; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03043
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondehydration-responsive element-binding protein 3-like
Genome locationCarg_Chr09:3186595..3187194
RNA-Seq ExpressionCarg03043
SyntenyCarg03043
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591735.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]2.0e-10698.5Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSY-NNNNNNNNIIDEMGIGDSNFLWDY
        RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRT+DDSSY NNNNNNNNIID+MGIGDSNFLWDY
Subjt:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSY-NNNNNNNNIIDEMGIGDSNFLWDY

KAG7024616.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-108100Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY
        RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY
Subjt:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY

XP_022936152.1 dehydration-responsive element-binding protein 3-like [Cucurbita moschata]1.1e-10699.5Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY
        RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSY NNNNNNNIIDEMGIGDSNFLWDY
Subjt:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY

XP_022976323.1 dehydration-responsive element-binding protein 3-like [Cucurbita maxima]4.1e-10495.12Show/hide
Query:  MSATQPSQITQPSSSDT------NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPE
        MSATQPSQITQPSSSDT      NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSA LNFPE
Subjt:  MSATQPSQITQPSSSDT------NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPE

Query:  LAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSN
        LAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSL+TNYLNNEFVLMDSTDGWVYPPPWLRTMDD SY NNNNNNNIIDEMGIGDSN
Subjt:  LAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSN

Query:  FLWDY
        FLWDY
Subjt:  FLWDY

XP_023535238.1 dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo]1.5e-10195.48Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY
        RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDD SYN+N+      DEMGIGDSNFLWDY
Subjt:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY

TrEMBL top hitse value%identityAlignment
A0A0A0LHV3 AP2 domain class transcription factor1.2e-6467.91Show/hide
Query:  TQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRD
        TQP+   +   +N NNKRVR S    +YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRD
Subjt:  TQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRD

Query:  VQAAAAKAAHMD-PFQYST------------------DDSDELSEIVKLPSL-TTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMG
        +QAAA+KAAHMD  F YS+                  +D  ELSEIVKLP+L ++NY ++EFVLMDST+GWVYPPPWLRTM+D  Y  + NN N  DE+G
Subjt:  VQAAAAKAAHMD-PFQYST------------------DDSDELSEIVKLPSL-TTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMG

Query:  -IGD----SNFLWDY
         IGD    SN  WDY
Subjt:  -IGD----SNFLWDY

A0A6J1F7M6 dehydration-responsive element-binding protein 3-like5.6e-10799.5Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY
        RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSY NNNNNNNIIDEMGIGDSNFLWDY
Subjt:  RPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY

A0A6J1FNI3 dehydration-responsive element-binding protein 3-like1.3e-6673.82Show/hide
Query:  MSATQ--PSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG-NSAILNFPELAH
        MS T+  P+Q   P+SS++++ S    KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG NSAILNFPELAH
Subjt:  MSATQ--PSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG-NSAILNFPELAH

Query:  SLPRPVSFAPRDVQAAAAKAAHMDPFQYST-----DDSDELSEIVKLPSLTTNY----LNNEFVLMDSTDG-WVYPPPWLRTMDDSSYNNN
        SLPRP SFAPRD+QAAAAKAAHMDP QYS      DDSD+L+EI+KLP+L TNY     NNEFVLMDS++  W YPPPW+RTM+D++ + N
Subjt:  SLPRPVSFAPRDVQAAAAKAAHMDPFQYST-----DDSDELSEIVKLPSLTTNY----LNNEFVLMDSTDG-WVYPPPWLRTMDDSSYNNN

A0A6J1ILS4 dehydration-responsive element-binding protein 3-like2.0e-10495.12Show/hide
Query:  MSATQPSQITQPSSSDT------NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPE
        MSATQPSQITQPSSSDT      NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSA LNFPE
Subjt:  MSATQPSQITQPSSSDT------NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPE

Query:  LAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSN
        LAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSL+TNYLNNEFVLMDSTDGWVYPPPWLRTMDD SY NNNNNNNIIDEMGIGDSN
Subjt:  LAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSN

Query:  FLWDY
        FLWDY
Subjt:  FLWDY

A0A6J1J127 dehydration-responsive element-binding protein 3-like1.1e-6575Show/hide
Query:  ITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG-NSAILNFPELAHSLPRPVSFAP
        ++Q     T + S  ++KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG NSAILNFPELAHSLPRP SFAP
Subjt:  ITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG-NSAILNFPELAHSLPRPVSFAP

Query:  RDVQAAAAKAAHMDPFQYST----DDSDELSEIVKLPSLTTNY----LNNEFVLMDSTDG-WVYPPPWLRTMDDSSYNNN
        RD+QAAAAKAAHMDP QYS     DDSD+L+EI+KLP+L TNY     NNEFVLMDS++  W YPPPW+RTM+D++ + N
Subjt:  RDVQAAAAKAAHMDPFQYST----DDSDELSEIVKLPSLTTNY----LNNEFVLMDSTDG-WVYPPPWLRTMDDSSYNNN

SwissProt top hitse value%identityAlignment
O80654 Ethylene-responsive transcription factor ERF0374.5e-3746.88Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        +S  Q S + +      + Q +      +     P YRGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMD-------------------------PFQYST--------------DDSDELSEIVKLPSLTTNYLN--NEFVLMDSTDG
        RP S +PRDVQAAAA AA MD                            YST                ++ELSEIV+LPSL T+Y    +EFV +DS   
Subjt:  RPVSFAPRDVQAAAAKAAHMD-------------------------PFQYST--------------DDSDELSEIVKLPSLTTNYLN--NEFVLMDSTDG

Query:  WVYPP--PWLRTMDDSSYNNNNNN
          YPP  PW      S Y +++ N
Subjt:  WVYPP--PWLRTMDDSSYNNNNNN

Q39127 Ethylene-responsive transcription factor TINY7.3e-4856.02Show/hide
Query:  SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVS
        S+ T+   +    Q N   K+  V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP S
Subjt:  SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVS

Query:  FAPRDVQAAAAKAAHMDPFQ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMDSTDGWVYPPPW
         +PRD+Q AA KAAHM+  Q                         S   S+EL EIV+LPSL ++Y     L NEF+  DS D W YPP W
Subjt:  FAPRDVQAAAAKAAHMDPFQ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMDSTDGWVYPPPW

Q52QU1 Ethylene-responsive transcription factor ERF0425.6e-4046.7Show/hide
Query:  SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAA
        SDT   S    ++ ++     +YRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAARAHDVAALSIKG+SAILNFPELA  LPRPVS + +D+QAAA
Subjt:  SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAA

Query:  AKAAHMD----PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWL-RTMDD
        A+AA MD    PF    D                                      S EL +IV+LPSL  N +  +  L DS +G V  PPWL  T +D
Subjt:  AKAAHMD----PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWL-RTMDD

Query:  SSYNNNNNNNNIIDEMGIGDSNFLWDY
          Y     +++++ +  + +S FLW+Y
Subjt:  SSYNNNNNNNNIIDEMGIGDSNFLWDY

Q9LYD3 Dehydration-responsive element-binding protein 32.9e-5257.79Show/hide
Query:  SQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFA
        S+    S      QS    KR RDS KHP+YRGVRMR WGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG +AILNFPELA S PRPVS +
Subjt:  SQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFA

Query:  PRDVQAAAAKAAHMDP---FQYSTD-----------------------DSDELSEIVKLPSLTTNY------LNNEFVLMDSTDGWVYPPPWLRTMDDS
        PRD+Q AA KAAHM+P   F  ST                        +S+EL EIV+LPSL  +Y      L NEFV  DS D  +YPPPW ++ +D+
Subjt:  PRDVQAAAAKAAHMDP---FQYSTD-----------------------DSDELSEIVKLPSLTTNY------LNNEFVLMDSTDGWVYPPPWLRTMDDS

Q9M080 Ethylene-responsive transcription factor ERF0431.3e-4450.74Show/hide
Query:  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD--
        ++K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SIKG SAILNFPEL+  LPRPVS +PRDV+AAA KAA MD  
Subjt:  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD--

Query:  --PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNN
           F+  T+                                      SD+L EIVKLPSL T+   +NEFV+ DS +  VY P WL   ++  +  NNN+
Subjt:  --PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNN

Query:  NNI
        +++
Subjt:  NNI

Arabidopsis top hitse value%identityAlignment
AT1G77200.1 Integrase-type DNA-binding superfamily protein3.2e-3846.88Show/hide
Query:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP
        +S  Q S + +      + Q +      +     P YRGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LP
Subjt:  MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLP

Query:  RPVSFAPRDVQAAAAKAAHMD-------------------------PFQYST--------------DDSDELSEIVKLPSLTTNYLN--NEFVLMDSTDG
        RP S +PRDVQAAAA AA MD                            YST                ++ELSEIV+LPSL T+Y    +EFV +DS   
Subjt:  RPVSFAPRDVQAAAAKAAHMD-------------------------PFQYST--------------DDSDELSEIVKLPSLTTNYLN--NEFVLMDSTDG

Query:  WVYPP--PWLRTMDDSSYNNNNNN
          YPP  PW      S Y +++ N
Subjt:  WVYPP--PWLRTMDDSSYNNNNNN

AT2G25820.1 Integrase-type DNA-binding superfamily protein4.0e-4146.7Show/hide
Query:  SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAA
        SDT   S    ++ ++     +YRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAARAHDVAALSIKG+SAILNFPELA  LPRPVS + +D+QAAA
Subjt:  SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAA

Query:  AKAAHMD----PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWL-RTMDD
        A+AA MD    PF    D                                      S EL +IV+LPSL  N +  +  L DS +G V  PPWL  T +D
Subjt:  AKAAHMD----PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWL-RTMDD

Query:  SSYNNNNNNNNIIDEMGIGDSNFLWDY
          Y     +++++ +  + +S FLW+Y
Subjt:  SSYNNNNNNNNIIDEMGIGDSNFLWDY

AT4G32800.1 Integrase-type DNA-binding superfamily protein9.2e-4650.74Show/hide
Query:  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD--
        ++K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SIKG SAILNFPEL+  LPRPVS +PRDV+AAA KAA MD  
Subjt:  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD--

Query:  --PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNN
           F+  T+                                      SD+L EIVKLPSL T+   +NEFV+ DS +  VY P WL   ++  +  NNN+
Subjt:  --PFQYSTDD-------------------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNN

Query:  NNI
        +++
Subjt:  NNI

AT5G11590.1 Integrase-type DNA-binding superfamily protein2.0e-5357.79Show/hide
Query:  SQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFA
        S+    S      QS    KR RDS KHP+YRGVRMR WGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG +AILNFPELA S PRPVS +
Subjt:  SQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFA

Query:  PRDVQAAAAKAAHMDP---FQYSTD-----------------------DSDELSEIVKLPSLTTNY------LNNEFVLMDSTDGWVYPPPWLRTMDDS
        PRD+Q AA KAAHM+P   F  ST                        +S+EL EIV+LPSL  +Y      L NEFV  DS D  +YPPPW ++ +D+
Subjt:  PRDVQAAAAKAAHMDP---FQYSTD-----------------------DSDELSEIVKLPSLTTNY------LNNEFVLMDSTDGWVYPPPWLRTMDDS

AT5G25810.1 Integrase-type DNA-binding superfamily protein5.2e-4956.02Show/hide
Query:  SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVS
        S+ T+   +    Q N   K+  V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP S
Subjt:  SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVS

Query:  FAPRDVQAAAAKAAHMDPFQ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMDSTDGWVYPPPW
         +PRD+Q AA KAAHM+  Q                         S   S+EL EIV+LPSL ++Y     L NEF+  DS D W YPP W
Subjt:  FAPRDVQAAAAKAAHMDPFQ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMDSTDGWVYPPPW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCAACACAACCATCACAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTA
CCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACCCCAGAGATGGCCGCTA
GAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCCGTCTCCTTCGCCCCTCGCGACGTT
CAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCT
TAATAACGAGTTTGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCGTGGTTACGAACCATGGACGATTCCAGCTACAACAACAATAACAACAACAACAACA
TTATCGACGAAATGGGAATCGGAGACAGTAATTTCTTATGGGATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCAACACAACCATCACAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTA
CCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACCCCAGAGATGGCCGCTA
GAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCCGTCTCCTTCGCCCCTCGCGACGTT
CAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCT
TAATAACGAGTTTGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCGTGGTTACGAACCATGGACGATTCCAGCTACAACAACAATAACAACAACAACAACA
TTATCGACGAAATGGGAATCGGAGACAGTAATTTCTTATGGGATTATTAA
Protein sequenceShow/hide protein sequence
MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDV
QAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNNIIDEMGIGDSNFLWDY