; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03246 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03246
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA polymerase epsilon subunit C
Genome locationCarg_Chr20:2362465..2365134
RNA-Seq ExpressionCarg03246
SyntenyCarg03246
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570775.1 Chromatin accessibility complex 16kD protein, partial [Cucurbita argyrosperma subsp. sororia]5.4e-10598.23Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTH--NNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKK
        MASSKKSSSEAKSREAGTSKPAPKNKTH  NNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKK
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTH--NNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKK

Query:  EQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDF
        EQNGYV  EEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDF
Subjt:  EQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDF

Query:  LSDFVPEKLKFEDALKERSMAESGKD
        LSDFVPEKLKFEDALKERSMAESGKD
Subjt:  LSDFVPEKLKFEDALKERSMAESGKD

KAG7010622.1 Chromatin accessibility complex protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-108100Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ
        MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ

Query:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
        NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
Subjt:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

XP_022944557.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita moschata]5.6e-10295.09Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ
        MASSKKSSSEAKS+EAGTSKPAP NKTHNNNARTIDKVYSKKKKVSN+NKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN GKKEQ
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ

Query:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
        NGYV       EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
Subjt:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

XP_022986059.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima]2.4e-10093.07Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTH------NNNARTIDKVYSKKKKV-SNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR
        MASSKKSSSEAKS+EAGTSKPAPKNKTH      NNNAR +DKVYSKKKKV SNNNKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNTSKSKKVKR
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTH------NNNARTIDKVYSKKKKV-SNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR

Query:  NHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKR
        NHGKKE+NGY    EEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKR
Subjt:  NHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKR

Query:  KRYDFLSDFVPEKLKFEDALKERSMAESGKD
        KRYDFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  KRYDFLSDFVPEKLKFEDALKERSMAESGKD

XP_023512055.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita pepo subsp. pepo]6.9e-10093.48Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTH---NNNARTIDKVYSKKKKVS---NNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN
        MASSKKSSSEAKS+EAGTSKPAPKNKTH   NNNARTIDKVYSKKKKVS   NNNKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNT+KSKKVKRN
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTH---NNNARTIDKVYSKKKKVS---NNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN

Query:  HGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK
        HGKKE+NGY EEEEEEEE EE  EEE EEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK
Subjt:  HGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRK

Query:  RYDFLSDFVPEKLKFEDALKERSMAESGKD
        RYDFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  RYDFLSDFVPEKLKFEDALKERSMAESGKD

TrEMBL top hitse value%identityAlignment
A0A1S3CKU7 DNA polymerase epsilon subunit C8.8e-7776.82Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNN-NKHTSNGSVKENEVLPISAPGD--------AEEDRAETTSKSPNTSKSKKV
        MASSKKSS+EAK +EAGTSKPAPK KTH NNAR  DK  SKKKK     +  T+NGSVK+NEVL +S PG         A+ED+AETTS+   TSKSKKV
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNN-NKHTSNGSVKENEVLPISAPGD--------AEEDRAETTSKSPNTSKSKKV

Query:  KRNHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVC
        KRNH K+E NGY EEE          EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAYACCAQDRKKSLAYKHLSSVV 
Subjt:  KRNHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVC

Query:  KRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
        KRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  KRKRYDFLSDFVPEKLKFEDALKERSMAESGKD

A0A6J1FVY8 DNA polymerase epsilon subunit C-like isoform X12.7e-10295.09Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ
        MASSKKSSSEAKS+EAGTSKPAP NKTHNNNARTIDKVYSKKKKVSN+NKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN GKKEQ
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ

Query:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
        NGYV       EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
Subjt:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS

Query:  DFVPEKLKFEDALKERSMAESGKD
        DFVPEKLKFEDALKERSMAESGKD
Subjt:  DFVPEKLKFEDALKERSMAESGKD

A0A6J1FY58 DNA polymerase epsilon subunit C-like isoform X21.7e-8094.09Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ
        MASSKKSSSEAKS+EAGTSKPAP NKTHNNNARTIDKVYSKKKKVSN+NKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRN GKKEQ
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ

Query:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
        NGYV       EEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
Subjt:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL

A0A6J1JCZ8 DNA polymerase epsilon subunit C-like isoform X29.4e-7991.71Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTH------NNNARTIDKVYSKKKKV-SNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR
        MASSKKSSSEAKS+EAGTSKPAPKNKTH      NNNAR +DKVYSKKKKV SNNNKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNTSKSKKVKR
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTH------NNNARTIDKVYSKKKKV-SNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR

Query:  NHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
        NHGKKE+NGY    EEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL
Subjt:  NHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHL

A0A6J1JF10 DNA polymerase epsilon subunit C-like isoform X11.1e-10093.07Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTH------NNNARTIDKVYSKKKKV-SNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR
        MASSKKSSSEAKS+EAGTSKPAPKNKTH      NNNAR +DKVYSKKKKV SNNNKHTSNGSVKENEVLPISAPGDAEEDR ETTSKSPNTSKSKKVKR
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTH------NNNARTIDKVYSKKKKV-SNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKR

Query:  NHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKR
        NHGKKE+NGY    EEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKR
Subjt:  NHGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKR

Query:  KRYDFLSDFVPEKLKFEDALKERSMAESGKD
        KRYDFLSDFVPEKLKFEDALKERSMAESGKD
Subjt:  KRYDFLSDFVPEKLKFEDALKERSMAESGKD

SwissProt top hitse value%identityAlignment
Q6BX14 DNA polymerase epsilon subunit C7.1e-0729.51Show/hide
Query:  SNNNKHTSNGSVKENEVLPISAP--GDAEEDRAETTSKSPNTSKSKKVKRN--HGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDEN
        S NN   +N   + NE    + P   +      E   + PN  +   V  N   G+K Q    E E+++E+EEEE EEE EE+    P+++IKKI + + 
Subjt:  SNNNKHTSNGSVKENEVLPISAP--GDAEEDRAETTSKSPNTSKSKKVKRN--HGKKEQNGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDEN

Query:  SDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD
          L  +Q A++    ATE+F+  F + +      D++K L YK  S+ V  +   +FLSD VP+     + +  + +  +  D
Subjt:  SDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAESGKD

Q9JKP8 Chromatin accessibility complex protein 11.0e-0531.82Show/hide
Query:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK
        E+  ++++   P++RI+ IM+       INQEAL L  KATE+F+      +Y   +   KK+L Y  L+S     +   FL+D +P+K+   K+   LK
Subjt:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK

Query:  ERSMAESGKD
        E+   E   +
Subjt:  ERSMAESGKD

Q9NRG0 Chromatin accessibility complex protein 16.0e-0632.08Show/hide
Query:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK
        ++  E+++   P++RI+ IM+       INQEAL L  KATE+F+      +Y   +   KK L Y  L++   + + + FL+D +P+K+   K+   LK
Subjt:  EEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKL---KFEDALK

Query:  ERSMAE
        E    E
Subjt:  ERSMAE

Q9V452 Chromatin accessibility complex 16kD protein4.6e-0635Show/hide
Query:  PMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLK---FEDALKERSMAESGKD
        P++R++ IM+       I  E LFL+ K TE+F+      AY     Q   ++L Y+HLS VV K K  +FL   VP+K++   F++ L+    A S  D
Subjt:  PMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYA-CCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLK---FEDALKERSMAESGKD

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C101.1e-1837.95Show/hide
Query:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ
        M SSKK   +    +   +K + ++K  +          S+ KK SN      N   K+ E+  IS    +  D  E   +     KS  V    G  + 
Subjt:  MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQ

Query:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS
         G   +  +  EE++   E+A+    KFPMNRI++IMR +NS  +I Q+A+FLVNKATEMF+ +F ++AY    +D+KK + YKHLSSVV   +RY+FL+
Subjt:  NGYVEEEEEEEEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLS

Query:  DFVPEKLKFEDALK--ERSMAESG
        D VPEKLK E AL+  ER M ++G
Subjt:  DFVPEKLKFEDALK--ERSMAESG

AT1G56170.1 nuclear factor Y, subunit C28.9e-0527.88Show/hide
Query:  EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK
        +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P      D LK
Subjt:  EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK

Query:  ERSM
        E  +
Subjt:  ERSM

AT1G56170.2 nuclear factor Y, subunit C28.9e-0527.88Show/hide
Query:  EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK
        +E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ + +   +DFL D +P      D LK
Subjt:  EEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALK

Query:  ERSM
        E  +
Subjt:  ERSM

AT3G48590.1 nuclear factor Y, subunit C14.4e-0427.45Show/hide
Query:  EEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED
        + +E E+  + K ++ P+ RIKKIM+ +     I+ EA  L  KA E+F+++    ++    ++++++L    +++ + +   +DFL D VP +++K E 
Subjt:  EEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVP-EKLKFED

Query:  AL
        A+
Subjt:  AL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTCCAAAAAATCCAGTAGTGAAGCCAAGAGCAGAGAAGCGGGAACTTCAAAACCAGCCCCCAAAAACAAGACCCACAACAACAACGCCAGAACAATCGACAA
GGTTTATTCAAAGAAGAAGAAGGTTAGCAACAACAACAAGCACACTAGCAATGGCTCTGTGAAGGAGAACGAGGTGTTACCCATTTCTGCTCCAGGCGATGCCGAAGAAG
ACAGAGCAGAAACCACGAGTAAATCGCCTAACACCTCCAAATCGAAGAAAGTTAAACGGAACCATGGAAAGAAAGAACAGAATGGTTATGTAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCTGAGGAGAAGATTTACAAATTCCCTATGAATCGGATCAAGAAAATCATGAGGGATGAGAATTCTGATTTGCGCATAAA
TCAGGAAGCTTTGTTTCTCGTCAACAAAGCAACGGAGATGTTTCTTGTGCAATTTTGCAAGGATGCATATGCGTGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACA
AGCATCTATCATCAGTAGTTTGCAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTCCCAGAGAAATTAAAATTTGAAGATGCATTGAAGGAAAGAAGCATGGCAGAA
TCAGGAAAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGTCCAAAAAATCCAGTAGTGAAGCCAAGAGCAGAGAAGCGGGAACTTCAAAACCAGCCCCCAAAAACAAGACCCACAACAACAACGCCAGAACAATCGACAA
GGTTTATTCAAAGAAGAAGAAGGTTAGCAACAACAACAAGCACACTAGCAATGGCTCTGTGAAGGAGAACGAGGTGTTACCCATTTCTGCTCCAGGCGATGCCGAAGAAG
ACAGAGCAGAAACCACGAGTAAATCGCCTAACACCTCCAAATCGAAGAAAGTTAAACGGAACCATGGAAAGAAAGAACAGAATGGTTATGTAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCTGAGGAGAAGATTTACAAATTCCCTATGAATCGGATCAAGAAAATCATGAGGGATGAGAATTCTGATTTGCGCATAAA
TCAGGAAGCTTTGTTTCTCGTCAACAAAGCAACGGAGATGTTTCTTGTGCAATTTTGCAAGGATGCATATGCGTGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACA
AGCATCTATCATCAGTAGTTTGCAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTCCCAGAGAAATTAAAATTTGAAGATGCATTGAAGGAAAGAAGCATGGCAGAA
TCAGGAAAAGACTAGGCTTTTTGATATCTTAATCTAACACTTCATCTTGTTCTGTGGATGTGTTAGGTTTAGGCATCTTTTTTTTGTCATGTCAATGGGAATACATGGAA
GTTAGAACATTCATTTTCCCTCCGTACAGTTCTGTAAGTTTATTAACGACATCTCAGATCTAACATAATTAAACTATTACTTACACAGGGATCTTTTTTCTTCCTGAGCA
AATCCAACAAATCTATTT
Protein sequenceShow/hide protein sequence
MASSKKSSSEAKSREAGTSKPAPKNKTHNNNARTIDKVYSKKKKVSNNNKHTSNGSVKENEVLPISAPGDAEEDRAETTSKSPNTSKSKKVKRNHGKKEQNGYVEEEEEE
EEEEEEAEEEAEEKIYKFPMNRIKKIMRDENSDLRINQEALFLVNKATEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVCKRKRYDFLSDFVPEKLKFEDALKERSMAE
SGKD