; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03079 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03079
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L13, chloroplastic-like
Genome locationCarg_Chr09:3393849..3396920
RNA-Seq ExpressionCarg03079
SyntenyCarg03079
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0016020 - membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591772.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-11592.95Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNG KSNRGIPRKSFVDGFPLPQSKSYLLPTQ+ ITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

KAG7024651.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-218100Show/hide
Query:  MDCETKKRKNPEQGARESETKPKSNRCATGFRSDNPETQKAEFPQFGRVDNRESESANSVSEINPDFGSVRILGFGLVGFDGAGLIASYVWLRQKFATMA
        MDCETKKRKNPEQGARESETKPKSNRCATGFRSDNPETQKAEFPQFGRVDNRESESANSVSEINPDFGSVRILGFGLVGFDGAGLIASYVWLRQKFATMA
Subjt:  MDCETKKRKNPEQGARESETKPKSNRCATGFRSDNPETQKAEFPQFGRVDNRESESANSVSEINPDFGSVRILGFGLVGFDGAGLIASYVWLRQKFATMA

Query:  MLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKA
        MLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKA
Subjt:  MLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKA

Query:  VDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAV
        VDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAV
Subjt:  VDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAV

Query:  RGMLPKGRVSDSDYLSAISYHIHVYDSANRIFMGGRGIAKVLGNDPFRKIMSKEMQQKSSSNSSPMGFTASDSHISCANGSHVL
        RGMLPKGRVSDSDYLSAISYHIHVYDSANRIFMGGRGIAKVLGNDPFRKIMSKEMQQKSSSNSSPMGFTASDSHISCANGSHVL
Subjt:  RGMLPKGRVSDSDYLSAISYHIHVYDSANRIFMGGRGIAKVLGNDPFRKIMSKEMQQKSSSNSSPMGFTASDSHISCANGSHVL

XP_022935984.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]2.0e-11592.51Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNG KSNRGIPRKSFVDGFPLPQSKSYLLPTQ+ ITLNSQSKSSG+QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

XP_022976844.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]7.1e-11391.19Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNG KSNRGI RKSFVDGF LPQSKSYLLPTQ+ ITLNSQSKSS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

XP_023536479.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]3.8e-11492.54Show/hide
Query:  MAMLCA-SSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWY
        MAMLCA SSSTPTFFVHSTLNNG KSNRGIPRKSFVDGFPLPQSKSYLLPTQ+ ITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWY
Subjt:  MAMLCA-SSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWY

Query:  PKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIE
        PKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIE
Subjt:  PKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIE

Query:  HAVRGMLPKGRVSDSDYLSAISYHIHVY
        HAVRGMLPKGR+       A+  H+ VY
Subjt:  HAVRGMLPKGRVSDSDYLSAISYHIHVY

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein1.1e-10081.94Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL NG  SN+  PR S +  FPLP SKS  L TQ+ I+L S SK S +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like9.7e-11692.51Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNG KSNRGIPRKSFVDGFPLPQSKSYLLPTQ+ ITLNSQSKSSG+QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like7.2e-10384.58Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNN   SNR IPR S V GFPLPQSKS  L TQ+ ITL S+ KSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

A0A6J1IPT4 50S ribosomal protein L13, chloroplastic-like3.4e-11391.19Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNG KSNRGI RKSFVDGF LPQSKSYLLPTQ+ ITLNSQSKSS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like1.2e-10284.58Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HST NN   SNR IPRKS V GFPLPQSKS  L TQ+ ITL S+ KSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRVSDSDYLSAISYHIHVY
        AVRGMLPKGR+       A+  H+ VY
Subjt:  AVRGMLPKGRVSDSDYLSAISYHIHVY

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L131.3e-3768.42Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEKVAV+G+KRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPK
        ERIIEHAV+GMLPK
Subjt:  ERIIEHAVRGMLPK

P12629 50S ribosomal protein L13, chloroplastic2.0e-6272.96Show/hide
Query:  LDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLY
        +  VPL+QRWMF  +E  GPDIWN TWYPK+ DHV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+KVAVSG+KRTQKLY
Subjt:  LDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLY

Query:  RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRVSDSDYLSAISYHIHVYDSA
        RRHSGRPGG+  ETFDQLQ+RIPERIIEHAVRGMLPKGR+        +  H+ VY  A
Subjt:  RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRVSDSDYLSAISYHIHVYDSA

Q3MF94 50S ribosomal protein L131.7e-3769.3Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEKVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPK
        ERI+EHAV+GMLPK
Subjt:  ERIIEHAVRGMLPK

Q8YPK6 50S ribosomal protein L135.1e-3768.42Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNA+KVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPK
        ERI+EHAV+GMLPK
Subjt:  ERIIEHAVRGMLPK

Q9SYL9 50S ribosomal protein L13, chloroplastic1.0e-6961.21Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L++    + G  RKS   GF L    + +      + + + SK  G+QV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRVSDSDYLSAISYHIHVY
        RI+EHAVRGMLPKGR+       A+  H+ VY
Subjt:  RIIEHAVRGMLPKGRVSDSDYLSAISYHIHVY

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein7.2e-7161.21Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L++    + G  RKS   GF L    + +      + + + SK  G+QV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRVSDSDYLSAISYHIHVY
        RI+EHAVRGMLPKGR+       A+  H+ VY
Subjt:  RIIEHAVRGMLPKGRVSDSDYLSAISYHIHVY

AT3G01790.1 Ribosomal protein L13 family protein6.6e-1637.3Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   +
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV

Query:  SDSDYLSAISYHIHVYDSANRIFMGG
         D              D   RIF GG
Subjt:  SDSDYLSAISYHIHVYDSANRIFMGG

AT3G01790.2 Ribosomal protein L13 family protein6.6e-1637.3Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   +
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRV

Query:  SDSDYLSAISYHIHVYDSANRIFMGG
         D              D   RIF GG
Subjt:  SDSDYLSAISYHIHVYDSANRIFMGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTGAGACAAAAAAAAGAAAGAATCCCGAACAAGGAGCCAGGGAGAGTGAAACCAAACCAAAATCAAACCGATGCGCAACTGGGTTTAGATCCGATAATCCTGA
AACCCAAAAGGCTGAATTTCCGCAATTCGGGCGGGTCGACAATCGCGAGAGCGAATCGGCGAATTCTGTAAGCGAAATCAACCCAGATTTTGGATCCGTCAGGATTTTGG
GTTTTGGGTTGGTTGGATTCGATGGGGCGGGGTTGATCGCGAGTTATGTGTGGCTCCGGCAGAAATTCGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACT
TTCTTTGTACATTCCACTCTTAACAATGGGGGCAAAAGTAACAGAGGCATTCCCAGAAAGTCATTCGTTGATGGGTTTCCACTCCCACAATCAAAATCTTATTTGCTTCC
AACTCAGTCCATGATTACTCTGAATTCTCAGTCGAAGAGTTCGGGCATTCAAGTGCGAGCTCAGGAGCTGGATCGTGTCCCTTTAGAACAGCGGTGGATGTTCGAGGGGG
ACGAACTCGATGGCCCTGACATATGGAACAAAACATGGTACCCGAAGGCTGTAGATCATGTGAACACAGAAAAACCTTGGTATGTGGTTGATGCCACTGATAAGATATTG
GGAAGATTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTACACTCCTAGTGTGGACATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGT
TGCCGTGTCGGGTAGAAAGAGGACACAAAAACTATACCGGAGGCATTCGGGGCGACCAGGTGGTATGACAGTAGAAACTTTTGACCAGCTACAACAGAGAATTCCTGAAA
GAATTATCGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGGTAAGCGATTCCGACTACTTAAGTGCTATATCGTATCATATACATGTATACGACTCTGCAAACAGA
ATATTTATGGGTGGTAGAGGGATTGCTAAAGTTTTGGGCAACGATCCATTTAGGAAAATTATGTCAAAAGAGATGCAGCAAAAGAGTTCCTCGAACTCGTCACCAATGGG
GTTTACAGCTTCCGATTCCCATATAAGTTGTGCCAATGGTTCTCACGTTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTGAGACAAAAAAAAGAAAGAATCCCGAACAAGGAGCCAGGGAGAGTGAAACCAAACCAAAATCAAACCGATGCGCAACTGGGTTTAGATCCGATAATCCTGA
AACCCAAAAGGCTGAATTTCCGCAATTCGGGCGGGTCGACAATCGCGAGAGCGAATCGGCGAATTCTGTAAGCGAAATCAACCCAGATTTTGGATCCGTCAGGATTTTGG
GTTTTGGGTTGGTTGGATTCGATGGGGCGGGGTTGATCGCGAGTTATGTGTGGCTCCGGCAGAAATTCGCTACAATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACT
TTCTTTGTACATTCCACTCTTAACAATGGGGGCAAAAGTAACAGAGGCATTCCCAGAAAGTCATTCGTTGATGGGTTTCCACTCCCACAATCAAAATCTTATTTGCTTCC
AACTCAGTCCATGATTACTCTGAATTCTCAGTCGAAGAGTTCGGGCATTCAAGTGCGAGCTCAGGAGCTGGATCGTGTCCCTTTAGAACAGCGGTGGATGTTCGAGGGGG
ACGAACTCGATGGCCCTGACATATGGAACAAAACATGGTACCCGAAGGCTGTAGATCATGTGAACACAGAAAAACCTTGGTATGTGGTTGATGCCACTGATAAGATATTG
GGAAGATTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTACACTCCTAGTGTGGACATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGT
TGCCGTGTCGGGTAGAAAGAGGACACAAAAACTATACCGGAGGCATTCGGGGCGACCAGGTGGTATGACAGTAGAAACTTTTGACCAGCTACAACAGAGAATTCCTGAAA
GAATTATCGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGGTAAGCGATTCCGACTACTTAAGTGCTATATCGTATCATATACATGTATACGACTCTGCAAACAGA
ATATTTATGGGTGGTAGAGGGATTGCTAAAGTTTTGGGCAACGATCCATTTAGGAAAATTATGTCAAAAGAGATGCAGCAAAAGAGTTCCTCGAACTCGTCACCAATGGG
GTTTACAGCTTCCGATTCCCATATAAGTTGTGCCAATGGTTCTCACGTTCTATAA
Protein sequenceShow/hide protein sequence
MDCETKKRKNPEQGARESETKPKSNRCATGFRSDNPETQKAEFPQFGRVDNRESESANSVSEINPDFGSVRILGFGLVGFDGAGLIASYVWLRQKFATMAMLCASSSTPT
FFVHSTLNNGGKSNRGIPRKSFVDGFPLPQSKSYLLPTQSMITLNSQSKSSGIQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDKIL
GRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRVSDSDYLSAISYHIHVYDSANR
IFMGGRGIAKVLGNDPFRKIMSKEMQQKSSSNSSPMGFTASDSHISCANGSHVL