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Carg03147 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03147
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB box-type domain-containing protein
Genome locationCarg_Chr20:2864080..2864472
RNA-Seq ExpressionCarg03147
SyntenyCarg03147
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042428.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]3.3e-4670.21Show/hide
Query:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG
        MCRGV E         SH    GGCR+    +KG  SA G V+MCELC+S+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLT KYLMG
Subjt:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG

Query:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TST+VLLPTI+ C +  NDCN+N NL+TCCSV LK P LFL
Subjt:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

KAG6570870.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]1.7e-71100Show/hide
Query:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV
        MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV
Subjt:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV

Query:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
Subjt:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

TYK13446.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]3.3e-4670.21Show/hide
Query:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG
        MCRGV E         SH    GGCR+    +KG  SA G V+MCELC+S+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLT KYLMG
Subjt:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG

Query:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TST+VLLPTI+ C +  NDCN+N NL+TCCSV LK P LFL
Subjt:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

XP_022986418.1 B-box domain protein 30-like [Cucurbita maxima]3.1e-6895.38Show/hide
Query:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV
        MCRGVVEQRSHGGCR+FSAAEKGGDSAEGAVVMCELC+SRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLTHKYLMGTSTQVLLPTIV
Subjt:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV

Query:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TC+QPPNDCN NRNL+TCCSVRLKTPVLFL
Subjt:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

XP_023512381.1 B-box domain protein 31-like [Cucurbita pepo subsp. pepo]1.9e-7098.46Show/hide
Query:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV
        MCRGVVEQRSHGGCREFSAAEKGGDSAEGAV+MCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQ LTHKYLMGTSTQVLLPTIV
Subjt:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV

Query:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
Subjt:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

TrEMBL top hitse value%identityAlignment
A0A0A0LTB0 B box-type domain-containing protein1.0e-4571.32Show/hide
Query:  MCRGVVEQRSHG------GCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQV
        MCRG VE+ +HG      GCR+    +KG  SA G VVMCELC+S+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLT KYLMGTST+V
Subjt:  MCRGVVEQRSHG------GCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQV

Query:  LLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        LLPTI+ C +  NDCN+N N + CCSV  K P LFL
Subjt:  LLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

A0A2C9UPR0 B box-type domain-containing protein9.7e-3659.85Show/hide
Query:  MCRGVVEQ-RSHGG-CREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPT
        MCRGV E+  SHG  CR+    E G  +   ++V CELC S+ASLYCQAD+A+LCRKCDKWVHGANFLA RHIRC LCN CQNLT +YL+G ST+++LPT
Subjt:  MCRGVVEQ-RSHGG-CREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPT

Query:  IVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        IV+  +    CN N N    CS  LK P LFL
Subjt:  IVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

A0A5A7TI11 Zinc finger protein CONSTANS-LIKE 141.6e-4670.21Show/hide
Query:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG
        MCRGV E         SH    GGCR+    +KG  SA G V+MCELC+S+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLT KYLMG
Subjt:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG

Query:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TST+VLLPTI+ C +  NDCN+N NL+TCCSV LK P LFL
Subjt:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

A0A5D3CSP7 Zinc finger protein CONSTANS-LIKE 141.6e-4670.21Show/hide
Query:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG
        MCRGV E         SH    GGCR+    +KG  SA G V+MCELC+S+ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLT KYLMG
Subjt:  MCRGVVE-------QRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMG

Query:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TST+VLLPTI+ C +  NDCN+N NL+TCCSV LK P LFL
Subjt:  TSTQVLLPTIVTCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

A0A6J1JGF8 B-box domain protein 30-like1.5e-6895.38Show/hide
Query:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV
        MCRGVVEQRSHGGCR+FSAAEKGGDSAEGAVVMCELC+SRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILC+VCQNLTHKYLMGTSTQVLLPTIV
Subjt:  MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIV

Query:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL
        TC+QPPNDCN NRNL+TCCSVRLKTPVLFL
Subjt:  TCNQPPNDCNDNRNLSTCCSVRLKTPVLFL

SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 141.8e-0747.37Show/hide
Query:  GDSAEGAVVMCELCDSR-ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVC
        G S   +VV CE C  R A L+C+AD A LC  CD+ VH AN L+ +H+R  +C+ C
Subjt:  GDSAEGAVVMCELCDSR-ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVC

O82256 Zinc finger protein CONSTANS-LIKE 131.4e-0743.75Show/hide
Query:  MCELCDSRASL-YCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVL
        +C+ CDS  +L YC+AD A LC  CDK VH AN L  +H R +LC+ C          T   VL
Subjt:  MCELCDSRASL-YCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVL

Q1G3I2 B-box domain protein 304.2e-2047.57Show/hide
Query:  MCRGV---VEQRS-HGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLL
        MCRG     E+RS +GGC+           +  A V CELC   A++YC+AD A+LCRKCD+WVH ANFLA RH+R ++C  C+ LT + L+G +  V+L
Subjt:  MCRGV---VEQRS-HGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLL

Query:  PTI
        P I
Subjt:  PTI

Q9LJB7 B-box zinc finger protein 321.9e-1241.11Show/hide
Query:  VVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTCNQPPNDCNDNRNLSTCCS
        V  CELC + A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LT  ++ G     LLP       P   C    + S+CCS
Subjt:  VVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTCNQPPNDCNDNRNLSTCCS

Q9LRM4 B-box domain protein 312.2e-2146.79Show/hide
Query:  MCRGVVEQRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGT-STQVL
        MCRG+  + S     GGCR          +     V CELCD  AS++C+AD A+LCRKCD+WVHGANFLA RH+R +LC  CQ LT + L+G     V+
Subjt:  MCRGVVEQRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGT-STQVL

Query:  LPTIVTCNQ
        LP++ T  +
Subjt:  LPTIVTCNQ

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 321.4e-1341.11Show/hide
Query:  VVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTCNQPPNDCNDNRNLSTCCS
        V  CELC + A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LT  ++ G     LLP       P   C    + S+CCS
Subjt:  VVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTCNQPPNDCNDNRNLSTCCS

AT3G21890.1 B-box type zinc finger family protein1.6e-2246.79Show/hide
Query:  MCRGVVEQRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGT-STQVL
        MCRG+  + S     GGCR          +     V CELCD  AS++C+AD A+LCRKCD+WVHGANFLA RH+R +LC  CQ LT + L+G     V+
Subjt:  MCRGVVEQRSH----GGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGT-STQVL

Query:  LPTIVTCNQ
        LP++ T  +
Subjt:  LPTIVTCNQ

AT4G15248.1 B-box type zinc finger family protein3.0e-2147.57Show/hide
Query:  MCRGV---VEQRS-HGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLL
        MCRG     E+RS +GGC+           +  A V CELC   A++YC+AD A+LCRKCD+WVH ANFLA RH+R ++C  C+ LT + L+G +  V+L
Subjt:  MCRGV---VEQRS-HGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLL

Query:  PTI
        P I
Subjt:  PTI

AT4G27310.1 B-box type zinc finger family protein1.5e-1256Show/hide
Query:  CELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLT
        C+LC+  A +YC++D A LC  CD  VHGANFL  +H RC+LC+ CQ+LT
Subjt:  CELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLT

AT5G54470.1 B-box type zinc finger family protein2.6e-1247.83Show/hide
Query:  CELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTC
        CELC   A +YC++D A LC  CD  VHGANFL  +H+RC+LC+ CQ+ T     G +   L PT+  C
Subjt:  CELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGAGGAGTGGTGGAACAGAGGAGCCACGGTGGTTGCCGGGAGTTTTCGGCGGCTGAGAAGGGTGGTGATTCGGCGGAGGGTGCGGTGGTGATGTGCGAGCTCTG
TGACTCGAGGGCTTCATTGTACTGCCAAGCGGATGATGCTTATTTATGTAGGAAATGTGACAAGTGGGTTCATGGTGCTAATTTCTTAGCTCTCAGGCATATTAGGTGCA
TTCTCTGTAATGTTTGCCAAAACCTTACCCATAAATACCTCATGGGAACCTCTACTCAGGTGCTTCTCCCCACCATCGTCACCTGCAACCAACCTCCTAATGACTGCAAC
GACAATCGCAATCTTAGCACATGTTGTTCTGTAAGGCTCAAAACGCCTGTTCTCTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAGAGGAGTGGTGGAACAGAGGAGCCACGGTGGTTGCCGGGAGTTTTCGGCGGCTGAGAAGGGTGGTGATTCGGCGGAGGGTGCGGTGGTGATGTGCGAGCTCTG
TGACTCGAGGGCTTCATTGTACTGCCAAGCGGATGATGCTTATTTATGTAGGAAATGTGACAAGTGGGTTCATGGTGCTAATTTCTTAGCTCTCAGGCATATTAGGTGCA
TTCTCTGTAATGTTTGCCAAAACCTTACCCATAAATACCTCATGGGAACCTCTACTCAGGTGCTTCTCCCCACCATCGTCACCTGCAACCAACCTCCTAATGACTGCAAC
GACAATCGCAATCTTAGCACATGTTGTTCTGTAAGGCTCAAAACGCCTGTTCTCTTTTTGTGA
Protein sequenceShow/hide protein sequence
MCRGVVEQRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTCNQPPNDCN
DNRNLSTCCSVRLKTPVLFL