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Carg03150 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03150
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF1218)
Genome locationCarg_Chr20:2852477..2853694
RNA-Seq ExpressionCarg03150
SyntenyCarg03150
Gene Ontology termsGO:0009855 - determination of bilateral symmetry (biological process)
GO:0010087 - phloem or xylem histogenesis (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0010588 - cotyledon vascular tissue pattern formation (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570866.1 hypothetical protein SDJN03_29781, partial [Cucurbita argyrosperma subsp. sororia]1.9e-80100Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

XP_008455827.1 PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo]5.4e-7590.51Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+LGLAH+IANLLGGCNCICSQ+ LEKSPPN+QIS+ACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAV MS+LVIGA+GNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

XP_022944616.1 uncharacterized protein LOC111449022 [Cucurbita moschata]5.6e-8098.73Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQIS+ACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAVAMS+LVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

XP_022986396.1 uncharacterized protein LOC111484145 [Cucurbita maxima]4.0e-7897.47Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQIS+ACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAVAMS+LVIGALGNNKSRASCGFTHHHFLSIGGILCFVHG F VAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

XP_023512382.1 uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo]4.3e-8099.37Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAVAMS+LVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

TrEMBL top hitse value%identityAlignment
A0A0A0LR43 Uncharacterized protein3.4e-7589.87Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+LGLAH+IANLLGGCNCICSQ+ LEKSPPN+QIS+ACL+FT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAV MS+LVIGA+GNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

A0A1S3C1S7 uncharacterized protein LOC1034959272.6e-7590.51Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+LGLAH+IANLLGGCNCICSQ+ LEKSPPN+QIS+ACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAV MS+LVIGA+GNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

A0A6J1CID0 uncharacterized protein LOC111011214 isoform X22.5e-7084.18Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MK+VGVL+CLLVVAMDIVAGLLGIEA+IAQNKVK LRLWIFECR+PS QA++LGL AAG+LGLAH+IANLLGGCNCICSQE ++KSPPN+Q+S+ACL+FT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAV MS+LVIG L NNKSRASCGFTHHHFLSIGGILCFVH LFCVAYYV+ATA E
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

A0A6J1FUW3 uncharacterized protein LOC1114490222.7e-8098.73Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQIS+ACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAVAMS+LVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

A0A6J1JAZ6 uncharacterized protein LOC1114841451.9e-7897.47Show/hide
Query:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT
        MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQIS+ACLVFT
Subjt:  MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFT

Query:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        WIILAVAMS+LVIGALGNNKSRASCGFTHHHFLSIGGILCFVHG F VAYYVTATAAE
Subjt:  WIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)8.1e-2138.46Show/hide
Query:  VLVCL-LVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNK---QISVACLVFTW
        ++VC+ L V +DIVAG +G++A  AQ  VK+ +L   EC+ PS  A+ LG+ A   L  AHV AN++ GC+     +AL   P NK     ++ACL   W
Subjt:  VLVCL-LVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNK---QISVACLVFTW

Query:  IILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA
        ++      +L  G   N +SR  C FT++H  SIGG +CF+H +    YY+++  A
Subjt:  IILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA

AT1G11500.1 Protein of unknown function (DUF1218)7.1e-2541.36Show/hide
Query:  VGVLVCLLVVAMDIVAGLLGIEADIAQNKV------KNLRLWIFEC-RDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVAC
        +G LV ++++  DI A +LGIEA+IAQ+K       ++ R     C R PS  A+  G+AA  +L + HV+AN+LGGC  I S++  +++  NK ++VA 
Subjt:  VGVLVCLLVVAMDIVAGLLGIEADIAQNKV------KNLRLWIFEC-RDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVAC

Query:  LVFTWIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        LV +WI   V+ S L+IG L N+++   C   H  F  IGGI C  HG+   AYYV+A AA+
Subjt:  LVFTWIILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

AT2G32280.1 Protein of unknown function (DUF1218)1.9e-5763.06Show/hide
Query:  KLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTW
        K+ G+LVCL++V +D+ A +LGI+A++AQN+VK++RLW+FECR+PS  A+RLGL AA +L +AHV+ NL+GGC CICSQ+  ++S   +QIS+ACLV TW
Subjt:  KLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTW

Query:  IILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE
        I+ AV    +VIG + N+KSR+SCGFTHHHFLSIGGILCF+H LFCVAYYV+ATAA+
Subjt:  IILAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE

AT4G21310.1 Protein of unknown function (DUF1218)4.3e-5463.64Show/hide
Query:  VGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTWII
        VG  +C+L++AMD+ AG+LGIEA+IAQNKVK+L++WIFECRDPS  A++ GLAA  +L LAHV AN LGGC C+ S++ LEKS  NKQ++VA L+FTWII
Subjt:  VGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTWII

Query:  LAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA
        LA+A S+L++G + N++SR +CG +HH  LSIGGILCFVHGLF VAYY++ATA+
Subjt:  LAVAMSVLVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTTGGCGTGTTGGTATGTTTGTTGGTGGTGGCCATGGACATCGTGGCCGGCCTACTTGGCATCGAAGCTGATATTGCACAAAACAAGGTGAAGAACCTTCG
GCTATGGATATTCGAGTGCAGAGACCCAAGCGCGCAAGCTTACAGATTGGGATTAGCAGCAGCCGGGGTTTTGGGATTAGCCCACGTAATCGCCAACCTGCTCGGCGGCT
GTAACTGCATTTGCTCGCAAGAAGCGCTCGAAAAATCACCCCCAAACAAGCAAATCTCCGTCGCCTGCCTCGTTTTCACTTGGATAATTCTAGCGGTGGCGATGTCGGTG
TTGGTGATCGGAGCATTGGGGAACAACAAATCCCGAGCATCCTGTGGCTTCACACACCATCACTTCCTGTCGATTGGAGGGATTTTGTGCTTCGTTCATGGCTTGTTTTG
TGTCGCTTATTACGTTACTGCCACTGCTGCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAAGGGAAGGATATGAAGTTGGTTGGCGTGTTGGTATGTTTGTTGGTGGTGGCCATGGACATCGTGGCCGGCCTACTTGGCATCGAAGCTGATATTGCACAAAACAA
GGTGAAGAACCTTCGGCTATGGATATTCGAGTGCAGAGACCCAAGCGCGCAAGCTTACAGATTGGGATTAGCAGCAGCCGGGGTTTTGGGATTAGCCCACGTAATCGCCA
ACCTGCTCGGCGGCTGTAACTGCATTTGCTCGCAAGAAGCGCTCGAAAAATCACCCCCAAACAAGCAAATCTCCGTCGCCTGCCTCGTTTTCACTTGGATAATTCTAGCG
GTGGCGATGTCGGTGTTGGTGATCGGAGCATTGGGGAACAACAAATCCCGAGCATCCTGTGGCTTCACACACCATCACTTCCTGTCGATTGGAGGGATTTTGTGCTTCGT
TCATGGCTTGTTTTGTGTCGCTTATTACGTTACTGCCACTGCTGCTGAGTAGTGGAAGTTGCTTTTGGATTTGATGTCTCATTTCTCCTCTTGTGAGGCATATCAGACAA
AAACTAATGTAATCATTTCTTTTCTTCTCTGTT
Protein sequenceShow/hide protein sequence
MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGVLGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTWIILAVAMSV
LVIGALGNNKSRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE