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Carg03273 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03273
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein .
Genome locationCarg_Chr20:2195999..2196769
RNA-Seq ExpressionCarg03273
SyntenyCarg03273
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570746.1 Phototropin-1, partial [Cucurbita argyrosperma subsp. sororia]8.6e-78100Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTP
        IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTP
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTP

KAG7010594.1 hypothetical protein SDJN02_27388, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-80100Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN
        IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN

XP_022944431.1 uncharacterized protein LOC111448884 [Cucurbita moschata]3.6e-7697.37Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSI FSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKI
        IKAVYASEFPEAPKYIDHVELAIL GAGMQIASSPLNLTSVG RDL TPGKI
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKI

XP_022986953.1 uncharacterized protein LOC111484535 isoform X1 [Cucurbita maxima]6.2e-7696.08Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSI FSPAQEPQGRCSPEIRSMDDSSGS LPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN
        IKAVYASEFPEAPKYIDHVELAILG AGMQIASSPLNLTSVGARDLRTP  +N
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN

XP_022986954.1 uncharacterized protein LOC111484535 isoform X2 [Cucurbita maxima]4.7e-7697.35Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSI FSPAQEPQGRCSPEIRSMDDSSGS LPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGK
        IKAVYASEFPEAPKYIDHVELAILG AGMQIASSPLNLTSVGARDLRTP K
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGK

TrEMBL top hitse value%identityAlignment
A0A5D3CTN8 Uncharacterized protein1.7e-3962.73Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFS-PAQEPQGRCSPEIRSMDD---SSGSILPVSDP--SCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNL
        MQQR     +FR TTD+HCS+  S  ++EPQG  S    SM+D   ++G +LP+SDP  S RKRD NSRY+F   WIHLIPLILLL+LFILWWSSYP   
Subjt:  MQQRSSTSSSFRATTDDHCSINFS-PAQEPQGRCSPEIRSMDD---SSGSILPVSDP--SCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNL

Query:  VIKDGGIKAVYASE-FPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLR-TPGKIN
        VIKDGGI+A Y  E  PE PKY+DH ELA+LG AGM IASSPLNLTSVG RD R  P KI+
Subjt:  VIKDGGIKAVYASE-FPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLR-TPGKIN

A0A6J1CX54 uncharacterized protein LOC1110153859.1e-4167.76Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDD-SSGSILPVSDP--SCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIK
        MQQRS   S FRA TDDHC I   P QEPQGR SP  RS D    G +LPVSDP    R RDH S Y+ +ERWIHLIPL L LV+FILWW SYPVNL IK
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDD-SSGSILPVSDP--SCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIK

Query:  DGGIKAVYASEFPEAPK-YIDHVELAILGGAGMQIASSPLNLTSVGARDLRT
        D  I  VY  EFPE PK YIDHVELA+LG AGMQIASSPLNLT  GARDL++
Subjt:  DGGIKAVYASEFPEAPK-YIDHVELAILGGAGMQIASSPLNLTSVGARDLRT

A0A6J1FUE4 uncharacterized protein LOC1114488841.7e-7697.37Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSI FSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKI
        IKAVYASEFPEAPKYIDHVELAIL GAGMQIASSPLNLTSVG RDL TPGKI
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKI

A0A6J1JHI4 uncharacterized protein LOC111484535 isoform X22.3e-7697.35Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSI FSPAQEPQGRCSPEIRSMDDSSGS LPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGK
        IKAVYASEFPEAPKYIDHVELAILG AGMQIASSPLNLTSVGARDLRTP K
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGK

A0A6J1JI18 uncharacterized protein LOC111484535 isoform X13.0e-7696.08Show/hide
Query:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        MQQRSSTSSSFRATTDDHCSI FSPAQEPQGRCSPEIRSMDDSSGS LPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
Subjt:  MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN
        IKAVYASEFPEAPKYIDHVELAILG AGMQIASSPLNLTSVGARDLRTP  +N
Subjt:  IKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07860.1 BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07870.2)2.4e-0939Show/hide
Query:  MDDSSGSILPVSDPSCRKRDHNSR---YKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPL
        M + S S LP+S     +R  N+R   +  SE WIH IP+I+ L  F LW  S+ V+ V+ DG I +++  E   A +   HV LAIL  + +  ASS L
Subjt:  MDDSSGSILPVSDPSCRKRDHNSR---YKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPKYIDHVELAILGGAGMQIASSPL

AT1G07870.2 Protein kinase superfamily protein9.0e-0937.25Show/hide
Query:  RSMDDSSGSILPVSDPSCRKRDHNSR---YKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPKYIDHVELAILGGAGMQIASS
        R  DD       V +  C  R  N+R   +  SE WIH IP+I+ L  F LW  S+ V+ V+ DG I +++  E   A +   HV LAIL  + +  ASS
Subjt:  RSMDDSSGSILPVSDPSCRKRDHNSR---YKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFPEAPKYIDHVELAILGGAGMQIASS

Query:  PL
         L
Subjt:  PL

AT2G35658.2 unknown protein3.9e-0434.26Show/hide
Query:  RSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGS--ILPVSDPSCRK-RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG
        R S S+S      D  S N SP+  P     P I++  DS  S  +LP  DP+    + + SR++ +E  IH IP++L+L   ILW  S P N +   G 
Subjt:  RSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGS--ILPVSDPSCRK-RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGG

Query:  IKAVYASE
          +V+  E
Subjt:  IKAVYASE

AT4G16840.1 unknown protein1.1e-0643.66Show/hide
Query:  PAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRK-RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNL
        PA       S  + +M+D    +LP  DP+ +  +   SR++FSE  IHLIPLILLL + ILW SSY   L
Subjt:  PAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRK-RDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGAGATCTTCGACTTCGAGTTCGTTTCGAGCAACAACTGACGATCATTGTAGCATAAACTTCAGCCCGGCACAAGAGCCACAAGGAAGATGCTCTCCAGAAAT
AAGATCAATGGACGATTCCAGCGGCAGCATTCTTCCAGTTTCCGATCCTTCGTGTCGGAAGCGAGATCACAATTCGCGATATAAATTCTCGGAGAGGTGGATTCATTTGA
TTCCTTTGATTCTGCTTCTCGTCCTCTTCATTCTCTGGTGGTCATCTTATCCAGTGAATTTGGTGATCAAGGATGGAGGAATTAAAGCAGTTTATGCAAGTGAGTTTCCG
GAGGCGCCGAAGTACATTGATCATGTCGAACTTGCCATCTTAGGAGGTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCGTTGGCGCTCGAGATTTACG
GACACCGGGTAAGATCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGAGATCTTCGACTTCGAGTTCGTTTCGAGCAACAACTGACGATCATTGTAGCATAAACTTCAGCCCGGCACAAGAGCCACAAGGAAGATGCTCTCCAGAAAT
AAGATCAATGGACGATTCCAGCGGCAGCATTCTTCCAGTTTCCGATCCTTCGTGTCGGAAGCGAGATCACAATTCGCGATATAAATTCTCGGAGAGGTGGATTCATTTGA
TTCCTTTGATTCTGCTTCTCGTCCTCTTCATTCTCTGGTGGTCATCTTATCCAGTGAATTTGGTGATCAAGGATGGAGGAATTAAAGCAGTTTATGCAAGTGAGTTTCCG
GAGGCGCCGAAGTACATTGATCATGTCGAACTTGCCATCTTAGGAGGTGCCGGAATGCAGATTGCTTCGAGTCCTCTGAATCTAACCAGCGTTGGCGCTCGAGATTTACG
GACACCGGGTAAGATCAATTGA
Protein sequenceShow/hide protein sequence
MQQRSSTSSSFRATTDDHCSINFSPAQEPQGRCSPEIRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVIKDGGIKAVYASEFP
EAPKYIDHVELAILGGAGMQIASSPLNLTSVGARDLRTPGKIN