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Carg03125 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03125
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDihydrolipoyllysine-residue succinyltransferase
Genome locationCarg_Chr20:2983202..2986166
RNA-Seq ExpressionCarg03125
SyntenyCarg03125
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010740.1 hypothetical protein SDJN02_27536, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-95100Show/hide
Query:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEKHFQSRGKMIKKKSLKK
        MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEKHFQSRGKMIKKKSLKK
Subjt:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEKHFQSRGKMIKKKSLKK

Query:  LPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMKSVPRSCFVVVPVNRNAETMNFAEIEKENNVLFAYPSRS
        LPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMKSVPRSCFVVVPVNRNAETMNFAEIEKENNVLFAYPSRS
Subjt:  LPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMKSVPRSCFVVVPVNRNAETMNFAEIEKENNVLFAYPSRS

XP_022986385.1 uncharacterized protein LOC111484139 isoform X1 [Cucurbita maxima]1.7e-3278.3Show/hide
Query:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
        GNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK+  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
Subjt:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN

Query:  ETIMMK
        ETIMMK
Subjt:  ETIMMK

XP_022986388.1 uncharacterized protein LOC111484139 isoform X2 [Cucurbita maxima]1.1e-2977.23Show/hide
Query:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
        GNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK+  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
Subjt:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN

Query:  E
        E
Subjt:  E

XP_022986390.1 uncharacterized protein LOC111484139 isoform X4 [Cucurbita maxima]2.3e-4574.34Show/hide
Query:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKK
        MLLFP  HFF      L +  S+ L  SQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK
Subjt:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKK

Query:  KSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK
        +  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK
Subjt:  KSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK

XP_023512503.1 uncharacterized protein LOC111777232 isoform X2 [Cucurbita pepo subsp. pepo]7.3e-3176.7Show/hide
Query:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-HFQSRGKMIKKKSLK
        MLLFP AHFFS YCAVL+AFDSLALQDSQRTRLVYQRQRQQRLQRRG+WCQLTAEEGET+KP TRIATIS SGEGVAQDA FEK   Q+     ++   K
Subjt:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-HFQSRGKMIKKKSLK

Query:  KLP
        ++P
Subjt:  KLP

TrEMBL top hitse value%identityAlignment
A0A2I4DXA6 Dihydrolipoyllysine-residue succinyltransferase1.7e-0437.11Show/hide
Query:  QLTAEEGETSKPSTRIATISKSGEGVAQDASFEKHFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK
        +  A+EG+T +P T+IA ISKS EGVAQ A  EK  +     +   + +K+   + K  T  +    K++FS    H A EPQLPPK+ +    M +
Subjt:  QLTAEEGETSKPSTRIATISKSGEGVAQDASFEKHFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK

A0A6J1JAY5 uncharacterized protein LOC111484139 isoform X18.4e-3378.3Show/hide
Query:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
        GNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK+  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
Subjt:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN

Query:  ETIMMK
        ETIMMK
Subjt:  ETIMMK

A0A6J1JDX8 uncharacterized protein LOC111484139 isoform X41.1e-4574.34Show/hide
Query:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKK
        MLLFP  HFF      L +  S+ L  SQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK
Subjt:  MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKK

Query:  KSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK
        +  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK
Subjt:  KSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMK

A0A6J1JFX9 uncharacterized protein LOC111484139 isoform X31.0e-0994.74Show/hide
Query:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK
        GNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK
Subjt:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK

A0A6J1JGC9 uncharacterized protein LOC111484139 isoform X25.1e-3077.23Show/hide
Query:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
        GNWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK+  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN
Subjt:  GNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEK-----HFQSRGKMIKKKSLKKLPYSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKN

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTCTTCCCTCTCGCACATTTCTTTTCTTGTTATTGCGCTGTGCTCAATGCATTCGATTCACTTGCTCTGCAGGATAGTCAGCGTACAAGGTTGGTCTACCAGCG
TCAGCGACAACAAAGGCTTCAAAGAAGAGGCAATTGGTGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCCACTATTTCGAAATCGGGTG
AAGGGGTAGCTCAAGATGCTTCATTCGAAAAGCACTTCCAAAGCAGAGGGAAAATGATAAAAAAGAAATCCCTAAAGAAGCTTCCATATTCCAGGGCAAAACAAAGAACC
GTCTCTCTCAAAATCAACTGCAAAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAGACCATCATGATGAA
GTCTGTACCAAGGTCTTGTTTTGTTGTGGTGCCCGTCAATCGCAATGCTGAAACAATGAACTTTGCTGAGATAGAGAAAGAGAACAATGTTTTGTTCGCATATCCATCGA
GGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTCTTCCCTCTCGCACATTTCTTTTCTTGTTATTGCGCTGTGCTCAATGCATTCGATTCACTTGCTCTGCAGGATAGTCAGCGTACAAGGTTGGTCTACCAGCG
TCAGCGACAACAAAGGCTTCAAAGAAGAGGCAATTGGTGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCCACTATTTCGAAATCGGGTG
AAGGGGTAGCTCAAGATGCTTCATTCGAAAAGCACTTCCAAAGCAGAGGGAAAATGATAAAAAAGAAATCCCTAAAGAAGCTTCCATATTCCAGGGCAAAACAAAGAACC
GTCTCTCTCAAAATCAACTGCAAAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAGACCATCATGATGAA
GTCTGTACCAAGGTCTTGTTTTGTTGTGGTGCCCGTCAATCGCAATGCTGAAACAATGAACTTTGCTGAGATAGAGAAAGAGAACAATGTTTTGTTCGCATATCCATCGA
GGTCGTGACTTCAATGCTACGCCATCCATCTTTAATAGGTAATTCGCTCTCTTGATATATGTTCAGAAATTTCAGTAAAACATAGACGGAATGATCTTGGGGAATCAGTG
GGTGGCACGTGAAATAAAATTTACAACCTTAGAGGTGCATAAAAGGATATAGCTGTATATTAATTAA
Protein sequenceShow/hide protein sequence
MLLFPLAHFFSCYCAVLNAFDSLALQDSQRTRLVYQRQRQQRLQRRGNWCQLTAEEGETSKPSTRIATISKSGEGVAQDASFEKHFQSRGKMIKKKSLKKLPYSRAKQRT
VSLKINCKNTFSSSETHTAQEPQLPPKDGKNETIMMKSVPRSCFVVVPVNRNAETMNFAEIEKENNVLFAYPSRS