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Carg03071 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03071
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:3325121..3326017
RNA-Seq ExpressionCarg03071
SyntenyCarg03071
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591761.1 hypothetical protein SDJN03_14107, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2688.31Show/hide
Query:  ELLLF---SNLESNLYIIAIAFFCGQASKLCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESA
        ELL F     L ++LYIIAIAFFCGQASKLCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESA
Subjt:  ELLLF---SNLESNLYIIAIAFFCGQASKLCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESA

KAG6608068.1 Beta-1,3-galactosyltransferase 7, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0434.94Show/hide
Query:  NLFCLLPPIP--FSSSLAWRTKN-KLNFHCVSGRNSLPILFNFLADFSIHIFRAFAL----------FSDALLRYSLPSTIYSELLLFSNLESN------
        N F    PIP  FSSSLAWRT N +LN H +S  NS+PIL  F  D  I++  +  L          F        +P+ + S    F +L S       
Subjt:  NLFCLLPPIP--FSSSLAWRTKN-KLNFHCVSGRNSLPILFNFLADFSIHIFRAFAL----------FSDALLRYSLPSTIYSELLLFSNLESN------

Query:  -------LYIIAIAFFCGQASK--LCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSA
               L   AI  F G+ S+     CH +LE + + TV  GYVRF+V+ I  A+ ++  E KSA
Subjt:  -------LYIIAIAFFCGQASK--LCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSA

KAG7024643.1 hypothetical protein SDJN02_13461, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-79100Show/hide
Query:  SAVAFPVFNLFCLLPPIPFSSSLAWRTKNKLNFHCVSGRNSLPILFNFLADFSIHIFRAFALFSDALLRYSLPSTIYSELLLFSNLESNLYIIAIAFFCG
        SAVAFPVFNLFCLLPPIPFSSSLAWRTKNKLNFHCVSGRNSLPILFNFLADFSIHIFRAFALFSDALLRYSLPSTIYSELLLFSNLESNLYIIAIAFFCG
Subjt:  SAVAFPVFNLFCLLPPIPFSSSLAWRTKNKLNFHCVSGRNSLPILFNFLADFSIHIFRAFALFSDALLRYSLPSTIYSELLLFSNLESNLYIIAIAFFCG

Query:  QASKLCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESASQ
        QASKLCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESASQ
Subjt:  QASKLCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESASQ

KAG7031699.1 hypothetical protein SDJN02_05740, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-0737.25Show/hide
Query:  NLFCLLPPIP--FSSSLAWRTKN-KLNFHCVSGRNSLPILFNFLADFSIHIFRAFAL----------FSDALLRYSLPSTIYSELLLFSNLESNLYIIAI
        N F    PIP  FSSSLAWRT N +LN H +S  NS+PIL  F  D  I++  +  L          F        +P+ + S    F +L S L   AI
Subjt:  NLFCLLPPIP--FSSSLAWRTKN-KLNFHCVSGRNSLPILFNFLADFSIHIFRAFAL----------FSDALLRYSLPSTIYSELLLFSNLESNLYIIAI

Query:  AFFCGQASK--LCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSA
          F G+ S+     CH +LE + + TV  GY RF+V+ I  A+ ++  E KSA
Subjt:  AFFCGQASK--LCGCHSELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSA

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTGCTGTTGCATTCCCAGTATTCAATCTCTTCTGTTTGCTTCCTCCAATTCCCTTCTCGTCCTCTCTCGCATGGCGGACTAAGAACAAACTCAATTTCCATTGCGTCTC
CGGCCGAAATTCTCTCCCCATTCTCTTCAACTTCTTAGCCGATTTCTCTATACATATCTTCCGAGCTTTTGCATTATTCTCGGACGCATTGTTGCGATACAGCCTTCCTT
CCACTATTTACTCGGAACTTCTTTTGTTTTCGAATCTGGAATCGAATCTTTACATCATTGCCATTGCGTTCTTTTGCGGCCAGGCTTCGAAACTTTGCGGTTGTCATTCT
GAATTAGAGCTCACTACTGATTTCACTGTCATGCATGGATATGTCCGGTTTGTAGTTGTTATGATTTATAAGGCAGATTTTGTTGTCGGTGGAGAATATAAGTCTGCAAG
CAGGGCGGAGTCTGCAAGTCAGTAG
mRNA sequenceShow/hide mRNA sequence
AGTGCTGTTGCATTCCCAGTATTCAATCTCTTCTGTTTGCTTCCTCCAATTCCCTTCTCGTCCTCTCTCGCATGGCGGACTAAGAACAAACTCAATTTCCATTGCGTCTC
CGGCCGAAATTCTCTCCCCATTCTCTTCAACTTCTTAGCCGATTTCTCTATACATATCTTCCGAGCTTTTGCATTATTCTCGGACGCATTGTTGCGATACAGCCTTCCTT
CCACTATTTACTCGGAACTTCTTTTGTTTTCGAATCTGGAATCGAATCTTTACATCATTGCCATTGCGTTCTTTTGCGGCCAGGCTTCGAAACTTTGCGGTTGTCATTCT
GAATTAGAGCTCACTACTGATTTCACTGTCATGCATGGATATGTCCGGTTTGTAGTTGTTATGATTTATAAGGCAGATTTTGTTGTCGGTGGAGAATATAAGTCTGCAAG
CAGGGCGGAGTCTGCAAGTCAGTAG
Protein sequenceShow/hide protein sequence
SAVAFPVFNLFCLLPPIPFSSSLAWRTKNKLNFHCVSGRNSLPILFNFLADFSIHIFRAFALFSDALLRYSLPSTIYSELLLFSNLESNLYIIAIAFFCGQASKLCGCHS
ELELTTDFTVMHGYVRFVVVMIYKADFVVGGEYKSASRAESASQ