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Carg03054 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03054
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:3236915..3237586
RNA-Seq ExpressionCarg03054
SyntenyCarg03054
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591743.1 Synaptonemal complex protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2293.55Show/hide
Query:  LLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC
        L+ L  GTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC
Subjt:  LLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC
KAG7024626.1 hypothetical protein SDJN02_13444 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-36100Show/hide
Query:  MNISVPLLRHGSWDTWLLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC
        MNISVPLLRHGSWDTWLLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC
Subjt:  MNISVPLLRHGSWDTWLLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC
XP_023536239.1 uncharacterized protein LOC111797469 [Cucurbita pepo subsp. pepo]6.2e-2485.07Show/hide
Query:  MNISVPLLRHGSWDTWLLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGL
        MNISVP+LRHGSWD+WLLPLPSGTASIEIELIAR AMGIDREIEKFA DVYRTENAAYA + +G  L
Subjt:  MNISVPLLRHGSWDTWLLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATTTCAGTACCTCTTCTACGCCATGGCTCATGGGACACTTGGTTACTGCCTCTCCCTTCAGGTACTGCATCCATTGAAATTGAACTTATAGCTCGGACGGCCAT
GGGGATTGACAGAGAAATTGAGAAGTTCGCCGCGGATGTTTACAGGACTGAGAATGCTGCGTATGCTTTTGTTGAGATTGGGTGTGGACTTGAATGTTTCTCATCTCAGG
AAACAGTTCTATGTTGA
mRNA sequenceShow/hide mRNA sequence
ACTAATTTATTGAAGTTACTCCGGAAAGAGAATTCCAATTGGAGTTTGGACATGGGGTTAGTGAAAAAAACACAAGCTTTATGATTGTTGGACGATTGAGTGTGTTCGGA
AGTACTGTTGAAACACTTTTGGTTGTCTAAGATTATTGTTGGTCTTAAACAAGTTACGCAGAGCAGGTAAGTGACAGCCAAGATCTGGATTGAAATATACCAACAACCTG
TATTTTCATATTCGAGCAAAGTTTCAAATGAACATTTCAGTACCTCTTCTACGCCATGGCTCATGGGACACTTGGTTACTGCCTCTCCCTTCAGGTACTGCATCCATTGA
AATTGAACTTATAGCTCGGACGGCCATGGGGATTGACAGAGAAATTGAGAAGTTCGCCGCGGATGTTTACAGGACTGAGAATGCTGCGTATGCTTTTGTTGAGATTGGGT
GTGGACTTGAATGTTTCTCATCTCAGGAAACAGTTCTATGTTGA
Protein sequenceShow/hide protein sequence
MNISVPLLRHGSWDTWLLPLPSGTASIEIELIARTAMGIDREIEKFAADVYRTENAAYAFVEIGCGLECFSSQETVLC