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Carg03026 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03026
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionamino acid permease 6-like
Genome locationCarg_Chr09:3096069..3096610
RNA-Seq ExpressionCarg03026
SyntenyCarg03026
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591718.1 hypothetical protein SDJN03_14064, partial [Cucurbita argyrosperma subsp. sororia]2.2e-77100Show/hide
Query:  MAAHRLPKNSPKAALGFDKNFDHDGQCLHCLSIYNWCLPGLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLNYFPIEVYLARTKLPRFSFT
        MAAHRLPKNSPKAALGFDKNFDHDGQCLHCLSIYNWCLPGLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLNYFPIEVYLARTKLPRFSFT
Subjt:  MAAHRLPKNSPKAALGFDKNFDHDGQCLHCLSIYNWCLPGLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLNYFPIEVYLARTKLPRFSFT

Query:  CIWPEDIELELDPFKAWPKMSRHTNPSKLELISTKS
        CIWPEDIELELDPFKAWPKMSRHTNPSKLELISTKS
Subjt:  CIWPEDIELELDPFKAWPKMSRHTNPSKLELISTKS
XP_004136237.1 amino acid permease 6 [Cucumis sativus]2.7e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ES F+T EH+INLPFNGEYQLN                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFS T IW
Subjt:  PIEVYLARTKLPRFSFTCIW
XP_008466098.1 PREDICTED: amino acid permease 6 [Cucumis melo]7.8e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ES F+T EH INLPFNGEYQLN                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFS T IW
Subjt:  PIEVYLARTKLPRFSFTCIW
XP_022159715.1 amino acid permease 6-like [Momordica charantia]4.6e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ESKF+T EH INLPF+GEYQL+                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        PIE+Y+ARTKLPRFSFT  W
Subjt:  PIEVYLARTKLPRFSFTCIW
XP_038896751.1 amino acid permease 6-like [Benincasa hispida]1.2e-0635.83Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ESKF+T EH INLPFNGEYQLN                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFS T IW
Subjt:  PIEVYLARTKLPRFSFTCIW
TrEMBL top hitse value%identityAlignment
A0A0A0LE46 Aa_trans domain-containing protein1.3e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ES F+T EH+INLPFNGEYQLN                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFS T IW
Subjt:  PIEVYLARTKLPRFSFTCIW
A0A1S3CQR5 amino acid permease 63.8e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ES F+T EH INLPFNGEYQLN                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFS T IW
Subjt:  PIEVYLARTKLPRFSFTCIW
A0A5A7TAP3 Amino acid permease 63.8e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ES F+T EH INLPFNGEYQLN                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFS T IW
Subjt:  PIEVYLARTKLPRFSFTCIW
A0A6J1DZJ0 amino acid permease 6-like2.2e-0635Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ESKF+T EH INLPF+GEYQL+                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        PIE+Y+ARTKLPRFSFT  W
Subjt:  PIEVYLARTKLPRFSFTCIW
A0A6J1FRQ3 amino acid permease 6-like4.9e-0634.17Show/hide
Query:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF
        +H +  Y  +C P  G +   C   W         ESKF+T EH I LPFNGEY L+                                         YF
Subjt:  LHCLSIYN-WCLP--GLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLN-----------------------------------------YF

Query:  PIEVYLARTKLPRFSFTCIW
        P+E+Y+ARTKLPRFSFT IW
Subjt:  PIEVYLARTKLPRFSFTCIW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCACATCGATTGCCTAAGAATTCCCCCAAAGCTGCTCTCGGTTTCGACAAGAACTTTGACCACGATGGCCAATGTCTGCATTGCTTGTCCATCTATAATTGGTG
CTTACCAGGTCTTCTGCCAACCTGTTGTATGGCTTTATGGATAAATGGTGCAGCACAAAGTGGGCAGGAAAGTAAATTCATGACAAAGGAGCACAGTATTAACTTACCTT
TTAATGGAGAGTATCAGCTCAACTACTTCCCCATAGAGGTGTACTTAGCAAGAACTAAATTGCCCAGATTCTCTTTCACCTGCATCTGGCCTGAAGATATTGAGCTCGAG
CTGGATCCATTCAAGGCTTGGCCCAAGATGTCAAGACATACAAACCCTTCAAAACTTGAACTGATTAGTACAAAATCCTAG
mRNA sequenceShow/hide mRNA sequence
TATCATACTTCTTCCCCTTCACTTCCCATTCCACCCCTCGATGGCTGCACATCGATTGCCTAAGAATTCCCCCAAAGCTGCTCTCGGTTTCGACAAGAACTTTGACCACG
ATGGCCAATGTCTGCATTGCTTGTCCATCTATAATTGGTGCTTACCAGGTCTTCTGCCAACCTGTTGTATGGCTTTATGGATAAATGGTGCAGCACAAAGTGGGCAGGAA
AGTAAATTCATGACAAAGGAGCACAGTATTAACTTACCTTTTAATGGAGAGTATCAGCTCAACTACTTCCCCATAGAGGTGTACTTAGCAAGAACTAAATTGCCCAGATT
CTCTTTCACCTGCATCTGGCCTGAAGATATTGAGCTCGAGCTGGATCCATTCAAGGCTTGGCCCAAGATGTCAAGACATACAAACCCTTCAAAACTTGAACTGATTAGTA
CAAAATCCTAG
Protein sequenceShow/hide protein sequence
MAAHRLPKNSPKAALGFDKNFDHDGQCLHCLSIYNWCLPGLLPTCCMALWINGAAQSGQESKFMTKEHSINLPFNGEYQLNYFPIEVYLARTKLPRFSFTCIWPEDIELE
LDPFKAWPKMSRHTNPSKLELISTKS