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Carg03129 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03129
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Genome locationCarg_Chr20:2962507..2962770
RNA-Seq ExpressionCarg03129
SyntenyCarg03129
Gene Ontology termsGO:0007229 - integrin-mediated signaling pathway (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059574.1 hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa]9.0e-3290.91Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDD-NTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSG+YGVEDDD N A+TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ A VGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGDYGVEDDD-NTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

KAG6570886.1 hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3598.84Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVS
        MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKK S
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVS

KAG6604861.1 hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2785.71Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKK
        MGSKAPSWADQWGSG+YGVEDDD   + KKGS NG+SSKKM +VKAAASAGFVKAK+ AAVGAQKVKSGTSVGIKWVKNQYQKK
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKK

KAG7010736.1 hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-36100Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

KAG7034974.1 hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2987.36Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSG+YGVEDDD   + KKGSSNG+SSKKM +VKAAASAGFVKAK+ AAVGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

TrEMBL top hitse value%identityAlignment
A0A0A0LR11 Uncharacterized protein4.4e-3290.91Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDD-NTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSG+YGVEDDD N A+TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ A VGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGDYGVEDDD-NTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

A0A2G5E5C3 Uncharacterized protein1.2e-2172.41Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        M  +APSWADQWGSG YG + +D+   TKKGSS   S KKMAD+K+ ASAG  KAK+AAAVGAQKVKSGTSVGIKW+KNQYQKK SK
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

A0A5C7HG95 Uncharacterized protein6.8e-2579.07Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVS
        MGSKAPSWADQWGSG +G E+DDN  +TKK SS+G SSKKMA+ KAAASAGF KAK+AA+VGAQKVKSGTSVG+KWVK QYQKK S
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVS

A0A5D3DKS5 Uncharacterized protein4.4e-3290.91Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDD-NTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        MGSKAPSWADQWGSG+YGVEDDD N A+TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ A VGAQKVKSGTSVGIKWVKNQYQKKVSK
Subjt:  MGSKAPSWADQWGSGDYGVEDDD-NTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK

V4UEV4 Uncharacterized protein2.7e-2170.93Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVS
        MGSKAPSWADQWG+G +GV+++D+  +TK  SS+G +  K+ +VKAAASAGF KAKSAAAVGAQKVK+GTS GIKWVK QYQKK S
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11740.1 ankyrin repeat family protein5.0e-0434.52Show/hide
Query:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKK
        M S+APSWADQWG+G  GV   + T   KK  +   S K  A                   G  K K    +G+ W+KN  Q+K
Subjt:  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKK

AT3G48180.1 unknown protein9.1e-0639.51Show/hide
Query:  SWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
        SWA+QW S      +  ++  T  G   G +S K    K    AG  K K+AA+ G +KVK GTS+G+ WVK++Y K  +K
Subjt:  SWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGAGATTATGGAGTCGAAGACGATGACAACACAGCGATGACGAAGAAAGGGAGCAGCAATGGCAATAG
TAGCAAGAAGATGGCAGATGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGTCTGCTGCAGCAGTTGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCA
TCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGAGATTATGGAGTCGAAGACGATGACAACACAGCGATGACGAAGAAAGGGAGCAGCAATGGCAATAG
TAGCAAGAAGATGGCAGATGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGTCTGCTGCAGCAGTTGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCA
TCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGA
Protein sequenceShow/hide protein sequence
MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAAVGAQKVKSGTSVGIKWVKNQYQKKVSK