.72Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHT-IWKENRPESLTVLMPGDEVPR
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH  H HP IPP+T AFSPPDK SPIHT IW+ENRP+SL+VLMPGDEVPR
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHT-IWKENRPESLTVLMPGDEVPR

Query:  FIAMACPPCGAAPLVEIVIQKPSQSISEA
        FIAMACPPC AA LVEIV+QKPSQS  ++
Subjt:  FIAMACPPCGAAPLVEIVIQKPSQSISEA

TrEMBL top hitse value%identityAlignment
A0A1S3CQS4 uncharacterized protein At5g65660-like4.3e-5581.06Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPP--ETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVP
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRS LGCPDH  H HP IPP     A SPPDKFSPIHTIWKENRP+S++VLMPGDEVP
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPP--ETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVP

Query:  RFIAMACPPC--GAAPLVEIVIQKPSQSISEA
        RFIA+ACPPC   AA LVEIV+QKPSQSIS++
Subjt:  RFIAMACPPC--GAAPLVEIVIQKPSQSISEA

A0A5D3E545 Uncharacterized protein4.3e-5581.06Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPP--ETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVP
        MEYD+REAQD ASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRS LGCPDH  H HP IPP     A SPPDKFSPIHTIWKENRP+S++VLMPGDEVP
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPP--ETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVP

Query:  RFIAMACPPC--GAAPLVEIVIQKPSQSISEA
        RFIA+ACPPC   AA LVEIV+QKPSQSIS++
Subjt:  RFIAMACPPC--GAAPLVEIVIQKPSQSISEA

A0A6J1CGJ4 uncharacterized protein At5g65660-like2.2e-4369.17Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRH-PSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPR
        M+YDDREAQD ASLSFPVGLVLLLTF FCMCCFFSCCLHW+KLRS LGCP   DHRH P IPPE  A SPPDK  P+HT    N+ +SL V+MPGDE PR
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRH-PSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPR

Query:  FIAMACPPC----GAAPLVEIVIQKPSQSISEA
        FIAMACPPC     AAP V++++QKP QS  ++
Subjt:  FIAMACPPC----GAAPLVEIVIQKPSQSISEA

A0A6J1F906 uncharacterized protein At5g65660-like2.5e-7199.24Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
        MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF

Query:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
        IAMACPPCGAAPLVEIVIQKPSQSIS ALPSN
Subjt:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN

A0A6J1IEI5 uncharacterized protein At5g65660-like3.6e-7097.73Show/hide
Query:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
        MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH+DH HPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF
Subjt:  MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRF

Query:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN
        IAMACPPCGAAPLVEIVIQKPSQSIS ALPSN
Subjt:  IAMACPPCGAAPLVEIVIQKPSQSISEALPSN

SwissProt top hitse value%identityAlignment
Q9LSK9 Uncharacterized protein At5g656609.0e-1037.17Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRFIAMACPPCGAAP
        SL FP+G  LLL  +F +   FSCC HW+K RS+        +  PS   E+  + P   F  +    K+ +  S+ VLMPGD  P+FIA+ CP     P
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRFIAMACPPCGAAP

Query:  -LVEIVIQKPSQS
          + + +Q P QS
Subjt:  -LVEIVIQKPSQS

Arabidopsis top hitse value%identityAlignment
AT5G65660.1 hydroxyproline-rich glycoprotein family protein6.4e-1137.17Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRFIAMACPPCGAAP
        SL FP+G  LLL  +F +   FSCC HW+K RS+        +  PS   E+  + P   F  +    K+ +  S+ VLMPGD  P+FIA+ CP     P
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRFIAMACPPCGAAP

Query:  -LVEIVIQKPSQS
          + + +Q P QS
Subjt:  -LVEIVIQKPSQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACGATGACCGCGAAGCACAGGATTCCGCCTCTCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTG
TCTTCACTGGGAAAAGCTCCGATCAATTCTCGGCTGTCCCGATCACGCCGACCACCGTCATCCTTCTATTCCGCCGGAAACCCCCGCCTTTTCGCCGCCTGATAAATTCT
CCCCAATCCATACGATATGGAAGGAGAATCGGCCGGAAAGTCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCATGTCCGCCGTGTGGGGCG
GCGCCGTTGGTAGAAATTGTAATACAGAAACCTTCTCAGAGTATTTCTGAAGCTCTCCCTTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
TAAAATAAAATATTTTTGTGCATAAATTGAATTGTCATCAACAAATCTGCAGAATTTGATCGGAGGAAGATCGAGAGATACAAGAAATGGAGTACGATGACCGCGAAGCA
CAGGATTCCGCCTCTCTGAGTTTTCCAGTTGGTTTGGTTCTTTTGTTGACGTTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATC
AATTCTCGGCTGTCCCGATCACGCCGACCACCGTCATCCTTCTATTCCGCCGGAAACCCCCGCCTTTTCGCCGCCTGATAAATTCTCCCCAATCCATACGATATGGAAGG
AGAATCGGCCGGAAAGTCTGACGGTGTTGATGCCCGGCGACGAGGTTCCGAGGTTTATAGCAATGGCATGTCCGCCGTGTGGGGCGGCGCCGTTGGTAGAAATTGTAATA
CAGAAACCTTCTCAGAGTATTTCTGAAGCTCTCCCTTCAAATTAATGTCGTTTTTGTTCATATGAATTTGAATATTCCATTATTCCTTTGGAATTTGTAGCAATGTTCAA
ATATTTCTCTTAATTAATTCCTAATATGTACATGGAGAAATTCTGTTTTTGG
Protein sequenceShow/hide protein sequence
MEYDDREAQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDHADHRHPSIPPETPAFSPPDKFSPIHTIWKENRPESLTVLMPGDEVPRFIAMACPPCGA
APLVEIVIQKPSQSISEALPSN