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Carg03135 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03135
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamate receptor
Genome locationCarg_Chr20:2927986..2928762
RNA-Seq ExpressionCarg03135
SyntenyCarg03135
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043456.1 glutamate receptor 3.7-like [Cucumis melo var. makuwa]6.1e-0671.43Show/hide
Query:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
        M+M+LPLSLRDSFNSVT VWF+   GK+ +GSAIL FDK+IS
Subjt:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
KAE8652291.1 hypothetical protein Csa_021898 [Cucumis sativus]8.8e-0570Show/hide
Query:  MVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
        M+LPLSLRDSFNSVT VWF+   G++ +GSAIL FDK+IS
Subjt:  MVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
KAG6570882.1 High mobility group B protein 3, partial [Cucurbita argyrosperma subsp. sororia]8.7e-29100Show/hide
Query:  NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRR
        NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRR
Subjt:  NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRR
KAG7010730.1 hypothetical protein SDJN02_27526, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-70100Show/hide
Query:  NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRRKFMKPIFLIEPEIDWCSQFILTQLETMRMV
        NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRRKFMKPIFLIEPEIDWCSQFILTQLETMRMV
Subjt:  NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRRKFMKPIFLIEPEIDWCSQFILTQLETMRMV

Query:  LPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
        LPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
Subjt:  LPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
TYK24226.1 glutamate receptor 3.7-like [Cucumis melo var. makuwa]1.4e-0570.73Show/hide
Query:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEI
        M+M+LPLSLRDSFNSVT VWF+   GK+ +GSAIL FDK+I
Subjt:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEI
TrEMBL top hitse value%identityAlignment
A0A5A7TN37 Glutamate receptor2.9e-0671.43Show/hide
Query:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
        M+M+LPLSLRDSFNSVT VWF+   GK+ +GSAIL FDK+IS
Subjt:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEIS
A0A5D3DKR7 Glutamate receptor6.5e-0670.73Show/hide
Query:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEI
        M+M+LPLSLRDSFNSVT VWF+   GK+ +GSAIL FDK+I
Subjt:  MRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTTAGCAGCTGTTTCTACATTTGCAAATAGGAGAAACATTTTAGCTACATACTATAATGCCGCTAGTGAACTTTTGAATCTTGTTATAAGACAAAAAGAAGGGAGTAA
CTTACAGATGCTGAGAAGGTGGACCTGGCTAAGGAAGAGCAATGGATTTGAAGAAGCCATTGTTAAAAGCTCGCCAAAAGCAATAGAAATCATAAGAAGGAAGTTCATGA
AACCCATTTTCCTCATCGAACCAGAAATTGATTGGTGTAGTCAATTCATTCTTACCCAGTTGGAAACGATGCGAATGGTCCTCCCACTGTCGCTACGCGATTCTTTTAAT
TCAGTGACTGAAGTGTGGTTCAATGGCTCACGAGGAAAAAAACTCTACGGTTCAGCGATTCTCCGCTTTGACAAGGAAATCAGTTAA
mRNA sequenceShow/hide mRNA sequence
AACTTAGCAGCTGTTTCTACATTTGCAAATAGGAGAAACATTTTAGCTACATACTATAATGCCGCTAGTGAACTTTTGAATCTTGTTATAAGACAAAAAGAAGGGAGTAA
CTTACAGATGCTGAGAAGGTGGACCTGGCTAAGGAAGAGCAATGGATTTGAAGAAGCCATTGTTAAAAGCTCGCCAAAAGCAATAGAAATCATAAGAAGGAAGTTCATGA
AACCCATTTTCCTCATCGAACCAGAAATTGATTGGTGTAGTCAATTCATTCTTACCCAGTTGGAAACGATGCGAATGGTCCTCCCACTGTCGCTACGCGATTCTTTTAAT
TCAGTGACTGAAGTGTGGTTCAATGGCTCACGAGGAAAAAAACTCTACGGTTCAGCGATTCTCCGCTTTGACAAGGAAATCAGTTAA
Protein sequenceShow/hide protein sequence
NLAAVSTFANRRNILATYYNAASELLNLVIRQKEGSNLQMLRRWTWLRKSNGFEEAIVKSSPKAIEIIRRKFMKPIFLIEPEIDWCSQFILTQLETMRMVLPLSLRDSFN
SVTEVWFNGSRGKKLYGSAILRFDKEIS