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Carg03218 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03218
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-responsive protein SAUR50
Genome locationCarg_Chr20:2534665..2535018
RNA-Seq ExpressionCarg03218
SyntenyCarg03218
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570808.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]4.9e-57100Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA
        MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA

Query:  VTVPCRPSELEQILAEE
        VTVPCRPSELEQILAEE
Subjt:  VTVPCRPSELEQILAEE

XP_022944522.1 auxin-responsive protein SAUR50 [Cucurbita moschata]3.3e-53100Show/hide
Query:  MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS
        MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS
Subjt:  MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS

Query:  ELEQILAEE
        ELEQILAEE
Subjt:  ELEQILAEE

XP_022986206.1 auxin-responsive protein SAUR50 [Cucurbita maxima]2.1e-5597.44Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA
        MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQD+FDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGF+HEGA
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA

Query:  VTVPCRPSELEQILAEE
        VTVPCRPSELE ILAEE
Subjt:  VTVPCRPSELEQILAEE

XP_023512258.1 auxin-responsive protein SAUR50 [Cucurbita pepo subsp. pepo]4.9e-57100Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA
        MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA

Query:  VTVPCRPSELEQILAEE
        VTVPCRPSELEQILAEE
Subjt:  VTVPCRPSELEQILAEE

XP_038902788.1 auxin-responsive protein SAUR50-like [Benincasa hispida]2.6e-5087.7Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDY-----DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGF
        M KLVT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ DY     +STPVPEDVKEGHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYGF
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDY-----DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGF

Query:  DHEGAVTVPCRPSELEQILAEE
        DHEGA+TVPCRPSELE+ILAEE
Subjt:  DHEGAVTVPCRPSELEQILAEE

TrEMBL top hitse value%identityAlignment
A0A0A0KGI2 Uncharacterized protein1.8e-4986.18Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDY------DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYG
        M K VT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ DY       STPVPEDVKEGHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDY------DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGAVTVPCRPSELEQILAEE
        FDHEGA+TVPCRPSELE+ILAEE
Subjt:  FDHEGAVTVPCRPSELEQILAEE

A0A1S3CNL2 auxin-responsive protein SAUR32-like1.0e-4784.55Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYD------STPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYG
        M KLVT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ D +      ST VPEDVKEGHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYD------STPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGAVTVPCRPSELEQILAEE
        F+HEGA+TVPCRPSELE+ILAEE
Subjt:  FDHEGAVTVPCRPSELEQILAEE

A0A5D3DFC2 Auxin-responsive protein SAUR32-like1.0e-4784.55Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYD------STPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYG
        M KLVT+A KKNGIVKLK+AVGKLQRSLSLGRRSDSGQD+ D +      ST VPEDVKEGHFAVVAVDAEEPKRF VPLSCLTNPTFLRLLEAAAEEYG
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYD------STPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYG

Query:  FDHEGAVTVPCRPSELEQILAEE
        F+HEGA+TVPCRPSELE+ILAEE
Subjt:  FDHEGAVTVPCRPSELEQILAEE

A0A6J1FVW1 auxin-responsive protein SAUR501.6e-53100Show/hide
Query:  MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS
        MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS
Subjt:  MKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPS

Query:  ELEQILAEE
        ELEQILAEE
Subjt:  ELEQILAEE

A0A6J1JAG6 auxin-responsive protein SAUR501.0e-5597.44Show/hide
Query:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA
        MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQD+FDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGF+HEGA
Subjt:  MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGA

Query:  VTVPCRPSELEQILAEE
        VTVPCRPSELE ILAEE
Subjt:  VTVPCRPSELEQILAEE

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.5e-1143.9Show/hide
Query:  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC
        L+R  SLG+++  G     YD   +P DV +GHF V     E   R+ VP+S LT+P F  LL+ A EE+GFDH+  +T+PC
Subjt:  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC

P0DKL1 Auxin-responsive protein SAUR501.4e-0942.86Show/hide
Query:  DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCR
        D + +P DV +GHF V     E   R+ VP+SCL +PTF  LL+ + EE+GF+H+  + +PC+
Subjt:  DSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCR

P33079 Auxin-induced protein 10A56.3e-0740.91Show/hide
Query:  DVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHE-GAVTVPCRPSELEQILA
        DV +G+ AV   D  + +RF +P+S L  P+F  LL  A EE+G+DH  G +T+PC+  E   + A
Subjt:  DVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHE-GAVTVPCRPSELEQILA

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.4e-0643.1Show/hide
Query:  VPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC
        +P+DV +GHF V         R+ VP+S L +  F  LL  A EE+GFDH+  +T+PC
Subjt:  VPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC

Q9ZUZ3 Auxin-responsive protein SAUR322.6e-0840.3Show/hide
Query:  EDVKEGHFAV-VAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILA
        +DV +G  A+ V    EE +RF VP+    +P F++LL+ A +EYGFD +G +T+PC   E   + A
Subjt:  EDVKEGHFAV-VAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQILA

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family2.5e-1136.96Show/hide
Query:  LQRSLSLGRRSDSGQDD-FDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL
        L+R  SLG++  S  +D  ++D   +P DV +GHF V         R+ +P+S LT P F  LL+ A EE+GFDH   +T+PC     + ++
Subjt:  LQRSLSLGRRSDSGQDD-FDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL

AT2G16580.1 SAUR-like auxin-responsive protein family1.3e-1041.46Show/hide
Query:  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC
        L+R  SLG+++  G     Y+   +P DV +GHF V         R+ VP+S LTN  F  LL  A EE+GFDH+  +T+PC
Subjt:  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC

AT2G28085.1 SAUR-like auxin-responsive protein family3.5e-2150Show/hide
Query:  KKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDA--EEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRP
        K  GIVKLK+ V +L +            +++  D   VP+DVKEGHFAV+AVD   E  +RF VPL  L +P F +LLE A EEYGF H+GA+ VPCRP
Subjt:  KKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDA--EEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRP

Query:  SELEQILAEE
        S L  IL E+
Subjt:  SELEQILAEE

AT3G09870.1 SAUR-like auxin-responsive protein family3.4e-1655.22Show/hide
Query:  VPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL
        +P DVKEGH AV+AV  E  KRF + L  L  P FLRLLE A EE+GF   G +T+PC+P E+++IL
Subjt:  VPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSELEQIL

AT4G34760.1 SAUR-like auxin-responsive protein family1.8e-1243.9Show/hide
Query:  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC
        L+R  SLG+++  G     YD   +P DV +GHF V     E   R+ VP+S LT+P F  LL+ A EE+GFDH+  +T+PC
Subjt:  LQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGG
TCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGT
TGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAAGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTC
GAGCAGATCTTGGCCGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGCTTGTGACCGTAGCCATGAAGAAGAATGGCATTGTCAAGCTCAAGTCCGCCGTTGGGAAGCTGCAGAGAAGCCTCTCCTTAGGTCGGAGGTCTGATTCTGG
TCAAGATGACTTCGATTACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGACATTTTGCAGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGGTTTGCTGTTCCGT
TGAGTTGCTTGACGAATCCGACGTTTTTGAGACTGTTGGAGGCGGCGGCTGAGGAGTATGGATTTGATCATGAAGGTGCAGTGACCGTGCCATGTCGGCCGAGCGAGCTC
GAGCAGATCTTGGCCGAGGAATAG
Protein sequenceShow/hide protein sequence
MTKLVTVAMKKNGIVKLKSAVGKLQRSLSLGRRSDSGQDDFDYDSTPVPEDVKEGHFAVVAVDAEEPKRFAVPLSCLTNPTFLRLLEAAAEEYGFDHEGAVTVPCRPSEL
EQILAEE